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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000004.1:928221..929273- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_29650-T1 ID=ATCC64974_29650-T1|Name=ATCC64974_29650-T1|organism=Aspergillus niger N402|type=mRNA|length=1053bp|location=Sequence derived from alignment at OGUI01000004.1:928221..929273- (Aspergillus niger N402)
ATGACAAACGAAAAACAAACCTGGTTTATTACTGGCTGCTCCAGTGGCTT
CGGGGAGCAGTTTGTACGCCAACTTCGCGAACGGGGTGACAACGTCGTCG
CCACAGGCCGGAATGCTGAGAGCAAACTTGCGCACCTGAAGGATACCGGT
GCCACTATCCTTGAACTCGATGTTACGGCACCTCAGGAAGAGCTGAACGC
GAAGTTTCAGCAGGCCATCGATATCTATGGGGGAGTCGATGTACTCGTGA
ACAACGCGGGGTACATTCAATGCGGGGCTATCGAAGAGCTCACGTGAGTT
TTGGCCTGAGGACTTCTAGTCTTTTTGTTTGATAACCTCATTTGGGAAGG
ATATGTTTGACTGACTGAGACGTTAGACCGGAGGATATGAAACGATCCCT
CGACACTAACTTCCATGGGCCTATCAACCTGACCCGCGCTGCATTGCCGC
ATTTTCGCAGCAAGGGTGAGAAGGGTCAAGGTATGATCATTTACATGGGA
TCGCAGTCTGGTTTTTGGGGAGAGCCAGCTGCATCCGCGTACTGTGCCAG
TAAATTTGCTTTAGAAGGTATGCTTTACCAGTCTGTCCATCTGCTCCTAC
ACGACAAAGCTGACAGTAAAACTATTTCCCACCACAGGAGCCGTTGAAAG
TCTCTCTAAAGAGCTAGGCTGGCTTGCACCAGGCATCAAACCCCTCATTA
TAGAAGCAGGCATCTTCAGCACTGAGGTCATGAGGAATATCAATCATGTT
CCTTACCGAGTCGATTTCTACCGGGGCCTTAACGACGCGTGTCGCGTGCG
CGGAGAAGGCAACTACCGCAACCCACCGGGCAATGCCGTGGATTTGATTG
CCAAGATCATCCAGATTGCGAAGGGAGAGGGTATTGCAGAGGGCAAAGAG
ATCCCATTGCGTGTGCCGTTTGGTAGTGATTCTCTTGGATTCCTTAAGGA
GAAGGCGCGGGATATGATGCGCATTGCAGAGGAATGGGAAGAGATTGCCC
GCAGCACTGATTTCCCAGATCACAAGGGACCTATGCCAGATATACCGGCT
TGA back to topCoding sequence (CDS) from alignment at OGUI01000004.1:928221..929273- >ATCC64974_29650-T1 ID=ATCC64974_29650-T1|Name=ATCC64974_29650-T1|organism=Aspergillus niger N402|type=CDS|length=2700bp|location=Sequence derived from alignment at OGUI01000004.1:928221..929273- (Aspergillus niger N402)
GAGCCGTTGAAAGTCTCTCTAAAGAGCTAGGCTGGCTTGCACCAGGCATC
AAACCCCTCATTATAGAAGCAGGCATCTTCAGCACTGAGGTCATGAGGAA
TATCAATCATGTTCCTTACCGAGTCGATTTCTACCGGGGCCTTAACGACG
CGTGTCGCGTGCGCGGAGAAGGCAACTACCGCAACCCACCGGGCAATGCC
GTGGATTTGATTGCCAAGATCATCCAGATTGCGAAGGGAGAGGGTATTGC
AGAGGGCAAAGAGATCCCATTGCGTGTGCCGTTTGGTAGTGATTCTCTTG
GATTCCTTAAGGAGAAGGCGCGGGATATGATGCGCATTGCAGAGGAATGG
GAAGAGATTGCCCGCAGCACTGATTTCCCAGATCACAAGGGACCTATGCC
AGATATACCGGCTTGAACCGGAGGATATGAAACGATCCCTCGACACTAAC
TTCCATGGGCCTATCAACCTGACCCGCGCTGCATTGCCGCATTTTCGCAG
CAAGGGTGAGAAGGGTCAAGGTATGATCATTTACATGGGATCGCAGTCTG
GTTTTTGGGGAGAGCCAGCTGCATCCGCGTACTGTGCCAGTAAATTTGCT
TTAGAAGATGACAAACGAAAAACAAACCTGGTTTATTACTGGCTGCTCCA
GTGGCTTCGGGGAGCAGTTTGTACGCCAACTTCGCGAACGGGGTGACAAC
GTCGTCGCCACAGGCCGGAATGCTGAGAGCAAACTTGCGCACCTGAAGGA
TACCGGTGCCACTATCCTTGAACTCGATGTTACGGCACCTCAGGAAGAGC
TGAACGCGAAGTTTCAGCAGGCCATCGATATCTATGGGGGAGTCGATGTA
CTCGTGAACAACGCGGGGTACATTCAATGCGGGGCTATCGAAGAGCTCAC
GAGCCGTTGAAAGTCTCTCTAAAGAGCTAGGCTGGCTTGCACCAGGCATC
AAACCCCTCATTATAGAAGCAGGCATCTTCAGCACTGAGGTCATGAGGAA
TATCAATCATGTTCCTTACCGAGTCGATTTCTACCGGGGCCTTAACGACG
CGTGTCGCGTGCGCGGAGAAGGCAACTACCGCAACCCACCGGGCAATGCC
GTGGATTTGATTGCCAAGATCATCCAGATTGCGAAGGGAGAGGGTATTGC
AGAGGGCAAAGAGATCCCATTGCGTGTGCCGTTTGGTAGTGATTCTCTTG
GATTCCTTAAGGAGAAGGCGCGGGATATGATGCGCATTGCAGAGGAATGG
GAAGAGATTGCCCGCAGCACTGATTTCCCAGATCACAAGGGACCTATGCC
AGATATACCGGCTTGAACCGGAGGATATGAAACGATCCCTCGACACTAAC
TTCCATGGGCCTATCAACCTGACCCGCGCTGCATTGCCGCATTTTCGCAG
CAAGGGTGAGAAGGGTCAAGGTATGATCATTTACATGGGATCGCAGTCTG
GTTTTTGGGGAGAGCCAGCTGCATCCGCGTACTGTGCCAGTAAATTTGCT
TTAGAAGATGACAAACGAAAAACAAACCTGGTTTATTACTGGCTGCTCCA
GTGGCTTCGGGGAGCAGTTTGTACGCCAACTTCGCGAACGGGGTGACAAC
GTCGTCGCCACAGGCCGGAATGCTGAGAGCAAACTTGCGCACCTGAAGGA
TACCGGTGCCACTATCCTTGAACTCGATGTTACGGCACCTCAGGAAGAGC
TGAACGCGAAGTTTCAGCAGGCCATCGATATCTATGGGGGAGTCGATGTA
CTCGTGAACAACGCGGGGTACATTCAATGCGGGGCTATCGAAGAGCTCAC
GAGCCGTTGAAAGTCTCTCTAAAGAGCTAGGCTGGCTTGCACCAGGCATC
AAACCCCTCATTATAGAAGCAGGCATCTTCAGCACTGAGGTCATGAGGAA
TATCAATCATGTTCCTTACCGAGTCGATTTCTACCGGGGCCTTAACGACG
CGTGTCGCGTGCGCGGAGAAGGCAACTACCGCAACCCACCGGGCAATGCC
GTGGATTTGATTGCCAAGATCATCCAGATTGCGAAGGGAGAGGGTATTGC
AGAGGGCAAAGAGATCCCATTGCGTGTGCCGTTTGGTAGTGATTCTCTTG
GATTCCTTAAGGAGAAGGCGCGGGATATGATGCGCATTGCAGAGGAATGG
GAAGAGATTGCCCGCAGCACTGATTTCCCAGATCACAAGGGACCTATGCC
AGATATACCGGCTTGAACCGGAGGATATGAAACGATCCCTCGACACTAAC
TTCCATGGGCCTATCAACCTGACCCGCGCTGCATTGCCGCATTTTCGCAG
CAAGGGTGAGAAGGGTCAAGGTATGATCATTTACATGGGATCGCAGTCTG
GTTTTTGGGGAGAGCCAGCTGCATCCGCGTACTGTGCCAGTAAATTTGCT
TTAGAAGATGACAAACGAAAAACAAACCTGGTTTATTACTGGCTGCTCCA
GTGGCTTCGGGGAGCAGTTTGTACGCCAACTTCGCGAACGGGGTGACAAC
GTCGTCGCCACAGGCCGGAATGCTGAGAGCAAACTTGCGCACCTGAAGGA
TACCGGTGCCACTATCCTTGAACTCGATGTTACGGCACCTCAGGAAGAGC
TGAACGCGAAGTTTCAGCAGGCCATCGATATCTATGGGGGAGTCGATGTA
CTCGTGAACAACGCGGGGTACATTCAATGCGGGGCTATCGAAGAGCTCAC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_29650-T1 | ATCC64974_29650-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000041.3 |
| Note | EggNog:ENOG41 |
| Note | SMCOG1001:short-chain dehydrogenase/reductase SDR |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | putative secondary metabolism biosynthetic enzyme |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000004.1 | supercontig | OGUI01000004.1:928221..929273 - |
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