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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000004.1:878018..880139- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_29450-T1 ID=ATCC64974_29450-T1|Name=ATCC64974_29450-T1|organism=Aspergillus niger N402|type=mRNA|length=2122bp|location=Sequence derived from alignment at OGUI01000004.1:878018..880139- (Aspergillus niger N402)
ATGCCACGATCGAGACGCTCAACTAAAGTATGTTCCCGCTGCCGGAAGCG
CAAAACGAAGGTTCGATCCCACAATACCTTCTTCCAATTATTTCTTCTGT
TGCTGTAACGTCCGTGCTACATCCATACTCCCTCTCTAACGCGGTCATGC
ACCAATAGTGTGACTTCATCTTCCCAGCATGTACTCCATGCAAACTGGCA
AATTTGCCTTGCTTGGGCTTTGATCCTAGCTCCAAGGAGGCAGTCCCCAG
AAGGTATATATCACATCTCGTCTATAGTCACTGGGGACTGACATTGTGTT
CCAAGCTTCGTCAAGTCACTCGAAGCTCAGGTGGAAGAGCTCGAAGCACG
ACTGCTTTCGTTCAACGCCGCTTCCACCAACGTTCCGTATCTCATCACTA
CGGCCGTGGCACAGGCCACCATATCCATTGGCATTCCCTTTCAGAACTCG
TTTCTCGACTCCAAAGCCTCATCTTCATTGTTCTTCCGGCCCTCCTGTCC
CCCATTGGCAATAGCCCGGGAACGGGGACAATCCACTCCTGAGAGACATC
CCAGCTTACAGAATAATCGACACAATCCCGGCGCGCCCATTAATTTACGT
AGTGTTCCATTTTCTGCAATCAATCGTATGATTCGGAATTATGTCGACAT
CCACTTGCCTCAGTACCCCTGCGTGTCAGAAAACGCGGTAAATGAAATAC
TGGACAGGATCCAGCATCAGGACCTGAAGGACCCAAATGCTCTCCCGATC
CACCATGTACCCACTGATGCTGGCCTGGGGCATTTCGAATATTTTGTATT
GCTTATCGCACTTGCAATCTCTGCGATGACATTGACCTGGAAGGCCGATT
ACCAAGCTCGAGTGGCTTCGGAGTCTTTCTATAACGCCGCCGTAAAACAC
CTACAGGCCATGACAGACCATAGCGAGATTCAGGCACTACAAATTTCTTT
GCTCCTAGCTCACTATGCGCATATGTGCCCAGAGAGGGTAGACAATTGGA
CTTGCATTTCTAACGCGGTCCGGATTGTCCTCAATCTTGGACTCTATCTG
GAGTGCAATCAACTGGTTCATGGTGAGCCTTATCAGCGAAGCGTACTATT
TTGGGTAGCGTACGGTATGGAGAGGTCATTATGTACGAACCTCCGCCTAC
CCTTATCATTTCCGGAAGAGGCAATCACGGTAAAGGTAGGTTTCCCAGAC
GACCCTCTGGCTCTTTGAGAAACTCAAGAAATTCCAGTTTCCCACAGGAG
AAGAGACAAATCTCCATACGGAACACTCCACCGGTAGGCCGTGCAAGAAG
TATGTCGCTTACCATATATGTCGGTACCGTGCACTAGAGACAGAAGTTCA
TAGAGTGCTTCATCTGGAAGAAGACTTGACCAAGTTCGGCAATAACACTA
TAGAGGAATGGATTGAAAGCATCACCCAGAGATTGGAACAGTGGTACGAG
ACGGCACAGTCGTACACAAAGTATGATATGCTTGAATTCAAACATGTGCA
GTTTCACCACCTCATGGCACGCATCCACCGGCCAACGCCGCGTCTAAGAT
TGAGAGGTCCAGACAACTGGAAAGCTGTGTTAAACGCATCATCCGTTTTG
ATACAGGACTACCTCGCTCAGGAGCGACGTCGGAGGCTGTTCTATCCTTG
GCATGGGGTACATATTCTCTTCGAAACTGCCGTCATCTCGCTGGAGGCAT
GCTGGTCAGCACGGAATTATGAACCGCTACAAGTTAGGGCTCATGAGATG
TTGCAGATCTCGATTCCTCGATGTCTTCAGCTTCTCACCAACATCGGTGA
ACGTTGGGGTGAAGCAGCCGTATGTGCTGATCGGTTAAGGCCGCTCGTTG
ATACTGTCAGGACCGCTTTTAACAATCCCGATACGCTGTTGCTGACTATG
ATTGATGAGAGTGTGATCACGGCAGAGATACTTGATTTACTTTTCACGGA
TGGGCCATTGTCATGGACCCGAGCCAACCGTGGGGAGATAATGTCTGACA
TGATTGAGAGTGATCCATGGTTAAATAGCCTGGTGGATGACAGCCTCGAA
CTTTTCTCGTGGAATCCTGAATGGTGCATCATGCCTGCTGACGCAATCTC
CATCGAGGGATATACGCTTTAA back to topCoding sequence (CDS) from alignment at OGUI01000004.1:878018..880139- >ATCC64974_29450-T1 ID=ATCC64974_29450-T1|Name=ATCC64974_29450-T1|organism=Aspergillus niger N402|type=CDS|length=7056bp|location=Sequence derived from alignment at OGUI01000004.1:878018..880139- (Aspergillus niger N402)
GAGAAGAGACAAATCTCCATACGGAACACTCCACCGGTAGGCCGTGCAAG
AAGTATGTCGCTTACCATATATGTCGGTACCGTGCACTAGAGACAGAAGT
TCATAGAGTGCTTCATCTGGAAGAAGACTTGACCAAGTTCGGCAATAACA
CTATAGAGGAATGGATTGAAAGCATCACCCAGAGATTGGAACAGTGGTAC
GAGACGGCACAGTCGTACACAAAGTATGATATGCTTGAATTCAAACATGT
GCAGTTTCACCACCTCATGGCACGCATCCACCGGCCAACGCCGCGTCTAA
GATTGAGAGGTCCAGACAACTGGAAAGCTGTGTTAAACGCATCATCCGTT
TTGATACAGGACTACCTCGCTCAGGAGCGACGTCGGAGGCTGTTCTATCC
TTGGCATGGGGTACATATTCTCTTCGAAACTGCCGTCATCTCGCTGGAGG
CATGCTGGTCAGCACGGAATTATGAACCGCTACAAGTTAGGGCTCATGAG
ATGTTGCAGATCTCGATTCCTCGATGTCTTCAGCTTCTCACCAACATCGG
TGAACGTTGGGGTGAAGCAGCCGTATGTGCTGATCGGTTAAGGCCGCTCG
TTGATACTGTCAGGACCGCTTTTAACAATCCCGATACGCTGTTGCTGACT
ATGATTGATGAGAGTGTGATCACGGCAGAGATACTTGATTTACTTTTCAC
GGATGGGCCATTGTCATGGACCCGAGCCAACCGTGGGGAGATAATGTCTG
ACATGATTGAGAGTGATCCATGGTTAAATAGCCTGGTGGATGACAGCCTC
GAACTTTTCTCGTGGAATCCTGAATGGTGCATCATGCCTGCTGACGCAAT
CTCCATCGAGGGATATACGCTTTAACTTCGTCAAGTCACTCGAAGCTCAG
GTGGAAGAGCTCGAAGCACGACTGCTTTCGTTCAACGCCGCTTCCACCAA
CGTTCCGTATCTCATCACTACGGCCGTGGCACAGGCCACCATATCCATTG
GCATTCCCTTTCAGAACTCGTTTCTCGACTCCAAAGCCTCATCTTCATTG
TTCTTCCGGCCCTCCTGTCCCCCATTGGCAATAGCCCGGGAACGGGGACA
ATCCACTCCTGAGAGACATCCCAGCTTACAGAATAATCGACACAATCCCG
GCGCGCCCATTAATTTACGTAGTGTTCCATTTTCTGCAATCAATCGTATG
ATTCGGAATTATGTCGACATCCACTTGCCTCAGTACCCCTGCGTGTCAGA
AAACGCGGTAAATGAAATACTGGACAGGATCCAGCATCAGGACCTGAAGG
ACCCAAATGCTCTCCCGATCCACCATGTACCCACTGATGCTGGCCTGGGG
CATTTCGAATATTTTGTATTGCTTATCGCACTTGCAATCTCTGCGATGAC
ATTGACCTGGAAGGCCGATTACCAAGCTCGAGTGGCTTCGGAGTCTTTCT
ATAACGCCGCCGTAAAACACCTACAGGCCATGACAGACCATAGCGAGATT
CAGGCACTACAAATTTCTTTGCTCCTAGCTCACTATGCGCATATGTGCCC
AGAGAGGGTAGACAATTGGACTTGCATTTCTAACGCGGTCCGGATTGTCC
TCAATCTTGGACTCTATCTGGAGTGCAATCAACTGGTTCATGTGTGACTT
CATCTTCCCAGCATGTACTCCATGCAAACTGGCAAATTTGCCTTGCTTGG
GCTTTGATCCTAGCTCCAAGGAGGCAGTCCCCAGAAGATGCCACGATCGA
GACGCTCAACTAAAGAGAAGAGACAAATCTCCATACGGAACACTCCACCG
GTAGGCCGTGCAAGAAGTATGTCGCTTACCATATATGTCGGTACCGTGCA
CTAGAGACAGAAGTTCATAGAGTGCTTCATCTGGAAGAAGACTTGACCAA
GTTCGGCAATAACACTATAGAGGAATGGATTGAAAGCATCACCCAGAGAT
TGGAACAGTGGTACGAGACGGCACAGTCGTACACAAAGTATGATATGCTT
GAATTCAAACATGTGCAGTTTCACCACCTCATGGCACGCATCCACCGGCC
AACGCCGCGTCTAAGATTGAGAGGTCCAGACAACTGGAAAGCTGTGTTAA
ACGCATCATCCGTTTTGATACAGGACTACCTCGCTCAGGAGCGACGTCGG
AGGCTGTTCTATCCTTGGCATGGGGTACATATTCTCTTCGAAACTGCCGT
CATCTCGCTGGAGGCATGCTGGTCAGCACGGAATTATGAACCGCTACAAG
TTAGGGCTCATGAGATGTTGCAGATCTCGATTCCTCGATGTCTTCAGCTT
CTCACCAACATCGGTGAACGTTGGGGTGAAGCAGCCGTATGTGCTGATCG
GTTAAGGCCGCTCGTTGATACTGTCAGGACCGCTTTTAACAATCCCGATA
CGCTGTTGCTGACTATGATTGATGAGAGTGTGATCACGGCAGAGATACTT
GATTTACTTTTCACGGATGGGCCATTGTCATGGACCCGAGCCAACCGTGG
GGAGATAATGTCTGACATGATTGAGAGTGATCCATGGTTAAATAGCCTGG
TGGATGACAGCCTCGAACTTTTCTCGTGGAATCCTGAATGGTGCATCATG
CCTGCTGACGCAATCTCCATCGAGGGATATACGCTTTAACTTCGTCAAGT
CACTCGAAGCTCAGGTGGAAGAGCTCGAAGCACGACTGCTTTCGTTCAAC
GCCGCTTCCACCAACGTTCCGTATCTCATCACTACGGCCGTGGCACAGGC
CACCATATCCATTGGCATTCCCTTTCAGAACTCGTTTCTCGACTCCAAAG
CCTCATCTTCATTGTTCTTCCGGCCCTCCTGTCCCCCATTGGCAATAGCC
CGGGAACGGGGACAATCCACTCCTGAGAGACATCCCAGCTTACAGAATAA
TCGACACAATCCCGGCGCGCCCATTAATTTACGTAGTGTTCCATTTTCTG
CAATCAATCGTATGATTCGGAATTATGTCGACATCCACTTGCCTCAGTAC
CCCTGCGTGTCAGAAAACGCGGTAAATGAAATACTGGACAGGATCCAGCA
TCAGGACCTGAAGGACCCAAATGCTCTCCCGATCCACCATGTACCCACTG
ATGCTGGCCTGGGGCATTTCGAATATTTTGTATTGCTTATCGCACTTGCA
ATCTCTGCGATGACATTGACCTGGAAGGCCGATTACCAAGCTCGAGTGGC
TTCGGAGTCTTTCTATAACGCCGCCGTAAAACACCTACAGGCCATGACAG
ACCATAGCGAGATTCAGGCACTACAAATTTCTTTGCTCCTAGCTCACTAT
GCGCATATGTGCCCAGAGAGGGTAGACAATTGGACTTGCATTTCTAACGC
GGTCCGGATTGTCCTCAATCTTGGACTCTATCTGGAGTGCAATCAACTGG
TTCATGTGTGACTTCATCTTCCCAGCATGTACTCCATGCAAACTGGCAAA
TTTGCCTTGCTTGGGCTTTGATCCTAGCTCCAAGGAGGCAGTCCCCAGAA
GATGCCACGATCGAGACGCTCAACTAAAGAGAAGAGACAAATCTCCATAC
GGAACACTCCACCGGTAGGCCGTGCAAGAAGTATGTCGCTTACCATATAT
GTCGGTACCGTGCACTAGAGACAGAAGTTCATAGAGTGCTTCATCTGGAA
GAAGACTTGACCAAGTTCGGCAATAACACTATAGAGGAATGGATTGAAAG
CATCACCCAGAGATTGGAACAGTGGTACGAGACGGCACAGTCGTACACAA
AGTATGATATGCTTGAATTCAAACATGTGCAGTTTCACCACCTCATGGCA
CGCATCCACCGGCCAACGCCGCGTCTAAGATTGAGAGGTCCAGACAACTG
GAAAGCTGTGTTAAACGCATCATCCGTTTTGATACAGGACTACCTCGCTC
AGGAGCGACGTCGGAGGCTGTTCTATCCTTGGCATGGGGTACATATTCTC
TTCGAAACTGCCGTCATCTCGCTGGAGGCATGCTGGTCAGCACGGAATTA
TGAACCGCTACAAGTTAGGGCTCATGAGATGTTGCAGATCTCGATTCCTC
GATGTCTTCAGCTTCTCACCAACATCGGTGAACGTTGGGGTGAAGCAGCC
GTATGTGCTGATCGGTTAAGGCCGCTCGTTGATACTGTCAGGACCGCTTT
TAACAATCCCGATACGCTGTTGCTGACTATGATTGATGAGAGTGTGATCA
CGGCAGAGATACTTGATTTACTTTTCACGGATGGGCCATTGTCATGGACC
CGAGCCAACCGTGGGGAGATAATGTCTGACATGATTGAGAGTGATCCATG
GTTAAATAGCCTGGTGGATGACAGCCTCGAACTTTTCTCGTGGAATCCTG
AATGGTGCATCATGCCTGCTGACGCAATCTCCATCGAGGGATATACGCTT
TAACTTCGTCAAGTCACTCGAAGCTCAGGTGGAAGAGCTCGAAGCACGAC
TGCTTTCGTTCAACGCCGCTTCCACCAACGTTCCGTATCTCATCACTACG
GCCGTGGCACAGGCCACCATATCCATTGGCATTCCCTTTCAGAACTCGTT
TCTCGACTCCAAAGCCTCATCTTCATTGTTCTTCCGGCCCTCCTGTCCCC
CATTGGCAATAGCCCGGGAACGGGGACAATCCACTCCTGAGAGACATCCC
AGCTTACAGAATAATCGACACAATCCCGGCGCGCCCATTAATTTACGTAG
TGTTCCATTTTCTGCAATCAATCGTATGATTCGGAATTATGTCGACATCC
ACTTGCCTCAGTACCCCTGCGTGTCAGAAAACGCGGTAAATGAAATACTG
GACAGGATCCAGCATCAGGACCTGAAGGACCCAAATGCTCTCCCGATCCA
CCATGTACCCACTGATGCTGGCCTGGGGCATTTCGAATATTTTGTATTGC
TTATCGCACTTGCAATCTCTGCGATGACATTGACCTGGAAGGCCGATTAC
CAAGCTCGAGTGGCTTCGGAGTCTTTCTATAACGCCGCCGTAAAACACCT
ACAGGCCATGACAGACCATAGCGAGATTCAGGCACTACAAATTTCTTTGC
TCCTAGCTCACTATGCGCATATGTGCCCAGAGAGGGTAGACAATTGGACT
TGCATTTCTAACGCGGTCCGGATTGTCCTCAATCTTGGACTCTATCTGGA
GTGCAATCAACTGGTTCATGTGTGACTTCATCTTCCCAGCATGTACTCCA
TGCAAACTGGCAAATTTGCCTTGCTTGGGCTTTGATCCTAGCTCCAAGGA
GGCAGTCCCCAGAAGATGCCACGATCGAGACGCTCAACTAAAGAGAAGAG
ACAAATCTCCATACGGAACACTCCACCGGTAGGCCGTGCAAGAAGTATGT
CGCTTACCATATATGTCGGTACCGTGCACTAGAGACAGAAGTTCATAGAG
TGCTTCATCTGGAAGAAGACTTGACCAAGTTCGGCAATAACACTATAGAG
GAATGGATTGAAAGCATCACCCAGAGATTGGAACAGTGGTACGAGACGGC
ACAGTCGTACACAAAGTATGATATGCTTGAATTCAAACATGTGCAGTTTC
ACCACCTCATGGCACGCATCCACCGGCCAACGCCGCGTCTAAGATTGAGA
GGTCCAGACAACTGGAAAGCTGTGTTAAACGCATCATCCGTTTTGATACA
GGACTACCTCGCTCAGGAGCGACGTCGGAGGCTGTTCTATCCTTGGCATG
GGGTACATATTCTCTTCGAAACTGCCGTCATCTCGCTGGAGGCATGCTGG
TCAGCACGGAATTATGAACCGCTACAAGTTAGGGCTCATGAGATGTTGCA
GATCTCGATTCCTCGATGTCTTCAGCTTCTCACCAACATCGGTGAACGTT
GGGGTGAAGCAGCCGTATGTGCTGATCGGTTAAGGCCGCTCGTTGATACT
GTCAGGACCGCTTTTAACAATCCCGATACGCTGTTGCTGACTATGATTGA
TGAGAGTGTGATCACGGCAGAGATACTTGATTTACTTTTCACGGATGGGC
CATTGTCATGGACCCGAGCCAACCGTGGGGAGATAATGTCTGACATGATT
GAGAGTGATCCATGGTTAAATAGCCTGGTGGATGACAGCCTCGAACTTTT
CTCGTGGAATCCTGAATGGTGCATCATGCCTGCTGACGCAATCTCCATCG
AGGGATATACGCTTTAACTTCGTCAAGTCACTCGAAGCTCAGGTGGAAGA
GCTCGAAGCACGACTGCTTTCGTTCAACGCCGCTTCCACCAACGTTCCGT
ATCTCATCACTACGGCCGTGGCACAGGCCACCATATCCATTGGCATTCCC
TTTCAGAACTCGTTTCTCGACTCCAAAGCCTCATCTTCATTGTTCTTCCG
GCCCTCCTGTCCCCCATTGGCAATAGCCCGGGAACGGGGACAATCCACTC
CTGAGAGACATCCCAGCTTACAGAATAATCGACACAATCCCGGCGCGCCC
ATTAATTTACGTAGTGTTCCATTTTCTGCAATCAATCGTATGATTCGGAA
TTATGTCGACATCCACTTGCCTCAGTACCCCTGCGTGTCAGAAAACGCGG
TAAATGAAATACTGGACAGGATCCAGCATCAGGACCTGAAGGACCCAAAT
GCTCTCCCGATCCACCATGTACCCACTGATGCTGGCCTGGGGCATTTCGA
ATATTTTGTATTGCTTATCGCACTTGCAATCTCTGCGATGACATTGACCT
GGAAGGCCGATTACCAAGCTCGAGTGGCTTCGGAGTCTTTCTATAACGCC
GCCGTAAAACACCTACAGGCCATGACAGACCATAGCGAGATTCAGGCACT
ACAAATTTCTTTGCTCCTAGCTCACTATGCGCATATGTGCCCAGAGAGGG
TAGACAATTGGACTTGCATTTCTAACGCGGTCCGGATTGTCCTCAATCTT
GGACTCTATCTGGAGTGCAATCAACTGGTTCATGTGTGACTTCATCTTCC
CAGCATGTACTCCATGCAAACTGGCAAATTTGCCTTGCTTGGGCTTTGAT
CCTAGCTCCAAGGAGGCAGTCCCCAGAAGATGCCACGATCGAGACGCTCA
ACTAAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_29450-T1 | ATCC64974_29450-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR001138 |
| DBxref | InterPro:IPR036864 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000004.1 | supercontig | OGUI01000004.1:878018..880139 - |
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