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ATCC64974_28980-T1, ATCC64974_28980-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_28980-T1
Unique NameATCC64974_28980-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:751073..752296+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_28980-T1 ID=ATCC64974_28980-T1|Name=ATCC64974_28980-T1|organism=Aspergillus niger N402|type=mRNA|length=1224bp|location=Sequence derived from alignment at OGUI01000004.1:751073..752296+ (Aspergillus niger N402)
ATGAAGACTACCACCTACAGTTTGCTCGCTCTGGCAGCGGCTTCCAAGCT
GGCTTCCGCCCACACCACCGTCCAGGCCGTCTGGATCAACGGCGAGGACC
AGGGTCTCGGTAACTCCGCCGATGGCTACATCCGCAGTCCCCCCAGCAAC
AGCCCCGTCACCGACGTCACGTCTACCGACATGACCTGCAACGTCAACGG
TGACCAGGCCGCCTCCAAGACCCTCTCCGTCAAGGCCGGTGATGTTGTCA
CCTTCGAGTGGCACCACAGCGACCGCTCCGACTCCGACGACATCATCGCC
TCCTCCCACAAGGGTCCCGTCCAGGTCTACATGGCCCCGACGGCCAAGGG
CTCCAACGGCAACAACTGGGTCAAGATCGCCGAGGACGGATACCACAAGA
GCTCTGACGAGTGGGCTACCGACATCCTGATCGCCAACAAGGGCAAGCAC
AACATCACCGTTCCCGACGTTCCCGCCGGTAACTACCTCTTCCGCCCTGA
GATCATTGCCCTCCACGAGGGTAACCGCGAGGGTGGTGCCCAGTTCTACA
TGGAGTGTGTCCAGTTCAAGGTCACCTCCGACGGCTCCAGCGAGCTTCCC
TCCGGTGTCTCCATCCCCGGCGTCTACACCGCCACTGACCCCGGTATCCT
CTTCGACATCTACAACTCCTTCGACAGCTACCCCATCCCCGGCCCGGATG
TCTGGGATGGCTCCAGCTCCGGCTCCAGCTCCGGATCCTCCTCCGCTGCT
GCTGCTGCTACTACCCCCGCCACCCAGGCCGCCGTCGCGGTCTCTTCCTC
TGCTGCTGCTGTCGTTGAGTCCACCTCTTCCGCCGCCGCCGCCGCCGCTG
CTACCACCGAAGCTGCCGCTCCCGTCGTCAGCTCTGCTGCCCCCGTCCAG
CAGGCCACCTCCGCTGTCACCAGCCAGGCCCAGGCCCCCACCACCTTCGC
CACCTCTTCTAAGTCCTCCAAGACTGCCTGCAAGAACAAGACCAAGTCCA
AGTCCAAGGTTGCTGCTTCCAGCACTGAGGCCGTCGTTGCCCCCGCTCCT
ACTTCCAGCGTCGTCCCTGCTGTCAGTGCCAGCGCTAGCGCTTCCGCTGG
CGGTGTTGCTAAGAAGTACGAGCGCTGCGGTGGTATCAGCCACACTGGCC
CTACCACTTGCGAGAGCGGCTCCGTTTGCAAGAAGTGGAACCCTTACTAC
TACCAGTGCGTTGAGTCTCAGTAA
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Coding sequence (CDS) from alignment at OGUI01000004.1:751073..752296+

>ATCC64974_28980-T1 ID=ATCC64974_28980-T1|Name=ATCC64974_28980-T1|organism=Aspergillus niger N402|type=CDS|length=1224bp|location=Sequence derived from alignment at OGUI01000004.1:751073..752296+ (Aspergillus niger N402)
ATGAAGACTACCACCTACAGTTTGCTCGCTCTGGCAGCGGCTTCCAAGCT
GGCTTCCGCCCACACCACCGTCCAGGCCGTCTGGATCAACGGCGAGGACC
AGGGTCTCGGTAACTCCGCCGATGGCTACATCCGCAGTCCCCCCAGCAAC
AGCCCCGTCACCGACGTCACGTCTACCGACATGACCTGCAACGTCAACGG
TGACCAGGCCGCCTCCAAGACCCTCTCCGTCAAGGCCGGTGATGTTGTCA
CCTTCGAGTGGCACCACAGCGACCGCTCCGACTCCGACGACATCATCGCC
TCCTCCCACAAGGGTCCCGTCCAGGTCTACATGGCCCCGACGGCCAAGGG
CTCCAACGGCAACAACTGGGTCAAGATCGCCGAGGACGGATACCACAAGA
GCTCTGACGAGTGGGCTACCGACATCCTGATCGCCAACAAGGGCAAGCAC
AACATCACCGTTCCCGACGTTCCCGCCGGTAACTACCTCTTCCGCCCTGA
GATCATTGCCCTCCACGAGGGTAACCGCGAGGGTGGTGCCCAGTTCTACA
TGGAGTGTGTCCAGTTCAAGGTCACCTCCGACGGCTCCAGCGAGCTTCCC
TCCGGTGTCTCCATCCCCGGCGTCTACACCGCCACTGACCCCGGTATCCT
CTTCGACATCTACAACTCCTTCGACAGCTACCCCATCCCCGGCCCGGATG
TCTGGGATGGCTCCAGCTCCGGCTCCAGCTCCGGATCCTCCTCCGCTGCT
GCTGCTGCTACTACCCCCGCCACCCAGGCCGCCGTCGCGGTCTCTTCCTC
TGCTGCTGCTGTCGTTGAGTCCACCTCTTCCGCCGCCGCCGCCGCCGCTG
CTACCACCGAAGCTGCCGCTCCCGTCGTCAGCTCTGCTGCCCCCGTCCAG
CAGGCCACCTCCGCTGTCACCAGCCAGGCCCAGGCCCCCACCACCTTCGC
CACCTCTTCTAAGTCCTCCAAGACTGCCTGCAAGAACAAGACCAAGTCCA
AGTCCAAGGTTGCTGCTTCCAGCACTGAGGCCGTCGTTGCCCCCGCTCCT
ACTTCCAGCGTCGTCCCTGCTGTCAGTGCCAGCGCTAGCGCTTCCGCTGG
CGGTGTTGCTAAGAAGTACGAGCGCTGCGGTGGTATCAGCCACACTGGCC
CTACCACTTGCGAGAGCGGCTCCGTTTGCAAGAAGTGGAACCCTTACTAC
TACCAGTGCGTTGAGTCTCAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0030248cellulose binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_28980ATCC64974_28980Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_28980-T1.exon1ATCC64974_28980-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_28980-T1.cdsATCC64974_28980-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_28980-T1ATCC64974_28980-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-20)
NoteCAZy:AA9
DBxrefInterPro:IPR035971
DBxrefInterPro:IPR005103
DBxrefInterPro:IPR000254
DBxrefPFAM:PF03443
DBxrefPFAM:PF00734
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:751073..752296 +
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