You are here

Home

ATCC64974_28260-T1, ATCC64974_28260-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_28260-T1
Unique NameATCC64974_28260-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:532119..533592-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_28260-T1 ID=ATCC64974_28260-T1|Name=ATCC64974_28260-T1|organism=Aspergillus niger N402|type=mRNA|length=1474bp|location=Sequence derived from alignment at OGUI01000004.1:532119..533592- (Aspergillus niger N402)
ATGTCGGTCCCAAACATCACCACCATCTCCCCCATCACCAACCGTCCCAT
CCTCAACCGCACCGGCGCCAACCCAGAAGACATCGTAGGCATCGCCGAAT
CCGCCCAAGAAGCCTACCGTTCCTTCTCCGAATCCACCACCCTCAAACAA
CGCCAGGACATCGTCACCCGCGCCCTAGACAAGCTTGAAAAGAGAAAAGA
TGACCTCGCCAGACAGATCACCGAGCAAATGGGCCGGCCCATATCATACA
CCGGTGTCGAAGTCGCCACGGCCATCAAGCGCAGCCACTACCTAAACCGC
ATCAGCGACTCCGTCCTCGGCGAAGCGGGCATCGTCCCCGGAGAAGAAGA
ACAGGGCTTCAAGCGCTACATCAAGCGCAAGCCTGTCGGCGTCGTCCTGA
TCATTTTCGCCTGGAATTACCCCTACCTTGTTCTCGTTAACAGCTTAATC
CCCGCCATTTTGGCCGGGAACGCAGTCATTCTGAAACCGTCGCCGCAGAC
ACCGACCATCGCAGAGGAAGTCGCCAATGCGTTTGAAGAAGCGGGCCTTC
CAGAGAACGTGATTCAATATGTGCATTCCGGGTCCCCAACCCTACTGGAG
AGTCTCGTTCGCTCGTCCTGTGTCAATCACATTTGTTTTACGGGCTCTGT
GGAGGGCGGGCTAGCTACGCAGAAAGCGGCCTCTGATCGCATCGTCAACC
TCGGACTGGAACTAGGCGGCAAGGATCCTGCGTATGTGCGCGACGACGTC
GATATCCCCTGGGCGGCGGCGGAGATCGTCGACGGAGCTATCTTCAACAG
TGGGCAGAGCTGCTGCGCTATCGAGCGGGTCTACGTGCATCAGAATATCT
ACGATAAGTTCGTGGCGGAGGTTAAGAAGGTGCTGAGCAATTTCGTGGTT
GGGGACCCGTTCGATAAGAAGACGCAGATCGGGCCTGTGATATCGAAGCG
CGCGAAAGAGGAGATCGAGGCGCATATTGCTGATGCCGTGGAGAAGGGGG
CAAAGGATGAGACGCCGGCGAATGAGACGTTTGAGAATCCTCCGTCTGAG
GGGAATTATGTTAAGCCTACGCTGTTGACGGGGGTAACGCATGAGATGCG
GGTCATGACGGAAGAGACGTTTGGGCCGGTGATTCCGGTTATGAAGGTGG
AGGGGGATGATGAGGCCGTTAAGTGGATGAATAGTAGTGAGTTTGGGCTG
ACAGCTAGTGTGTGGACGAAGGATGTTGCTGCCGCGGAGGAGCTGGTTGA
GCGGGTGGAGGCGGGGACGGTGTTTATCAATCGATCGGATTATCCTAGTC
CGGTGAGTTTGCGCTGTTGATGTTGACAATGATTCTGGAGATGTGCTAAC
GGAGGCATAGGACCTGGCCTGGACAGGCTGGAAGAATTCAGGACGCGGAG
TAACGCTCAGTCGGTTCGGGTTCGAGCAATTCGTCAAGCTGAAGAGTTAC
CATATCAAGGACTATCCCAAATAG
back to top

Coding sequence (CDS) from alignment at OGUI01000004.1:532119..533592-

>ATCC64974_28260-T1 ID=ATCC64974_28260-T1|Name=ATCC64974_28260-T1|organism=Aspergillus niger N402|type=CDS|length=2832bp|location=Sequence derived from alignment at OGUI01000004.1:532119..533592- (Aspergillus niger N402)
GACCTGGCCTGGACAGGCTGGAAGAATTCAGGACGCGGAGTAACGCTCAG
TCGGTTCGGGTTCGAGCAATTCGTCAAGCTGAAGAGTTACCATATCAAGG
ACTATCCCAAATAGATGTCGGTCCCAAACATCACCACCATCTCCCCCATC
ACCAACCGTCCCATCCTCAACCGCACCGGCGCCAACCCAGAAGACATCGT
AGGCATCGCCGAATCCGCCCAAGAAGCCTACCGTTCCTTCTCCGAATCCA
CCACCCTCAAACAACGCCAGGACATCGTCACCCGCGCCCTAGACAAGCTT
GAAAAGAGAAAAGATGACCTCGCCAGACAGATCACCGAGCAAATGGGCCG
GCCCATATCATACACCGGTGTCGAAGTCGCCACGGCCATCAAGCGCAGCC
ACTACCTAAACCGCATCAGCGACTCCGTCCTCGGCGAAGCGGGCATCGTC
CCCGGAGAAGAAGAACAGGGCTTCAAGCGCTACATCAAGCGCAAGCCTGT
CGGCGTCGTCCTGATCATTTTCGCCTGGAATTACCCCTACCTTGTTCTCG
TTAACAGCTTAATCCCCGCCATTTTGGCCGGGAACGCAGTCATTCTGAAA
CCGTCGCCGCAGACACCGACCATCGCAGAGGAAGTCGCCAATGCGTTTGA
AGAAGCGGGCCTTCCAGAGAACGTGATTCAATATGTGCATTCCGGGTCCC
CAACCCTACTGGAGAGTCTCGTTCGCTCGTCCTGTGTCAATCACATTTGT
TTTACGGGCTCTGTGGAGGGCGGGCTAGCTACGCAGAAAGCGGCCTCTGA
TCGCATCGTCAACCTCGGACTGGAACTAGGCGGCAAGGATCCTGCGTATG
TGCGCGACGACGTCGATATCCCCTGGGCGGCGGCGGAGATCGTCGACGGA
GCTATCTTCAACAGTGGGCAGAGCTGCTGCGCTATCGAGCGGGTCTACGT
GCATCAGAATATCTACGATAAGTTCGTGGCGGAGGTTAAGAAGGTGCTGA
GCAATTTCGTGGTTGGGGACCCGTTCGATAAGAAGACGCAGATCGGGCCT
GTGATATCGAAGCGCGCGAAAGAGGAGATCGAGGCGCATATTGCTGATGC
CGTGGAGAAGGGGGCAAAGGATGAGACGCCGGCGAATGAGACGTTTGAGA
ATCCTCCGTCTGAGGGGAATTATGTTAAGCCTACGCTGTTGACGGGGGTA
ACGCATGAGATGCGGGTCATGACGGAAGAGACGTTTGGGCCGGTGATTCC
GGTTATGAAGGTGGAGGGGGATGATGAGGCCGTTAAGTGGATGAATAGTA
GTGAGTTTGGGCTGACAGCTAGTGTGTGGACGAAGGATGTTGCTGCCGCG
GAGGAGCTGGTTGAGCGGGTGGAGGCGGGGACGGTGTTTATCAATCGATC
GGATTATCCTAGTCCGGACCTGGCCTGGACAGGCTGGAAGAATTCAGGAC
GCGGAGTAACGCTCAGTCGGTTCGGGTTCGAGCAATTCGTCAAGCTGAAG
AGTTACCATATCAAGGACTATCCCAAATAGATGTCGGTCCCAAACATCAC
CACCATCTCCCCCATCACCAACCGTCCCATCCTCAACCGCACCGGCGCCA
ACCCAGAAGACATCGTAGGCATCGCCGAATCCGCCCAAGAAGCCTACCGT
TCCTTCTCCGAATCCACCACCCTCAAACAACGCCAGGACATCGTCACCCG
CGCCCTAGACAAGCTTGAAAAGAGAAAAGATGACCTCGCCAGACAGATCA
CCGAGCAAATGGGCCGGCCCATATCATACACCGGTGTCGAAGTCGCCACG
GCCATCAAGCGCAGCCACTACCTAAACCGCATCAGCGACTCCGTCCTCGG
CGAAGCGGGCATCGTCCCCGGAGAAGAAGAACAGGGCTTCAAGCGCTACA
TCAAGCGCAAGCCTGTCGGCGTCGTCCTGATCATTTTCGCCTGGAATTAC
CCCTACCTTGTTCTCGTTAACAGCTTAATCCCCGCCATTTTGGCCGGGAA
CGCAGTCATTCTGAAACCGTCGCCGCAGACACCGACCATCGCAGAGGAAG
TCGCCAATGCGTTTGAAGAAGCGGGCCTTCCAGAGAACGTGATTCAATAT
GTGCATTCCGGGTCCCCAACCCTACTGGAGAGTCTCGTTCGCTCGTCCTG
TGTCAATCACATTTGTTTTACGGGCTCTGTGGAGGGCGGGCTAGCTACGC
AGAAAGCGGCCTCTGATCGCATCGTCAACCTCGGACTGGAACTAGGCGGC
AAGGATCCTGCGTATGTGCGCGACGACGTCGATATCCCCTGGGCGGCGGC
GGAGATCGTCGACGGAGCTATCTTCAACAGTGGGCAGAGCTGCTGCGCTA
TCGAGCGGGTCTACGTGCATCAGAATATCTACGATAAGTTCGTGGCGGAG
GTTAAGAAGGTGCTGAGCAATTTCGTGGTTGGGGACCCGTTCGATAAGAA
GACGCAGATCGGGCCTGTGATATCGAAGCGCGCGAAAGAGGAGATCGAGG
CGCATATTGCTGATGCCGTGGAGAAGGGGGCAAAGGATGAGACGCCGGCG
AATGAGACGTTTGAGAATCCTCCGTCTGAGGGGAATTATGTTAAGCCTAC
GCTGTTGACGGGGGTAACGCATGAGATGCGGGTCATGACGGAAGAGACGT
TTGGGCCGGTGATTCCGGTTATGAAGGTGGAGGGGGATGATGAGGCCGTT
AAGTGGATGAATAGTAGTGAGTTTGGGCTGACAGCTAGTGTGTGGACGAA
GGATGTTGCTGCCGCGGAGGAGCTGGTTGAGCGGGTGGAGGCGGGGACGG
TGTTTATCAATCGATCGGATTATCCTAGTCCG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0016620oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_28260ATCC64974_28260Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_28260-T1ATCC64974_28260-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_28260-T1.cdsATCC64974_28260-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_28260-T1.exon2ATCC64974_28260-T1.exon2Aspergillus niger N402exon
ATCC64974_28260-T1.exon1ATCC64974_28260-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR016161
DBxrefInterPro:IPR029510
DBxrefInterPro:IPR015590
DBxrefInterPro:IPR016162
DBxrefInterPro:IPR016163
DBxrefPFAM:PF00171
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:532119..533592 -
Powered by Drupal