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ATCC64974_29170-T1, ATCC64974_29170-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_29170-T1
Unique NameATCC64974_29170-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:802765..803384-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_29170-T1 ID=ATCC64974_29170-T1|Name=ATCC64974_29170-T1|organism=Aspergillus niger N402|type=mRNA|length=620bp|location=Sequence derived from alignment at OGUI01000004.1:802765..803384- (Aspergillus niger N402)
ATGCCCTACACCGGCCGTTGTAACTGCACCAGCATCTCCATCACCCTCCC
GGCGCAGCCGGAGAGGAGTGTAGCCTGCCACTGGTACCACCTCAAGATCA
TCCATCAGTAGGGAATCTGGACTAATCGAATGTTGCGCAGCATCAACTGC
AAGAAAGCTGGAGGAGGCTGTATGTCTCCTTTCCCCGTCCCTACCCTGCA
GTAGCCGCCCAAGACTAAACCAACCAGCCTTCTCAATCAACTACTTCATC
AATCAAGATGACATGACCATCGAAGACCCTAGCCAGGCAATGAAGATCTA
CAGCGATCCCAATACTTCTTCGGGGAACACAATTCAGGTGGGATCATATG
CAGTTCGGGGACGATAGTGGGAATTTGCTGGGCTAACTCGGTCTTTGTAG
CGCCATTTCTGCTCTAGTTGTGGAAGGTTAGTTGTTGATTGTGCTTCGTT
CCTGTAATGATTTGCTGATGCAGCTTGGACACAGCCCACTATTCACATTA
TCGCCCAAGGTGCCAGGAAAGGCGTATTTGAAGGCGGCGCTGTTTGACAG
TGTGTCAAAGCCTGAATCGGTGTTTTTCGGCGACAAGCGGGACGAGTGGG
TGGCCATTAACACGGCATAG
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Coding sequence (CDS) from alignment at OGUI01000004.1:802765..803384-

>ATCC64974_29170-T1 ID=ATCC64974_29170-T1|Name=ATCC64974_29170-T1|organism=Aspergillus niger N402|type=CDS|length=1920bp|location=Sequence derived from alignment at OGUI01000004.1:802765..803384- (Aspergillus niger N402)
CCCACTATTCACATTATCGCCCAAGGTGCCAGGAAAGGCGTATTTGAAGG
CGGCGCTGTTTGACAGTGTGTCAAAGCCTGAATCGGTGTTTTTCGGCGAC
AAGCGGGACGAGTGGGTGGCCATTAACACGGCATAGCGCCATTTCTGCTC
TAGTTGTGGAAGCCTTCTCAATCAACTACTTCATCAATCAAGATGACATG
ACCATCGAAGACCCTAGCCAGGCAATGAAGATCTACAGCGATCCCAATAC
TTCTTCGGGGAACACAATTCAGCATCAACTGCAAGAAAGCTGGAGGAGGC
TATGCCCTACACCGGCCGTTGTAACTGCACCAGCATCTCCATCACCCTCC
CGGCGCAGCCGGAGAGGAGTGTAGCCTGCCACTGCCCACTATTCACATTA
TCGCCCAAGGTGCCAGGAAAGGCGTATTTGAAGGCGGCGCTGTTTGACAG
TGTGTCAAAGCCTGAATCGGTGTTTTTCGGCGACAAGCGGGACGAGTGGG
TGGCCATTAACACGGCATAGCGCCATTTCTGCTCTAGTTGTGGAAGCCTT
CTCAATCAACTACTTCATCAATCAAGATGACATGACCATCGAAGACCCTA
GCCAGGCAATGAAGATCTACAGCGATCCCAATACTTCTTCGGGGAACACA
ATTCAGCATCAACTGCAAGAAAGCTGGAGGAGGCTATGCCCTACACCGGC
CGTTGTAACTGCACCAGCATCTCCATCACCCTCCCGGCGCAGCCGGAGAG
GAGTGTAGCCTGCCACTGCCCACTATTCACATTATCGCCCAAGGTGCCAG
GAAAGGCGTATTTGAAGGCGGCGCTGTTTGACAGTGTGTCAAAGCCTGAA
TCGGTGTTTTTCGGCGACAAGCGGGACGAGTGGGTGGCCATTAACACGGC
ATAGCGCCATTTCTGCTCTAGTTGTGGAAGCCTTCTCAATCAACTACTTC
ATCAATCAAGATGACATGACCATCGAAGACCCTAGCCAGGCAATGAAGAT
CTACAGCGATCCCAATACTTCTTCGGGGAACACAATTCAGCATCAACTGC
AAGAAAGCTGGAGGAGGCTATGCCCTACACCGGCCGTTGTAACTGCACCA
GCATCTCCATCACCCTCCCGGCGCAGCCGGAGAGGAGTGTAGCCTGCCAC
TGCCCACTATTCACATTATCGCCCAAGGTGCCAGGAAAGGCGTATTTGAA
GGCGGCGCTGTTTGACAGTGTGTCAAAGCCTGAATCGGTGTTTTTCGGCG
ACAAGCGGGACGAGTGGGTGGCCATTAACACGGCATAGCGCCATTTCTGC
TCTAGTTGTGGAAGCCTTCTCAATCAACTACTTCATCAATCAAGATGACA
TGACCATCGAAGACCCTAGCCAGGCAATGAAGATCTACAGCGATCCCAAT
ACTTCTTCGGGGAACACAATTCAGCATCAACTGCAAGAAAGCTGGAGGAG
GCTATGCCCTACACCGGCCGTTGTAACTGCACCAGCATCTCCATCACCCT
CCCGGCGCAGCCGGAGAGGAGTGTAGCCTGCCACTGCCCACTATTCACAT
TATCGCCCAAGGTGCCAGGAAAGGCGTATTTGAAGGCGGCGCTGTTTGAC
AGTGTGTCAAAGCCTGAATCGGTGTTTTTCGGCGACAAGCGGGACGAGTG
GGTGGCCATTAACACGGCATAGCGCCATTTCTGCTCTAGTTGTGGAAGCC
TTCTCAATCAACTACTTCATCAATCAAGATGACATGACCATCGAAGACCC
TAGCCAGGCAATGAAGATCTACAGCGATCCCAATACTTCTTCGGGGAACA
CAATTCAGCATCAACTGCAAGAAAGCTGGAGGAGGCTATGCCCTACACCG
GCCGTTGTAACTGCACCAGCATCTCCATCACCCTCCCGGCGCAGCCGGAG
AGGAGTGTAGCCTGCCACTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016846carbon-sulfur lyase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_29170ATCC64974_29170Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_29170-T1ATCC64974_29170-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_29170-T1.cdsATCC64974_29170-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_29170-T1.exon5ATCC64974_29170-T1.exon5Aspergillus niger N402exon
ATCC64974_29170-T1.exon4ATCC64974_29170-T1.exon4Aspergillus niger N402exon
ATCC64974_29170-T1.exon3ATCC64974_29170-T1.exon3Aspergillus niger N402exon
ATCC64974_29170-T1.exon2ATCC64974_29170-T1.exon2Aspergillus niger N402exon
ATCC64974_29170-T1.exon1ATCC64974_29170-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR011057
DBxrefInterPro:IPR006913
DBxrefPFAM:PF04828
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:802765..803384 -
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