You are here

Home

ATCC64974_28610-T1, ATCC64974_28610-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_28610-T1
Unique NameATCC64974_28610-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:633730..634808+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_28610-T1 ID=ATCC64974_28610-T1|Name=ATCC64974_28610-T1|organism=Aspergillus niger N402|type=mRNA|length=1079bp|location=Sequence derived from alignment at OGUI01000004.1:633730..634808+ (Aspergillus niger N402)
ATGCCCCTAAATTACCTCCTAACCGGCAGCACGGGCGGCCTCGGCTCCCT
CATCCTGGACTACTTCACCACGCACTTTCCCCCAACCCAAGAATCATCCA
CAACAAACAGCATCACCTACGCCGCCGCCTCCTCCAACCCATCCAACTCC
CATCGCTTCACTTCAAAAGGCATCCCCTTCCGCACAGTCAACTACGACGA
CCCGGAGACGCTAGACGTTGCTTTCAAAGACGTAGAGAATCTTTTCTTCG
TGAGCACGAATACATTCGACGTCGAGAAGCGCAGACGACAGCATTTGAAT
GTGGTTGAGGCGGCGAAGAGGAATGGTGTTAAGCATGTACGCTTACATTT
CACTCCGTATAATATTTCCATATGAAAAAGATGCTAATGGTATGATAGGT
ATGGTACACCTCTCTCGCCTTCGGAGGCCTGGGATCGAATTCCAAGGCCG
CGGTGCAGCAGGCGCATTATATGACGGAGGATATGTTGAGAGAGTACACC
TCCCTCCCTTTCCTTTCCACCTCCTTGTTTTTTATCACCATTTACTGATT
ATATTTCAGGTCTGGAATTAATTACACCTCCATTCGCGAAGGAATCTACA
CTGAAGCATTCCCTCTCTTCTTGAACTGGTATCCCCAGTCAACGACCCTC
TATCTGCCCTCTGCGTCAGGGAAGATCGCATTCACGCTCCGGTCTGAACT
AGCGGAAGCAACGGCTAAGTTGATGTTAAAGGGCGGTCGCGATAAGGAGA
TTGTGTTGTTGACTGCGTCGGAGCCTGTTTCTATGCAGGAAATAGTGGAG
GTTATTAATGAGACGACTGATAGAGAGGTGAAGATTGAGATCGTCGATCC
GGAGACATATGTACGGGTCAACGGGGAGAATGATATCGGGGGCAAAGCGG
AGGGATTCTTCCGGCAGTTGGTGGGGTGGTTTGAGAGTATTGAGAATGGG
GAGGCTGGGTTTACGGATGGGTTGATGGGGGAGGTGTTGGGGAGGGAGCC
GGTGACGCCGAGGGAGGCGATTAGGGGGTTATTGGAGAAGGAGAGGGATT
ATACGTGGCATCAGAATTATAGCAAGTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000004.1:633730..634808+

>ATCC64974_28610-T1 ID=ATCC64974_28610-T1|Name=ATCC64974_28610-T1|organism=Aspergillus niger N402|type=CDS|length=2853bp|location=Sequence derived from alignment at OGUI01000004.1:633730..634808+ (Aspergillus niger N402)
ATGCCCCTAAATTACCTCCTAACCGGCAGCACGGGCGGCCTCGGCTCCCT
CATCCTGGACTACTTCACCACGCACTTTCCCCCAACCCAAGAATCATCCA
CAACAAACAGCATCACCTACGCCGCCGCCTCCTCCAACCCATCCAACTCC
CATCGCTTCACTTCAAAAGGCATCCCCTTCCGCACAGTCAACTACGACGA
CCCGGAGACGCTAGACGTTGCTTTCAAAGACGTAGAGAATCTTTTCTTCG
TGAGCACGAATACATTCGACGTCGAGAAGCGCAGACGACAGCATTTGAAT
GTGGTTGAGGCGGCGAAGAGGAATGGTGTTAAGCATGTATGGTACACCTC
TCTCGCCTTCGGAGGCCTGGGATCGAATTCCAAGGCCGCGGTGCAGCAGG
CGCATTATATGACGGAGGATATGTTGAGAGAGTCTGGAATTAATTACACC
TCCATTCGCGAAGGAATCTACACTGAAGCATTCCCTCTCTTCTTGAACTG
GTATCCCCAGTCAACGACCCTCTATCTGCCCTCTGCGTCAGGGAAGATCG
CATTCACGCTCCGGTCTGAACTAGCGGAAGCAACGGCTAAGTTGATGTTA
AAGGGCGGTCGCGATAAGGAGATTGTGTTGTTGACTGCGTCGGAGCCTGT
TTCTATGCAGGAAATAGTGGAGGTTATTAATGAGACGACTGATAGAGAGG
TGAAGATTGAGATCGTCGATCCGGAGACATATGTACGGGTCAACGGGGAG
AATGATATCGGGGGCAAAGCGGAGGGATTCTTCCGGCAGTTGGTGGGGTG
GTTTGAGAGTATTGAGAATGGGGAGGCTGGGTTTACGGATGGGTTGATGG
GGGAGGTGTTGGGGAGGGAGCCGGTGACGCCGAGGGAGGCGATTAGGGGG
TTATTGGAGAAGGAGAGGGATTATACGTGGCATCAGAATTATAGCAAGTA
AATGCCCCTAAATTACCTCCTAACCGGCAGCACGGGCGGCCTCGGCTCCC
TCATCCTGGACTACTTCACCACGCACTTTCCCCCAACCCAAGAATCATCC
ACAACAAACAGCATCACCTACGCCGCCGCCTCCTCCAACCCATCCAACTC
CCATCGCTTCACTTCAAAAGGCATCCCCTTCCGCACAGTCAACTACGACG
ACCCGGAGACGCTAGACGTTGCTTTCAAAGACGTAGAGAATCTTTTCTTC
GTGAGCACGAATACATTCGACGTCGAGAAGCGCAGACGACAGCATTTGAA
TGTGGTTGAGGCGGCGAAGAGGAATGGTGTTAAGCATGTATGGTACACCT
CTCTCGCCTTCGGAGGCCTGGGATCGAATTCCAAGGCCGCGGTGCAGCAG
GCGCATTATATGACGGAGGATATGTTGAGAGAGTCTGGAATTAATTACAC
CTCCATTCGCGAAGGAATCTACACTGAAGCATTCCCTCTCTTCTTGAACT
GGTATCCCCAGTCAACGACCCTCTATCTGCCCTCTGCGTCAGGGAAGATC
GCATTCACGCTCCGGTCTGAACTAGCGGAAGCAACGGCTAAGTTGATGTT
AAAGGGCGGTCGCGATAAGGAGATTGTGTTGTTGACTGCGTCGGAGCCTG
TTTCTATGCAGGAAATAGTGGAGGTTATTAATGAGACGACTGATAGAGAG
GTGAAGATTGAGATCGTCGATCCGGAGACATATGTACGGGTCAACGGGGA
GAATGATATCGGGGGCAAAGCGGAGGGATTCTTCCGGCAGTTGGTGGGGT
GGTTTGAGAGTATTGAGAATGGGGAGGCTGGGTTTACGGATGGGTTGATG
GGGGAGGTGTTGGGGAGGGAGCCGGTGACGCCGAGGGAGGCGATTAGGGG
GTTATTGGAGAAGGAGAGGGATTATACGTGGCATCAGAATTATAGCAAGT
AAATGCCCCTAAATTACCTCCTAACCGGCAGCACGGGCGGCCTCGGCTCC
CTCATCCTGGACTACTTCACCACGCACTTTCCCCCAACCCAAGAATCATC
CACAACAAACAGCATCACCTACGCCGCCGCCTCCTCCAACCCATCCAACT
CCCATCGCTTCACTTCAAAAGGCATCCCCTTCCGCACAGTCAACTACGAC
GACCCGGAGACGCTAGACGTTGCTTTCAAAGACGTAGAGAATCTTTTCTT
CGTGAGCACGAATACATTCGACGTCGAGAAGCGCAGACGACAGCATTTGA
ATGTGGTTGAGGCGGCGAAGAGGAATGGTGTTAAGCATGTATGGTACACC
TCTCTCGCCTTCGGAGGCCTGGGATCGAATTCCAAGGCCGCGGTGCAGCA
GGCGCATTATATGACGGAGGATATGTTGAGAGAGTCTGGAATTAATTACA
CCTCCATTCGCGAAGGAATCTACACTGAAGCATTCCCTCTCTTCTTGAAC
TGGTATCCCCAGTCAACGACCCTCTATCTGCCCTCTGCGTCAGGGAAGAT
CGCATTCACGCTCCGGTCTGAACTAGCGGAAGCAACGGCTAAGTTGATGT
TAAAGGGCGGTCGCGATAAGGAGATTGTGTTGTTGACTGCGTCGGAGCCT
GTTTCTATGCAGGAAATAGTGGAGGTTATTAATGAGACGACTGATAGAGA
GGTGAAGATTGAGATCGTCGATCCGGAGACATATGTACGGGTCAACGGGG
AGAATGATATCGGGGGCAAAGCGGAGGGATTCTTCCGGCAGTTGGTGGGG
TGGTTTGAGAGTATTGAGAATGGGGAGGCTGGGTTTACGGATGGGTTGAT
GGGGGAGGTGTTGGGGAGGGAGCCGGTGACGCCGAGGGAGGCGATTAGGG
GGTTATTGGAGAAGGAGAGGGATTATACGTGGCATCAGAATTATAGCAAG
TAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_28610ATCC64974_28610Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_28610-T1.exon1ATCC64974_28610-T1.exon1Aspergillus niger N402exon
ATCC64974_28610-T1.exon2ATCC64974_28610-T1.exon2Aspergillus niger N402exon
ATCC64974_28610-T1.exon3ATCC64974_28610-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_28610-T1.cdsATCC64974_28610-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_28610-T1ATCC64974_28610-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR008030
DBxrefPFAM:PF05368
DBxrefPFAM:PF13460
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:633730..634808 +
Powered by Drupal