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ATCC64974_28380-T1, ATCC64974_28380-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_28380-T1
Unique NameATCC64974_28380-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:572907..573756+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_28380-T1 ID=ATCC64974_28380-T1|Name=ATCC64974_28380-T1|organism=Aspergillus niger N402|type=mRNA|length=850bp|location=Sequence derived from alignment at OGUI01000004.1:572907..573756+ (Aspergillus niger N402)
ATGGGTCTCCTCTATCCTGCCGGTGTTGTAATCGTGGCCGCAGCGGTGGT
CGGACTGTGTAAGGAAACCCCATCATTCTGGCGCAGTGGGCTTCATCAAG
ATACTAATTTGGCTTGTTTCCATGATTAGACTACCTCTTCCGCGGCGAAG
GCGAACAGATTAACGTACGCCACAAATCCCTACGACTACGATGAGCAGTG
AACACCCGCTAATTCGATCTAGATCGGCTACTTCCTCGAGTCGGTGTCTC
CGTATGCCTGGGCGAACTTTGGGATTGCTATGTGCATTGGCTTATCGGTG
GTTGGTGCCGCATGGTATGGCTTTACGAGTTCCGCTTGTGTCATTGGGAA
CGAAATACTGACTTTGTTCCCATCAGGGGTATCTTCTTGACCGGCTCCTC
GATCGTTGGTGGAGGTGTCAAAGCACCCAGAATCCGTACCAAGAACTTGA
TTTCGATTATTTTCTGTGAAGTCGTGGCTATCTATGGTGTTATTATGGCT
ATCGTCTTCTCCTCCAAGCTCAACCTCGTCGAAGGCGATGAGGCCTTCTC
TGGCAGCAACTACTACACCGGATATGCGCTGTTCTGGGGCGGTATCACTG
TGGGCGCCTGCAACCTGATTTGCGGTATCTCCGTCGGTATTAACGGAAGT
GGTGCGGCCCTGGCCGATGCTGCTGACCCTAGCTTGTTCGTCAGCCCCTT
CTCTCGATTAACGGAGTGAACGCTAACAATATGCACGATAGGTTCGTCAA
GATCCTTGTTATCGAAATCTTCAGCTCTGTTCTCGGCCTTTTCGGATTGA
TTGTTGGGCTTCTGGTCGGAGGAAAGGCACTTGACTTTGGAGCTGCCTGA
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Coding sequence (CDS) from alignment at OGUI01000004.1:572907..573756+

>ATCC64974_28380-T1 ID=ATCC64974_28380-T1|Name=ATCC64974_28380-T1|organism=Aspergillus niger N402|type=CDS|length=3015bp|location=Sequence derived from alignment at OGUI01000004.1:572907..573756+ (Aspergillus niger N402)
ATGGGTCTCCTCTATCCTGCCGGTGTTGTAATCGTGGCCGCAGCGGTGGT
CGGACTGTACTACCTCTTCCGCGGCGAAGGCGAACAGATTAACATCGGCT
ACTTCCTCGAGTCGGTGTCTCCGTATGCCTGGGCGAACTTTGGGATTGCT
ATGTGCATTGGCTTATCGGTGGTTGGTGCCGCATGGGGTATCTTCTTGAC
CGGCTCCTCGATCGTTGGTGGAGGTGTCAAAGCACCCAGAATCCGTACCA
AGAACTTGATTTCGATTATTTTCTGTGAAGTCGTGGCTATCTATGGTGTT
ATTATGGCTATCGTCTTCTCCTCCAAGCTCAACCTCGTCGAAGGCGATGA
GGCCTTCTCTGGCAGCAACTACTACACCGGATATGCGCTGTTCTGGGGCG
GTATCACTGTGGGCGCCTGCAACCTGATTTGCGGTATCTCCGTCGGTATT
AACGGAAGTGGTGCGGCCCTGGCCGATGCTGCTGACCCTAGCTTGTTCGT
CAAGATCCTTGTTATCGAAATCTTCAGCTCTGTTCTCGGCCTTTTCGGAT
TGATTGTTGGGCTTCTGGTCGGAGGAAAGGCACTTGACTTTGGAGCTGCC
TGAATGGGTCTCCTCTATCCTGCCGGTGTTGTAATCGTGGCCGCAGCGGT
GGTCGGACTGTACTACCTCTTCCGCGGCGAAGGCGAACAGATTAACATCG
GCTACTTCCTCGAGTCGGTGTCTCCGTATGCCTGGGCGAACTTTGGGATT
GCTATGTGCATTGGCTTATCGGTGGTTGGTGCCGCATGGGGTATCTTCTT
GACCGGCTCCTCGATCGTTGGTGGAGGTGTCAAAGCACCCAGAATCCGTA
CCAAGAACTTGATTTCGATTATTTTCTGTGAAGTCGTGGCTATCTATGGT
GTTATTATGGCTATCGTCTTCTCCTCCAAGCTCAACCTCGTCGAAGGCGA
TGAGGCCTTCTCTGGCAGCAACTACTACACCGGATATGCGCTGTTCTGGG
GCGGTATCACTGTGGGCGCCTGCAACCTGATTTGCGGTATCTCCGTCGGT
ATTAACGGAAGTGGTGCGGCCCTGGCCGATGCTGCTGACCCTAGCTTGTT
CGTCAAGATCCTTGTTATCGAAATCTTCAGCTCTGTTCTCGGCCTTTTCG
GATTGATTGTTGGGCTTCTGGTCGGAGGAAAGGCACTTGACTTTGGAGCT
GCCTGAATGGGTCTCCTCTATCCTGCCGGTGTTGTAATCGTGGCCGCAGC
GGTGGTCGGACTGTACTACCTCTTCCGCGGCGAAGGCGAACAGATTAACA
TCGGCTACTTCCTCGAGTCGGTGTCTCCGTATGCCTGGGCGAACTTTGGG
ATTGCTATGTGCATTGGCTTATCGGTGGTTGGTGCCGCATGGGGTATCTT
CTTGACCGGCTCCTCGATCGTTGGTGGAGGTGTCAAAGCACCCAGAATCC
GTACCAAGAACTTGATTTCGATTATTTTCTGTGAAGTCGTGGCTATCTAT
GGTGTTATTATGGCTATCGTCTTCTCCTCCAAGCTCAACCTCGTCGAAGG
CGATGAGGCCTTCTCTGGCAGCAACTACTACACCGGATATGCGCTGTTCT
GGGGCGGTATCACTGTGGGCGCCTGCAACCTGATTTGCGGTATCTCCGTC
GGTATTAACGGAAGTGGTGCGGCCCTGGCCGATGCTGCTGACCCTAGCTT
GTTCGTCAAGATCCTTGTTATCGAAATCTTCAGCTCTGTTCTCGGCCTTT
TCGGATTGATTGTTGGGCTTCTGGTCGGAGGAAAGGCACTTGACTTTGGA
GCTGCCTGAATGGGTCTCCTCTATCCTGCCGGTGTTGTAATCGTGGCCGC
AGCGGTGGTCGGACTGTACTACCTCTTCCGCGGCGAAGGCGAACAGATTA
ACATCGGCTACTTCCTCGAGTCGGTGTCTCCGTATGCCTGGGCGAACTTT
GGGATTGCTATGTGCATTGGCTTATCGGTGGTTGGTGCCGCATGGGGTAT
CTTCTTGACCGGCTCCTCGATCGTTGGTGGAGGTGTCAAAGCACCCAGAA
TCCGTACCAAGAACTTGATTTCGATTATTTTCTGTGAAGTCGTGGCTATC
TATGGTGTTATTATGGCTATCGTCTTCTCCTCCAAGCTCAACCTCGTCGA
AGGCGATGAGGCCTTCTCTGGCAGCAACTACTACACCGGATATGCGCTGT
TCTGGGGCGGTATCACTGTGGGCGCCTGCAACCTGATTTGCGGTATCTCC
GTCGGTATTAACGGAAGTGGTGCGGCCCTGGCCGATGCTGCTGACCCTAG
CTTGTTCGTCAAGATCCTTGTTATCGAAATCTTCAGCTCTGTTCTCGGCC
TTTTCGGATTGATTGTTGGGCTTCTGGTCGGAGGAAAGGCACTTGACTTT
GGAGCTGCCTGAATGGGTCTCCTCTATCCTGCCGGTGTTGTAATCGTGGC
CGCAGCGGTGGTCGGACTGTACTACCTCTTCCGCGGCGAAGGCGAACAGA
TTAACATCGGCTACTTCCTCGAGTCGGTGTCTCCGTATGCCTGGGCGAAC
TTTGGGATTGCTATGTGCATTGGCTTATCGGTGGTTGGTGCCGCATGGGG
TATCTTCTTGACCGGCTCCTCGATCGTTGGTGGAGGTGTCAAAGCACCCA
GAATCCGTACCAAGAACTTGATTTCGATTATTTTCTGTGAAGTCGTGGCT
ATCTATGGTGTTATTATGGCTATCGTCTTCTCCTCCAAGCTCAACCTCGT
CGAAGGCGATGAGGCCTTCTCTGGCAGCAACTACTACACCGGATATGCGC
TGTTCTGGGGCGGTATCACTGTGGGCGCCTGCAACCTGATTTGCGGTATC
TCCGTCGGTATTAACGGAAGTGGTGCGGCCCTGGCCGATGCTGCTGACCC
TAGCTTGTTCGTCAAGATCCTTGTTATCGAAATCTTCAGCTCTGTTCTCG
GCCTTTTCGGATTGATTGTTGGGCTTCTGGTCGGAGGAAAGGCACTTGAC
TTTGGAGCTGCCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0033177proton-transporting two-sector ATPase complex, proton-transporting domain
GO:0033179proton-transporting V-type ATPase, V0 domain
Vocabulary: Biological Process
TermDefinition
GO:1902600proton transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0015078proton transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
VMA16ATCC64974_28380Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_28380-T1ATCC64974_28380-T1-proteinAspergillus niger N402polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_28380-T1.exon1ATCC64974_28380-T1.exon1Aspergillus niger N402exon
ATCC64974_28380-T1.exon2ATCC64974_28380-T1.exon2Aspergillus niger N402exon
ATCC64974_28380-T1.exon3ATCC64974_28380-T1.exon3Aspergillus niger N402exon
ATCC64974_28380-T1.exon4ATCC64974_28380-T1.exon4Aspergillus niger N402exon
ATCC64974_28380-T1.exon5ATCC64974_28380-T1.exon5Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_28380-T1.cdsATCC64974_28380-T1.cdsAspergillus niger N402CDS


Properties
Property NameValue
NoteBUSCO:EOG09265G5C
DBxrefInterPro:IPR035921
DBxrefInterPro:IPR002379
DBxrefInterPro:IPR000245
DBxrefPFAM:PF00137
ProductH( )-transporting V0 sector ATPase subunit c''
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:572907..573756 +
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