You are here

Home

ATCC64974_28280-T1, ATCC64974_28280-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_28280-T1
Unique NameATCC64974_28280-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:538328..539533+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_28280-T1 ID=ATCC64974_28280-T1|Name=ATCC64974_28280-T1|organism=Aspergillus niger N402|type=mRNA|length=1206bp|location=Sequence derived from alignment at OGUI01000004.1:538328..539533+ (Aspergillus niger N402)
ATGTCACCAAACAGGCGCAATTACTCGCATATGCGAGACGCCGCATTGAA
TATCAGAGCAGACAGCGACGACGAGTACGAGCATTCAGATATGGCCGCCA
GCGGGGACGAGGCATTGCAGATCCTTATGGAAGCAAATTACAACGATGGC
GCTTCGTATGATCAAAGCTCCACGGATGAATTTGCAAATGATGACGGGGA
CCATTTATGGCAAGTCCAGGCTGATCTTTTGTCCAGCAGGGATGAAAGCG
GTTGTACAGATGAGCGAGAACATGCCTCATGGCAATCTCAATCCACTGAT
CCTGACACCCAGTGCCAACAATTTGATTACCCACCACCACCACCACCCCC
ACCTCCCCAGTTACAACATCCAACCAGGTACTCGCTTGAAAAAAGGAAAC
CCAAGACGGCAACCGAAGACAAGCCAGATGATATCATATCCTACTGTAAT
ATCGTCGTTGACATGAGCAATATGAAGACTGCTCTTCGCAACGTAAAGGA
CTACCTCGATAAGGGCCAAACCCGCGAGGCCGAAGTCGAGGCCCAGAAAG
CTCGGGACTTGGCAGAAAAGTATGGTGAGAGACCAGTGATCGCACGGTGC
AGATACTGGCAGGCTCGGGTGAAGTTTGCTCAAGGAAACTATGAAAAGGC
GTATCGACTGTTTCGCAAATGCCAGTTATGGATCACAAAGCAACCTGAGG
CGAGAACAATGGCATTTTACCTGCCACTGTGTCAGCCGGGATTGAGCGAC
CAAGATCGACAGCGCATGTTGCAGGACGCTCACAGACCCGCAATGCAACT
GCAGAAGATACCAACGGTTAGTGAAGTGCCAGACAACCGAGACTCGAAAC
GAAGATGGAATGATAGCCTTCACTTGTTGTCGCAAGACAATATCCCACAA
TCCACGCATCGGCAGAACGTAGCCCGCCCCAAGTCACTTCTCGAGAGGCA
ACCTGAAGATTCCAGTGGACTCAAACTTGGTGGCAAGCAAAAGTTATTCA
CTTTCGAGATGCACCCCAAAGGCATGGCACCCAGATTCCGGCCGACAGAT
ATTTTCGCAGAACAGCCTTATGAAGTTATTGTGCCACAAGAACAATGGGA
GGATTTCATTGACTATCACAGGGACCAGAGCGTCACGTTGAGTTATCTGG
AGAGGGAGAGACGACGGTACCAAACCGTCGTCCAAGAGAGGTATAATCAG
CGCTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000004.1:538328..539533+

>ATCC64974_28280-T1 ID=ATCC64974_28280-T1|Name=ATCC64974_28280-T1|organism=Aspergillus niger N402|type=CDS|length=1206bp|location=Sequence derived from alignment at OGUI01000004.1:538328..539533+ (Aspergillus niger N402)
ATGTCACCAAACAGGCGCAATTACTCGCATATGCGAGACGCCGCATTGAA
TATCAGAGCAGACAGCGACGACGAGTACGAGCATTCAGATATGGCCGCCA
GCGGGGACGAGGCATTGCAGATCCTTATGGAAGCAAATTACAACGATGGC
GCTTCGTATGATCAAAGCTCCACGGATGAATTTGCAAATGATGACGGGGA
CCATTTATGGCAAGTCCAGGCTGATCTTTTGTCCAGCAGGGATGAAAGCG
GTTGTACAGATGAGCGAGAACATGCCTCATGGCAATCTCAATCCACTGAT
CCTGACACCCAGTGCCAACAATTTGATTACCCACCACCACCACCACCCCC
ACCTCCCCAGTTACAACATCCAACCAGGTACTCGCTTGAAAAAAGGAAAC
CCAAGACGGCAACCGAAGACAAGCCAGATGATATCATATCCTACTGTAAT
ATCGTCGTTGACATGAGCAATATGAAGACTGCTCTTCGCAACGTAAAGGA
CTACCTCGATAAGGGCCAAACCCGCGAGGCCGAAGTCGAGGCCCAGAAAG
CTCGGGACTTGGCAGAAAAGTATGGTGAGAGACCAGTGATCGCACGGTGC
AGATACTGGCAGGCTCGGGTGAAGTTTGCTCAAGGAAACTATGAAAAGGC
GTATCGACTGTTTCGCAAATGCCAGTTATGGATCACAAAGCAACCTGAGG
CGAGAACAATGGCATTTTACCTGCCACTGTGTCAGCCGGGATTGAGCGAC
CAAGATCGACAGCGCATGTTGCAGGACGCTCACAGACCCGCAATGCAACT
GCAGAAGATACCAACGGTTAGTGAAGTGCCAGACAACCGAGACTCGAAAC
GAAGATGGAATGATAGCCTTCACTTGTTGTCGCAAGACAATATCCCACAA
TCCACGCATCGGCAGAACGTAGCCCGCCCCAAGTCACTTCTCGAGAGGCA
ACCTGAAGATTCCAGTGGACTCAAACTTGGTGGCAAGCAAAAGTTATTCA
CTTTCGAGATGCACCCCAAAGGCATGGCACCCAGATTCCGGCCGACAGAT
ATTTTCGCAGAACAGCCTTATGAAGTTATTGTGCCACAAGAACAATGGGA
GGATTTCATTGACTATCACAGGGACCAGAGCGTCACGTTGAGTTATCTGG
AGAGGGAGAGACGACGGTACCAAACCGTCGTCCAAGAGAGGTATAATCAG
CGCTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_28280ATCC64974_28280Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_28280-T1.exon1ATCC64974_28280-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_28280-T1.cdsATCC64974_28280-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_28280-T1ATCC64974_28280-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR011990
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:538328..539533 +
Powered by Drupal