You are here

Home

ATCC64974_29140-T1, ATCC64974_29140-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_29140-T1
Unique NameATCC64974_29140-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:796962..798240+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_29140-T1 ID=ATCC64974_29140-T1|Name=ATCC64974_29140-T1|organism=Aspergillus niger N402|type=mRNA|length=1279bp|location=Sequence derived from alignment at OGUI01000004.1:796962..798240+ (Aspergillus niger N402)
ATGCCACAATGGATCCCCCCGGCACAATTTCTTGCTATCCAACTTCTAAC
CGGCACCACTGTCGCCTTCACGCCCGCTAACTCTCCCCTCCGATCAATCG
CCTCCCTCATCGTACTTATCCTCGCCTACTGCATGCAAATTAGCGCAAAT
GCCCACCTCCACGGCACCCGCTTCGGCGCCCCGCTCGTCGCAATGTGCTG
GATGAATGTTCTCAACGGGATAGATTTACTGGTTCTCACGCGCGCGGACT
ACGATAAACAACTAGCATACAACACCAAGCAGAAACCGACCTCCAAAGAC
AAATCACCACATGAACCACAAACGAAATCACTATTAGATAAATATCTCTG
GTCACTAAACCTCTCATTCAACTACCGCCGCATCAACACCCCCTGGCAAA
TCCACGCCCTCACCACATTCAACAAAACCCCCACTCGGACACGATTCCTC
CTCACCTCCCTCCTCAAACTCACCATCTCCATTGCGATCATCCAACTCTT
CACCCTCGAGACCACCGATCCGTATCTCGGCCGCGCAGTGGATAAATTAC
CCGTTCGGCCGGCCGAGATCCTCCTCCCGTTTCGGTATCACGTTGGCTGG
GGGAAAGGTGATCTTTTCCTCCGGTTCCTCTTCACTCTCTCCTTTGGAAT
CGTAGCACGCGCATTCATCGTCACGGGGTATACCGCTGCCGCGGTGGTGG
CTGTAGCATTGGGTCAGGAGCCGAGTATGTGGCCGCCTGTTGGGGGTGGA
TTGCTGGATGCGTGTTCGATTAGGAGGTTCTGGGGGTATGCATACACCTT
CCTCCCATTCATTATTGCAGTTCTTGTACTAATGAAGTATGTGATGCTAC
AGGAAAACATGGCACCAAACCCTCCGCCAACTCCTTTGCTCGAACGCGGA
TTTCGTCTCGGGCACTATCCTGCGCCTTCCGGTCCGATTCCAGTGGTGCT
TTCGAGTTATTTTCGCGTTCCTTGTTTCGGGATTAGTGCATACGGGCATG
GATGTCGGGTTCGGGGTACGGATTGATGAGAGTGGGGCGTTGTGGTTCTT
CGCATTGCAGATTCTGGGTGTAGCCGGGGAGATGCTTGCTGAGAGGTTGT
TGGCTCCGGTGAGTGTGTTCTTGTCGAGGGGGGTTAGGAGGGGAGTCGGG
TTTGTTTGGGTTGCGGTCTTTATGCTCTGGACTTTGCCGGTGTGGATTTA
TCCGATTCTGGTCCAGTTGTATGCGGATGGGGTGCGCATGATGAGTCCGT
TTTTGGGGCTGGGGGGTTGGGATGTTTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000004.1:796962..798240+

>ATCC64974_29140-T1 ID=ATCC64974_29140-T1|Name=ATCC64974_29140-T1|organism=Aspergillus niger N402|type=CDS|length=2424bp|location=Sequence derived from alignment at OGUI01000004.1:796962..798240+ (Aspergillus niger N402)
ATGCCACAATGGATCCCCCCGGCACAATTTCTTGCTATCCAACTTCTAAC
CGGCACCACTGTCGCCTTCACGCCCGCTAACTCTCCCCTCCGATCAATCG
CCTCCCTCATCGTACTTATCCTCGCCTACTGCATGCAAATTAGCGCAAAT
GCCCACCTCCACGGCACCCGCTTCGGCGCCCCGCTCGTCGCAATGTGCTG
GATGAATGTTCTCAACGGGATAGATTTACTGGTTCTCACGCGCGCGGACT
ACGATAAACAACTAGCATACAACACCAAGCAGAAACCGACCTCCAAAGAC
AAATCACCACATGAACCACAAACGAAATCACTATTAGATAAATATCTCTG
GTCACTAAACCTCTCATTCAACTACCGCCGCATCAACACCCCCTGGCAAA
TCCACGCCCTCACCACATTCAACAAAACCCCCACTCGGACACGATTCCTC
CTCACCTCCCTCCTCAAACTCACCATCTCCATTGCGATCATCCAACTCTT
CACCCTCGAGACCACCGATCCGTATCTCGGCCGCGCAGTGGATAAATTAC
CCGTTCGGCCGGCCGAGATCCTCCTCCCGTTTCGGTATCACGTTGGCTGG
GGGAAAGGTGATCTTTTCCTCCGGTTCCTCTTCACTCTCTCCTTTGGAAT
CGTAGCACGCGCATTCATCGTCACGGGGTATACCGCTGCCGCGGTGGTGG
CTGTAGCATTGGGTCAGGAGCCGAGTATGTGGCCGCCTGTTGGGGGTGGA
TTGCTGGATGCGTGTTCGATTAGGAGGTTCTGGGGGAAAACATGGCACCA
AACCCTCCGCCAACTCCTTTGCTCGAACGCGGATTTCGTCTCGGGCACTA
TCCTGCGCCTTCCGGTCCGATTCCAGTGGTGCTTTCGAGTTATTTTCGCG
TTCCTTGTTTCGGGATTAGTGCATACGGGCATGGATGTCGGGTTCGGGGT
ACGGATTGATGAGAGTGGGGCGTTGTGGTTCTTCGCATTGCAGATTCTGG
GTGTAGCCGGGGAGATGCTTGCTGAGAGGTTGTTGGCTCCGGTGAGTGTG
TTCTTGTCGAGGGGGGTTAGGAGGGGAGTCGGGTTTGTTTGGGTTGCGGT
CTTTATGCTCTGGACTTTGCCGGTGTGGATTTATCCGATTCTGGTCCAGT
TGTATGCGGATGGGGTGCGCATGATGAGTCCGTTTTTGGGGCTGGGGGGT
TGGGATGTTTGAATGCCACAATGGATCCCCCCGGCACAATTTCTTGCTAT
CCAACTTCTAACCGGCACCACTGTCGCCTTCACGCCCGCTAACTCTCCCC
TCCGATCAATCGCCTCCCTCATCGTACTTATCCTCGCCTACTGCATGCAA
ATTAGCGCAAATGCCCACCTCCACGGCACCCGCTTCGGCGCCCCGCTCGT
CGCAATGTGCTGGATGAATGTTCTCAACGGGATAGATTTACTGGTTCTCA
CGCGCGCGGACTACGATAAACAACTAGCATACAACACCAAGCAGAAACCG
ACCTCCAAAGACAAATCACCACATGAACCACAAACGAAATCACTATTAGA
TAAATATCTCTGGTCACTAAACCTCTCATTCAACTACCGCCGCATCAACA
CCCCCTGGCAAATCCACGCCCTCACCACATTCAACAAAACCCCCACTCGG
ACACGATTCCTCCTCACCTCCCTCCTCAAACTCACCATCTCCATTGCGAT
CATCCAACTCTTCACCCTCGAGACCACCGATCCGTATCTCGGCCGCGCAG
TGGATAAATTACCCGTTCGGCCGGCCGAGATCCTCCTCCCGTTTCGGTAT
CACGTTGGCTGGGGGAAAGGTGATCTTTTCCTCCGGTTCCTCTTCACTCT
CTCCTTTGGAATCGTAGCACGCGCATTCATCGTCACGGGGTATACCGCTG
CCGCGGTGGTGGCTGTAGCATTGGGTCAGGAGCCGAGTATGTGGCCGCCT
GTTGGGGGTGGATTGCTGGATGCGTGTTCGATTAGGAGGTTCTGGGGGAA
AACATGGCACCAAACCCTCCGCCAACTCCTTTGCTCGAACGCGGATTTCG
TCTCGGGCACTATCCTGCGCCTTCCGGTCCGATTCCAGTGGTGCTTTCGA
GTTATTTTCGCGTTCCTTGTTTCGGGATTAGTGCATACGGGCATGGATGT
CGGGTTCGGGGTACGGATTGATGAGAGTGGGGCGTTGTGGTTCTTCGCAT
TGCAGATTCTGGGTGTAGCCGGGGAGATGCTTGCTGAGAGGTTGTTGGCT
CCGGTGAGTGTGTTCTTGTCGAGGGGGGTTAGGAGGGGAGTCGGGTTTGT
TTGGGTTGCGGTCTTTATGCTCTGGACTTTGCCGGTGTGGATTTATCCGA
TTCTGGTCCAGTTGTATGCGGATGGGGTGCGCATGATGAGTCCGTTTTTG
GGGCTGGGGGGTTGGGATGTTTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_29140ATCC64974_29140Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_29140-T1.exon1ATCC64974_29140-T1.exon1Aspergillus niger N402exon
ATCC64974_29140-T1.exon2ATCC64974_29140-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_29140-T1.cdsATCC64974_29140-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_29140-T1ATCC64974_29140-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-22)
DBxrefInterPro:IPR032805
DBxrefPFAM:PF13813
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:796962..798240 +
Powered by Drupal