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ATCC64974_29890-T1, ATCC64974_29890-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_29890-T1
Unique NameATCC64974_29890-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:1007069..1008894+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_29890-T1 ID=ATCC64974_29890-T1|Name=ATCC64974_29890-T1|organism=Aspergillus niger N402|type=mRNA|length=1826bp|location=Sequence derived from alignment at OGUI01000004.1:1007069..1008894+ (Aspergillus niger N402)
ATGGCTCCCATCTCTATCGCAGACATCGTCGCCGCTCTGCCGGCCGAAGA
CACCTGGGGCCCCGCTACCGCCAGCGACAACATGCTGCAGGGCGTCCCCT
ACGCTCCCTTCTCCAAGGGTGACAAGCTGGGTCGTATGGCTGACTGGACT
GCCGAGTCCAAGGACCCTAACCGTGCCGGTCGCCAGGCCTACAACCGCAA
CTACAGAGGTATACCTTTATCCTAAATATATCCTAGCCAAGCCAAGACCA
AGCAACTAACTGTTTCCCTCCAGACCAGCAAGTCTACGGTGCCGGTTCCT
CCAGCCTCTTCGCCGTCCAGGTCGCCGAAGACGAATCTTCCTTCTCCGTT
GTCGACAACACCCGCAGCTCCGCTAAGCGTACCTTCGGCCGTGGCGGTGG
TACCGTCTTCCGTGGCCGCGCCCAGCGCGGTGGTGCCCAGCGCGGTGGTC
GTGCCGGCTTCCAGCGCGTGGGCGCTGGCCGTGGCCAGGGTGGTGACCGC
TACTACGACAACCGTTCTGGTGGCCGCGGCAACCGTGGCCGTCGCTTCGG
CTGGAAGGACTACGACAAGCCCCAGCGCACCCGTGAGCCTTCGGTCAACG
TCCGCCCCGACTGGAACATGCTGGAGGAGGTTGACTTCAGCCGTCTGTCC
AAGCTGAACCTCGAGGCCCCCGAGGGTGAGGACGTCGACTCGTATGGTTT
CCTCTACCACTACGACCGGTCCTACGACAAGGCGCCCGTCAAGAACGCCG
AGCGCCGTCTCCAGTCCCTCGACCGTGCCGCCTACAACGTCACCACCACC
CAGGACCCCGTCATCCAGGAACTGGCCGAGAAGAACGAGGCCACCATCTT
CGCCACCTCGGACATCCTGTCCATGCTCATGTGCGCCCCCCGCAGTGTCT
ACTCCTGGGATATCGTCATCGTCCACCAGGGCAACAAGATCTACTTCGAC
AAGCGCGAAGGCGCCTCCCTGGACCTGGTCACCGTTAACGAGAACGCCGC
CGACGCTCCCCTCGAGCTGGCCGACTCCGCCAACAAGCAGGATGCCATCA
ACACCCCCAGCGCCCTGGCCATGGAAGCAACCTTCATCAACCACAACTTC
GCCCTGCAGACCGTTGTCGAGTCCGAGGACAGCAAGGTCTCCCTGGCCCA
CCCTAACCCCTTCTACAACGCCGCCGAGGAGACCGAGCCCCTCGCCTCCA
AGGCCTACAAGTACCGTCGCTTCGATCTCTCCCTGGAGCGCGACGACGAG
CCCGTCAACATGATCGTTCGTACCGAAGTCGACGCCATCATGAAGAACCC
CGTCAACGGCGAGGACCAGCAGCTGCTCGTCAAGGCCCTCAACGAGTTCG
ACAGCAAGGCCCAGGGCTCCGGCGGTGCCCTCGACTGGCGCAGCAAGCTC
TGGTCCCAGCGCGGTGCCGTTGTTGCTACTGAGATGAAGAACAACAGCGT
CAAGCTCGCCCGCTGGACCACCCAGGCCATCCTCGCCAAGGCTGACGGCA
TGAAGCTGGGTTTCGTCTCTCGTGCTAACCCCCGCTCGGCCGCTGGTCAC
GTCGTCCTCGGTGTTGTCGGCTACAAGCCCCGTGATCTGGCTGCCCAGAT
GAACCTGAACCTCGGCAACGGTTGGGGTATCGTGCGTACTATCGTCGACC
GCATCCGTGCCCTCGATGCCGATGAGGATGAGGACAAGGTCACCAAGTAC
GTCCTTATCAAGGACCCCAACCGTCCTGTGCTGCGTCTGTACAGCGTCCC
TGCTACTACCTTTGAGGAGGAAGAGGAGGTCGCTGCTGAGGAGCAGGAGG
CTGCTGAGGAGGAGGCTGAGGAGTAA
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Coding sequence (CDS) from alignment at OGUI01000004.1:1007069..1008894+

>ATCC64974_29890-T1 ID=ATCC64974_29890-T1|Name=ATCC64974_29890-T1|organism=Aspergillus niger N402|type=CDS|length=3522bp|location=Sequence derived from alignment at OGUI01000004.1:1007069..1008894+ (Aspergillus niger N402)
ATGGCTCCCATCTCTATCGCAGACATCGTCGCCGCTCTGCCGGCCGAAGA
CACCTGGGGCCCCGCTACCGCCAGCGACAACATGCTGCAGGGCGTCCCCT
ACGCTCCCTTCTCCAAGGGTGACAAGCTGGGTCGTATGGCTGACTGGACT
GCCGAGTCCAAGGACCCTAACCGTGCCGGTCGCCAGGCCTACAACCGCAA
CTACAGAGACCAGCAAGTCTACGGTGCCGGTTCCTCCAGCCTCTTCGCCG
TCCAGGTCGCCGAAGACGAATCTTCCTTCTCCGTTGTCGACAACACCCGC
AGCTCCGCTAAGCGTACCTTCGGCCGTGGCGGTGGTACCGTCTTCCGTGG
CCGCGCCCAGCGCGGTGGTGCCCAGCGCGGTGGTCGTGCCGGCTTCCAGC
GCGTGGGCGCTGGCCGTGGCCAGGGTGGTGACCGCTACTACGACAACCGT
TCTGGTGGCCGCGGCAACCGTGGCCGTCGCTTCGGCTGGAAGGACTACGA
CAAGCCCCAGCGCACCCGTGAGCCTTCGGTCAACGTCCGCCCCGACTGGA
ACATGCTGGAGGAGGTTGACTTCAGCCGTCTGTCCAAGCTGAACCTCGAG
GCCCCCGAGGGTGAGGACGTCGACTCGTATGGTTTCCTCTACCACTACGA
CCGGTCCTACGACAAGGCGCCCGTCAAGAACGCCGAGCGCCGTCTCCAGT
CCCTCGACCGTGCCGCCTACAACGTCACCACCACCCAGGACCCCGTCATC
CAGGAACTGGCCGAGAAGAACGAGGCCACCATCTTCGCCACCTCGGACAT
CCTGTCCATGCTCATGTGCGCCCCCCGCAGTGTCTACTCCTGGGATATCG
TCATCGTCCACCAGGGCAACAAGATCTACTTCGACAAGCGCGAAGGCGCC
TCCCTGGACCTGGTCACCGTTAACGAGAACGCCGCCGACGCTCCCCTCGA
GCTGGCCGACTCCGCCAACAAGCAGGATGCCATCAACACCCCCAGCGCCC
TGGCCATGGAAGCAACCTTCATCAACCACAACTTCGCCCTGCAGACCGTT
GTCGAGTCCGAGGACAGCAAGGTCTCCCTGGCCCACCCTAACCCCTTCTA
CAACGCCGCCGAGGAGACCGAGCCCCTCGCCTCCAAGGCCTACAAGTACC
GTCGCTTCGATCTCTCCCTGGAGCGCGACGACGAGCCCGTCAACATGATC
GTTCGTACCGAAGTCGACGCCATCATGAAGAACCCCGTCAACGGCGAGGA
CCAGCAGCTGCTCGTCAAGGCCCTCAACGAGTTCGACAGCAAGGCCCAGG
GCTCCGGCGGTGCCCTCGACTGGCGCAGCAAGCTCTGGTCCCAGCGCGGT
GCCGTTGTTGCTACTGAGATGAAGAACAACAGCGTCAAGCTCGCCCGCTG
GACCACCCAGGCCATCCTCGCCAAGGCTGACGGCATGAAGCTGGGTTTCG
TCTCTCGTGCTAACCCCCGCTCGGCCGCTGGTCACGTCGTCCTCGGTGTT
GTCGGCTACAAGCCCCGTGATCTGGCTGCCCAGATGAACCTGAACCTCGG
CAACGGTTGGGGTATCGTGCGTACTATCGTCGACCGCATCCGTGCCCTCG
ATGCCGATGAGGATGAGGACAAGGTCACCAAGTACGTCCTTATCAAGGAC
CCCAACCGTCCTGTGCTGCGTCTGTACAGCGTCCCTGCTACTACCTTTGA
GGAGGAAGAGGAGGTCGCTGCTGAGGAGCAGGAGGCTGCTGAGGAGGAGG
CTGAGGAGTAAATGGCTCCCATCTCTATCGCAGACATCGTCGCCGCTCTG
CCGGCCGAAGACACCTGGGGCCCCGCTACCGCCAGCGACAACATGCTGCA
GGGCGTCCCCTACGCTCCCTTCTCCAAGGGTGACAAGCTGGGTCGTATGG
CTGACTGGACTGCCGAGTCCAAGGACCCTAACCGTGCCGGTCGCCAGGCC
TACAACCGCAACTACAGAGACCAGCAAGTCTACGGTGCCGGTTCCTCCAG
CCTCTTCGCCGTCCAGGTCGCCGAAGACGAATCTTCCTTCTCCGTTGTCG
ACAACACCCGCAGCTCCGCTAAGCGTACCTTCGGCCGTGGCGGTGGTACC
GTCTTCCGTGGCCGCGCCCAGCGCGGTGGTGCCCAGCGCGGTGGTCGTGC
CGGCTTCCAGCGCGTGGGCGCTGGCCGTGGCCAGGGTGGTGACCGCTACT
ACGACAACCGTTCTGGTGGCCGCGGCAACCGTGGCCGTCGCTTCGGCTGG
AAGGACTACGACAAGCCCCAGCGCACCCGTGAGCCTTCGGTCAACGTCCG
CCCCGACTGGAACATGCTGGAGGAGGTTGACTTCAGCCGTCTGTCCAAGC
TGAACCTCGAGGCCCCCGAGGGTGAGGACGTCGACTCGTATGGTTTCCTC
TACCACTACGACCGGTCCTACGACAAGGCGCCCGTCAAGAACGCCGAGCG
CCGTCTCCAGTCCCTCGACCGTGCCGCCTACAACGTCACCACCACCCAGG
ACCCCGTCATCCAGGAACTGGCCGAGAAGAACGAGGCCACCATCTTCGCC
ACCTCGGACATCCTGTCCATGCTCATGTGCGCCCCCCGCAGTGTCTACTC
CTGGGATATCGTCATCGTCCACCAGGGCAACAAGATCTACTTCGACAAGC
GCGAAGGCGCCTCCCTGGACCTGGTCACCGTTAACGAGAACGCCGCCGAC
GCTCCCCTCGAGCTGGCCGACTCCGCCAACAAGCAGGATGCCATCAACAC
CCCCAGCGCCCTGGCCATGGAAGCAACCTTCATCAACCACAACTTCGCCC
TGCAGACCGTTGTCGAGTCCGAGGACAGCAAGGTCTCCCTGGCCCACCCT
AACCCCTTCTACAACGCCGCCGAGGAGACCGAGCCCCTCGCCTCCAAGGC
CTACAAGTACCGTCGCTTCGATCTCTCCCTGGAGCGCGACGACGAGCCCG
TCAACATGATCGTTCGTACCGAAGTCGACGCCATCATGAAGAACCCCGTC
AACGGCGAGGACCAGCAGCTGCTCGTCAAGGCCCTCAACGAGTTCGACAG
CAAGGCCCAGGGCTCCGGCGGTGCCCTCGACTGGCGCAGCAAGCTCTGGT
CCCAGCGCGGTGCCGTTGTTGCTACTGAGATGAAGAACAACAGCGTCAAG
CTCGCCCGCTGGACCACCCAGGCCATCCTCGCCAAGGCTGACGGCATGAA
GCTGGGTTTCGTCTCTCGTGCTAACCCCCGCTCGGCCGCTGGTCACGTCG
TCCTCGGTGTTGTCGGCTACAAGCCCCGTGATCTGGCTGCCCAGATGAAC
CTGAACCTCGGCAACGGTTGGGGTATCGTGCGTACTATCGTCGACCGCAT
CCGTGCCCTCGATGCCGATGAGGATGAGGACAAGGTCACCAAGTACGTCC
TTATCAAGGACCCCAACCGTCCTGTGCTGCGTCTGTACAGCGTCCCTGCT
ACTACCTTTGAGGAGGAAGAGGAGGTCGCTGCTGAGGAGCAGGAGGCTGC
TGAGGAGGAGGCTGAGGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005852eukaryotic translation initiation factor 3 complex
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_29890ATCC64974_29890Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_29890-T1.exon1ATCC64974_29890-T1.exon1Aspergillus niger N402exon
ATCC64974_29890-T1.exon2ATCC64974_29890-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_29890-T1.cdsATCC64974_29890-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_29890-T1ATCC64974_29890-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR007783
DBxrefPFAM:PF05091
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:1007069..1008894 +
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