|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000004.1:987636..989430- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_29800-T2 ID=ATCC64974_29800-T2|Name=ATCC64974_29800-T2|organism=Aspergillus niger N402|type=mRNA|length=1795bp|location=Sequence derived from alignment at OGUI01000004.1:987636..989430- (Aspergillus niger N402)
ATGGGTCTCTCCAAGACAAACAGGATCTTGATCCTGTTGGCGATTGATAC
GGCATTTTTCTTGTTGGAATTGATTGCCGGTTTGTCTTCATACTGTTATA
AGCTCCCAGGCGCCTCTAACGATAATTTTCCGCGCAGGTTATTCTGTTCA
CTCCCTTGCCCTGGTTGCCGACTCGTTTCACATGGTACGCTTGGCCTCAT
CCTTCTACCCGAAAGCCCTAGGTAGCATAATTCTGACGAGTATCGGTACA
GCTGAATGATGTATTATCACTGTGTGTGGGACTCTGGGCTGTCAAGGTCG
CCAACCGCGAAACCAACTCGAAAATGTACACTTACGGGGTAAGCTTGACT
CACTCCCACATATCCACTGCTCATCCTGACGGTCTGGTTATCTAGTGGCA
ACGCGCAGAAACTCTTGGTGCCTTAGTCAATGGCGTCTTCCTGGTCGCCC
TGTGTCTATCGATTTTCCTGGAAGCTATACAAAGACTCGTTGAGCCTCAG
GAAGTCAAAAACCCGAAATTCGTCTGCATCGTCGGATGTCTCGGCTTGTT
GTCAAACATAATTGGCCTTGTGCTGTTCCATGACCACTCCCACGGGCACG
GCCACAGTCATGGCCCTGGAGATCTGGAAGAAGGCGCAGATGTTGATCAT
GTGCACGCTGGGGAGCATGACCACGATCATGACCACGTGCACGCAGATGG
CCAGAATAACGTTAGTGGACCAGTATCTATCAAATCTATGAAGCTGACAA
CATGTGGATTAAGCAGACTGGTGGTGCCGAGCCACACTCTCCCTATTCGC
GTCGCCGCCGGACCCTCGATAGTCAACGTCGTCGCTACAGTGGATATGTT
GACCCGGCAGACATCCAGATTCACCCCGCTAGTATGAGACAGGAGATTAT
CGCAGCCAGTAAAACCCGTTATGATGATGAACAATCCGGCTCGGACAGCG
AGTTCCAAGAGGGCGCCGATAGCCAGCCATCTGAGCGCTCAGCCCTCCTT
GGTCAAGGCGGTCGTACTGGTAAATATACCGACGAGACGGAGTCATCTGC
CCGATCCCGGACTGCGGCAGCTGATGAGGATCTCCACAAATTCCACAACC
ATGCTCAACCAAAGCCCAAAGACGAAAAGCATGGCCATGGCCATGGTCAC
GATCTCAATATGCGGGGCGTTTTCCTTCATGTGATGGGCGATGCACTGGG
CAACATCGGCGTCATCGCTTCTGCTCTTATCATCTGGTTGACCGATTATT
CTTGGAGATTCTACGTGGATCCTGGGATTTCGCTTGTTATCACTGTGATC
ATTCTGCTCTCCGCCATTCCCCTATGCAAGGCTGCGTCCCGAATTCTCTT
GCAGGCAGCGCCCCACGGCCTGAGCATCGACCATATCAAGGAGGACATCG
AAGGACTTCCAGGCGTCATCGGCTCCCACCACCTGCACGTATGGCAGCTG
AGCGACACCAAGTTAGTCGCCTCTATCCATATCCAAGTGGACACGGAGAT
CAAGGGCGAAGGCTCAGAACGCTATATGCGTCTGGCCAGGCAAGTGAGGA
AGTGCTTGCACGCTTATGGAATCCATTCGTCGACGATCCAGCCGGAGTTT
GCGCCTGACAGTGACACTGAGGACACAATTGCGGCCCCCTCGGACTGCCG
TGGCGGCAGCAACGGAGCCTCCGCCTCGGGGACGCTTCCCAGTCGAGCAC
CCAGTGTACCTGATGGTGATCCGCAGGCGTGCCTCCTGGAATGTGGCGAG
GAGTGTGCCAGGGGTGGCCAGTGTTGCCCCAAGCAATCGCCGTGA back to topCoding sequence (CDS) from alignment at OGUI01000004.1:987636..989430- >ATCC64974_29800-T2 ID=ATCC64974_29800-T2|Name=ATCC64974_29800-T2|organism=Aspergillus niger N402|type=CDS|length=7800bp|location=Sequence derived from alignment at OGUI01000004.1:987636..989430- (Aspergillus niger N402)
CAGACTGGTGGTGCCGAGCCACACTCTCCCTATTCGCGTCGCCGCCGGAC
CCTCGATAGTCAACGTCGTCGCTACAGTGGATATGTTGACCCGGCAGACA
TCCAGATTCACCCCGCTAGTATGAGACAGGAGATTATCGCAGCCAGTAAA
ACCCGTTATGATGATGAACAATCCGGCTCGGACAGCGAGTTCCAAGAGGG
CGCCGATAGCCAGCCATCTGAGCGCTCAGCCCTCCTTGGTCAAGGCGGTC
GTACTGGTAAATATACCGACGAGACGGAGTCATCTGCCCGATCCCGGACT
GCGGCAGCTGATGAGGATCTCCACAAATTCCACAACCATGCTCAACCAAA
GCCCAAAGACGAAAAGCATGGCCATGGCCATGGTCACGATCTCAATATGC
GGGGCGTTTTCCTTCATGTGATGGGCGATGCACTGGGCAACATCGGCGTC
ATCGCTTCTGCTCTTATCATCTGGTTGACCGATTATTCTTGGAGATTCTA
CGTGGATCCTGGGATTTCGCTTGTTATCACTGTGATCATTCTGCTCTCCG
CCATTCCCCTATGCAAGGCTGCGTCCCGAATTCTCTTGCAGGCAGCGCCC
CACGGCCTGAGCATCGACCATATCAAGGAGGACATCGAAGGACTTCCAGG
CGTCATCGGCTCCCACCACCTGCACGTATGGCAGCTGAGCGACACCAAGT
TAGTCGCCTCTATCCATATCCAAGTGGACACGGAGATCAAGGGCGAAGGC
TCAGAACGCTATATGCGTCTGGCCAGGCAAGTGAGGAAGTGCTTGCACGC
TTATGGAATCCATTCGTCGACGATCCAGCCGGAGTTTGCGCCTGACAGTG
ACACTGAGGACACAATTGCGGCCCCCTCGGACTGCCGTGGCGGCAGCAAC
GGAGCCTCCGCCTCGGGGACGCTTCCCAGTCGAGCACCCAGTGTACCTGA
TGGTGATCCGCAGGCGTGCCTCCTGGAATGTGGCGAGGAGTGTGCCAGGG
GTGGCCAGTGTTGCCCCAAGCAATCGCCGTGATGGCAACGCGCAGAAACT
CTTGGTGCCTTAGTCAATGGCGTCTTCCTGGTCGCCCTGTGTCTATCGAT
TTTCCTGGAAGCTATACAAAGACTCGTTGAGCCTCAGGAAGTCAAAAACC
CGAAATTCGTCTGCATCGTCGGATGTCTCGGCTTGTTGTCAAACATAATT
GGCCTTGTGCTGTTCCATGACCACTCCCACGGGCACGGCCACAGTCATGG
CCCTGGAGATCTGGAAGAAGGCGCAGATGTTGATCATGTGCACGCTGGGG
AGCATGACCACGATCATGACCACGTGCACGCAGATGGCCAGAATAACCTG
AATGATGTATTATCACTGTGTGTGGGACTCTGGGCTGTCAAGGTCGCCAA
CCGCGAAACCAACTCGAAAATGTACACTTACGGGGTTATTCTGTTCACTC
CCTTGCCCTGGTTGCCGACTCGTTTCACATGATGGGTCTCTCCAAGACAA
ACAGGATCTTGATCCTGTTGGCGATTGATACGGCATTTTTCTTGTTGGAA
TTGATTGCCGCAGACTGGTGGTGCCGAGCCACACTCTCCCTATTCGCGTC
GCCGCCGGACCCTCGATAGTCAACGTCGTCGCTACAGTGGATATGTTGAC
CCGGCAGACATCCAGATTCACCCCGCTAGTATGAGACAGGAGATTATCGC
AGCCAGTAAAACCCGTTATGATGATGAACAATCCGGCTCGGACAGCGAGT
TCCAAGAGGGCGCCGATAGCCAGCCATCTGAGCGCTCAGCCCTCCTTGGT
CAAGGCGGTCGTACTGGTAAATATACCGACGAGACGGAGTCATCTGCCCG
ATCCCGGACTGCGGCAGCTGATGAGGATCTCCACAAATTCCACAACCATG
CTCAACCAAAGCCCAAAGACGAAAAGCATGGCCATGGCCATGGTCACGAT
CTCAATATGCGGGGCGTTTTCCTTCATGTGATGGGCGATGCACTGGGCAA
CATCGGCGTCATCGCTTCTGCTCTTATCATCTGGTTGACCGATTATTCTT
GGAGATTCTACGTGGATCCTGGGATTTCGCTTGTTATCACTGTGATCATT
CTGCTCTCCGCCATTCCCCTATGCAAGGCTGCGTCCCGAATTCTCTTGCA
GGCAGCGCCCCACGGCCTGAGCATCGACCATATCAAGGAGGACATCGAAG
GACTTCCAGGCGTCATCGGCTCCCACCACCTGCACGTATGGCAGCTGAGC
GACACCAAGTTAGTCGCCTCTATCCATATCCAAGTGGACACGGAGATCAA
GGGCGAAGGCTCAGAACGCTATATGCGTCTGGCCAGGCAAGTGAGGAAGT
GCTTGCACGCTTATGGAATCCATTCGTCGACGATCCAGCCGGAGTTTGCG
CCTGACAGTGACACTGAGGACACAATTGCGGCCCCCTCGGACTGCCGTGG
CGGCAGCAACGGAGCCTCCGCCTCGGGGACGCTTCCCAGTCGAGCACCCA
GTGTACCTGATGGTGATCCGCAGGCGTGCCTCCTGGAATGTGGCGAGGAG
TGTGCCAGGGGTGGCCAGTGTTGCCCCAAGCAATCGCCGTGATGGCAACG
CGCAGAAACTCTTGGTGCCTTAGTCAATGGCGTCTTCCTGGTCGCCCTGT
GTCTATCGATTTTCCTGGAAGCTATACAAAGACTCGTTGAGCCTCAGGAA
GTCAAAAACCCGAAATTCGTCTGCATCGTCGGATGTCTCGGCTTGTTGTC
AAACATAATTGGCCTTGTGCTGTTCCATGACCACTCCCACGGGCACGGCC
ACAGTCATGGCCCTGGAGATCTGGAAGAAGGCGCAGATGTTGATCATGTG
CACGCTGGGGAGCATGACCACGATCATGACCACGTGCACGCAGATGGCCA
GAATAACCTGAATGATGTATTATCACTGTGTGTGGGACTCTGGGCTGTCA
AGGTCGCCAACCGCGAAACCAACTCGAAAATGTACACTTACGGGGTTATT
CTGTTCACTCCCTTGCCCTGGTTGCCGACTCGTTTCACATGATGGGTCTC
TCCAAGACAAACAGGATCTTGATCCTGTTGGCGATTGATACGGCATTTTT
CTTGTTGGAATTGATTGCCGCAGACTGGTGGTGCCGAGCCACACTCTCCC
TATTCGCGTCGCCGCCGGACCCTCGATAGTCAACGTCGTCGCTACAGTGG
ATATGTTGACCCGGCAGACATCCAGATTCACCCCGCTAGTATGAGACAGG
AGATTATCGCAGCCAGTAAAACCCGTTATGATGATGAACAATCCGGCTCG
GACAGCGAGTTCCAAGAGGGCGCCGATAGCCAGCCATCTGAGCGCTCAGC
CCTCCTTGGTCAAGGCGGTCGTACTGGTAAATATACCGACGAGACGGAGT
CATCTGCCCGATCCCGGACTGCGGCAGCTGATGAGGATCTCCACAAATTC
CACAACCATGCTCAACCAAAGCCCAAAGACGAAAAGCATGGCCATGGCCA
TGGTCACGATCTCAATATGCGGGGCGTTTTCCTTCATGTGATGGGCGATG
CACTGGGCAACATCGGCGTCATCGCTTCTGCTCTTATCATCTGGTTGACC
GATTATTCTTGGAGATTCTACGTGGATCCTGGGATTTCGCTTGTTATCAC
TGTGATCATTCTGCTCTCCGCCATTCCCCTATGCAAGGCTGCGTCCCGAA
TTCTCTTGCAGGCAGCGCCCCACGGCCTGAGCATCGACCATATCAAGGAG
GACATCGAAGGACTTCCAGGCGTCATCGGCTCCCACCACCTGCACGTATG
GCAGCTGAGCGACACCAAGTTAGTCGCCTCTATCCATATCCAAGTGGACA
CGGAGATCAAGGGCGAAGGCTCAGAACGCTATATGCGTCTGGCCAGGCAA
GTGAGGAAGTGCTTGCACGCTTATGGAATCCATTCGTCGACGATCCAGCC
GGAGTTTGCGCCTGACAGTGACACTGAGGACACAATTGCGGCCCCCTCGG
ACTGCCGTGGCGGCAGCAACGGAGCCTCCGCCTCGGGGACGCTTCCCAGT
CGAGCACCCAGTGTACCTGATGGTGATCCGCAGGCGTGCCTCCTGGAATG
TGGCGAGGAGTGTGCCAGGGGTGGCCAGTGTTGCCCCAAGCAATCGCCGT
GATGGCAACGCGCAGAAACTCTTGGTGCCTTAGTCAATGGCGTCTTCCTG
GTCGCCCTGTGTCTATCGATTTTCCTGGAAGCTATACAAAGACTCGTTGA
GCCTCAGGAAGTCAAAAACCCGAAATTCGTCTGCATCGTCGGATGTCTCG
GCTTGTTGTCAAACATAATTGGCCTTGTGCTGTTCCATGACCACTCCCAC
GGGCACGGCCACAGTCATGGCCCTGGAGATCTGGAAGAAGGCGCAGATGT
TGATCATGTGCACGCTGGGGAGCATGACCACGATCATGACCACGTGCACG
CAGATGGCCAGAATAACCTGAATGATGTATTATCACTGTGTGTGGGACTC
TGGGCTGTCAAGGTCGCCAACCGCGAAACCAACTCGAAAATGTACACTTA
CGGGGTTATTCTGTTCACTCCCTTGCCCTGGTTGCCGACTCGTTTCACAT
GATGGGTCTCTCCAAGACAAACAGGATCTTGATCCTGTTGGCGATTGATA
CGGCATTTTTCTTGTTGGAATTGATTGCCGCAGACTGGTGGTGCCGAGCC
ACACTCTCCCTATTCGCGTCGCCGCCGGACCCTCGATAGTCAACGTCGTC
GCTACAGTGGATATGTTGACCCGGCAGACATCCAGATTCACCCCGCTAGT
ATGAGACAGGAGATTATCGCAGCCAGTAAAACCCGTTATGATGATGAACA
ATCCGGCTCGGACAGCGAGTTCCAAGAGGGCGCCGATAGCCAGCCATCTG
AGCGCTCAGCCCTCCTTGGTCAAGGCGGTCGTACTGGTAAATATACCGAC
GAGACGGAGTCATCTGCCCGATCCCGGACTGCGGCAGCTGATGAGGATCT
CCACAAATTCCACAACCATGCTCAACCAAAGCCCAAAGACGAAAAGCATG
GCCATGGCCATGGTCACGATCTCAATATGCGGGGCGTTTTCCTTCATGTG
ATGGGCGATGCACTGGGCAACATCGGCGTCATCGCTTCTGCTCTTATCAT
CTGGTTGACCGATTATTCTTGGAGATTCTACGTGGATCCTGGGATTTCGC
TTGTTATCACTGTGATCATTCTGCTCTCCGCCATTCCCCTATGCAAGGCT
GCGTCCCGAATTCTCTTGCAGGCAGCGCCCCACGGCCTGAGCATCGACCA
TATCAAGGAGGACATCGAAGGACTTCCAGGCGTCATCGGCTCCCACCACC
TGCACGTATGGCAGCTGAGCGACACCAAGTTAGTCGCCTCTATCCATATC
CAAGTGGACACGGAGATCAAGGGCGAAGGCTCAGAACGCTATATGCGTCT
GGCCAGGCAAGTGAGGAAGTGCTTGCACGCTTATGGAATCCATTCGTCGA
CGATCCAGCCGGAGTTTGCGCCTGACAGTGACACTGAGGACACAATTGCG
GCCCCCTCGGACTGCCGTGGCGGCAGCAACGGAGCCTCCGCCTCGGGGAC
GCTTCCCAGTCGAGCACCCAGTGTACCTGATGGTGATCCGCAGGCGTGCC
TCCTGGAATGTGGCGAGGAGTGTGCCAGGGGTGGCCAGTGTTGCCCCAAG
CAATCGCCGTGATGGCAACGCGCAGAAACTCTTGGTGCCTTAGTCAATGG
CGTCTTCCTGGTCGCCCTGTGTCTATCGATTTTCCTGGAAGCTATACAAA
GACTCGTTGAGCCTCAGGAAGTCAAAAACCCGAAATTCGTCTGCATCGTC
GGATGTCTCGGCTTGTTGTCAAACATAATTGGCCTTGTGCTGTTCCATGA
CCACTCCCACGGGCACGGCCACAGTCATGGCCCTGGAGATCTGGAAGAAG
GCGCAGATGTTGATCATGTGCACGCTGGGGAGCATGACCACGATCATGAC
CACGTGCACGCAGATGGCCAGAATAACCTGAATGATGTATTATCACTGTG
TGTGGGACTCTGGGCTGTCAAGGTCGCCAACCGCGAAACCAACTCGAAAA
TGTACACTTACGGGGTTATTCTGTTCACTCCCTTGCCCTGGTTGCCGACT
CGTTTCACATGATGGGTCTCTCCAAGACAAACAGGATCTTGATCCTGTTG
GCGATTGATACGGCATTTTTCTTGTTGGAATTGATTGCCGCAGACTGGTG
GTGCCGAGCCACACTCTCCCTATTCGCGTCGCCGCCGGACCCTCGATAGT
CAACGTCGTCGCTACAGTGGATATGTTGACCCGGCAGACATCCAGATTCA
CCCCGCTAGTATGAGACAGGAGATTATCGCAGCCAGTAAAACCCGTTATG
ATGATGAACAATCCGGCTCGGACAGCGAGTTCCAAGAGGGCGCCGATAGC
CAGCCATCTGAGCGCTCAGCCCTCCTTGGTCAAGGCGGTCGTACTGGTAA
ATATACCGACGAGACGGAGTCATCTGCCCGATCCCGGACTGCGGCAGCTG
ATGAGGATCTCCACAAATTCCACAACCATGCTCAACCAAAGCCCAAAGAC
GAAAAGCATGGCCATGGCCATGGTCACGATCTCAATATGCGGGGCGTTTT
CCTTCATGTGATGGGCGATGCACTGGGCAACATCGGCGTCATCGCTTCTG
CTCTTATCATCTGGTTGACCGATTATTCTTGGAGATTCTACGTGGATCCT
GGGATTTCGCTTGTTATCACTGTGATCATTCTGCTCTCCGCCATTCCCCT
ATGCAAGGCTGCGTCCCGAATTCTCTTGCAGGCAGCGCCCCACGGCCTGA
GCATCGACCATATCAAGGAGGACATCGAAGGACTTCCAGGCGTCATCGGC
TCCCACCACCTGCACGTATGGCAGCTGAGCGACACCAAGTTAGTCGCCTC
TATCCATATCCAAGTGGACACGGAGATCAAGGGCGAAGGCTCAGAACGCT
ATATGCGTCTGGCCAGGCAAGTGAGGAAGTGCTTGCACGCTTATGGAATC
CATTCGTCGACGATCCAGCCGGAGTTTGCGCCTGACAGTGACACTGAGGA
CACAATTGCGGCCCCCTCGGACTGCCGTGGCGGCAGCAACGGAGCCTCCG
CCTCGGGGACGCTTCCCAGTCGAGCACCCAGTGTACCTGATGGTGATCCG
CAGGCGTGCCTCCTGGAATGTGGCGAGGAGTGTGCCAGGGGTGGCCAGTG
TTGCCCCAAGCAATCGCCGTGATGGCAACGCGCAGAAACTCTTGGTGCCT
TAGTCAATGGCGTCTTCCTGGTCGCCCTGTGTCTATCGATTTTCCTGGAA
GCTATACAAAGACTCGTTGAGCCTCAGGAAGTCAAAAACCCGAAATTCGT
CTGCATCGTCGGATGTCTCGGCTTGTTGTCAAACATAATTGGCCTTGTGC
TGTTCCATGACCACTCCCACGGGCACGGCCACAGTCATGGCCCTGGAGAT
CTGGAAGAAGGCGCAGATGTTGATCATGTGCACGCTGGGGAGCATGACCA
CGATCATGACCACGTGCACGCAGATGGCCAGAATAACCTGAATGATGTAT
TATCACTGTGTGTGGGACTCTGGGCTGTCAAGGTCGCCAACCGCGAAACC
AACTCGAAAATGTACACTTACGGGGTTATTCTGTTCACTCCCTTGCCCTG
GTTGCCGACTCGTTTCACATGATGGGTCTCTCCAAGACAAACAGGATCTT
GATCCTGTTGGCGATTGATACGGCATTTTTCTTGTTGGAATTGATTGCCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008324 | cation transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
| GO:0006812 | cation transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_29800-T2 | ATCC64974_29800-T2-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036837 |
| DBxref | InterPro:IPR027469 |
| DBxref | InterPro:IPR002524 |
| DBxref | PFAM:PF01545 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000004.1 | supercontig | OGUI01000004.1:987636..989430 - |
|
