You are here

ATCC64974_29940-T1, ATCC64974_29940-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_29940-T1
Unique NameATCC64974_29940-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:1016742..1017821+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_29940-T1 ID=ATCC64974_29940-T1|Name=ATCC64974_29940-T1|organism=Aspergillus niger N402|type=mRNA|length=1080bp|location=Sequence derived from alignment at OGUI01000004.1:1016742..1017821+ (Aspergillus niger N402)
ATGCAACTCCCAACGGCGCTCACCCTCGCCCCAATCCTACATGCAATATG CATCACGGCGCAAAACCTCTCCCTGGGCGCCGACAACTTCTACCGAAGTA ACCTGGTAACCCTCCAACCGGTGACCTTCCCAACCCAATACCAAACCCTC ATTGCGGGCAACCTCTTCGTCCCCAACAACCTCACCGCGACCCCTGCGCC CGCCATCATTGTCGGCCACCCCATGGGCGCCGTGAAAGAGCAAAGCGCGA ACCTGTACGCCACCAAAATGGCCGAACAAGGCTACATCACCCTCTCCATC GACCTCCCCTTCTGGGGCGGCAGCACCGGCACCCCGCGCAACGCCGTCTC GCCCGACCTATACACCGAAGCCTTCAGCGCCGCCGTCGACTTCCTGGGCA GCAACACCACCAGCATCACCAGCATCCCCTCCATCACGCACCCCATCACG ATCAACCGCGACCGGATCGGGGTCATCGGCGTCTGCGCCAGCGGAGGCTT CGCCCTCAGCGCCGCCAAGATCGACCCACGCATCAAAGCCATCGTCACGG CCAGCATGTACGACATGGGTACCGTCAACCGACAGGGCCTGCAGCACTCG CAGAACCTCACGCAGAGACAGGCCGTGATTGCGTCCGCCGCGCTGCAGCG CTGGCCCGAGTACGAGCAGCCTGGCGGCTCCGAGACTCCGATCTCATACA CCGGCGGCACGCCGAATGTCCTCACCCCCAACGCCAGTGCCGTGGATCGC GAATTCTATGATTTCTACCGCACGGTGCGTGGCGAGGTGACGCCGCCCGG GTCGACCCCGGAATTGACGACTCATCCGACATTGACGAGTAACTTGAAGT TCATGAACTTTTATCCGTTCGAGGATTTGGATGTGATTGCCCCGAGACCG GTGCTGTTTATCTCCGGGGATCGCGCGCATTCGAGGGAGTTTAGTGAGAA TGCGTATCGGGGGGCGAGCGAGCCCAAGGAGTTGCTGTGGGTGAGGGGGG CGGGACATGTGGATTTGTATGATCGCGTGGAGGTGATCCCGTGGGAGAGG ATTGTGGGGTTCTTTGGGAGGAATTTGTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000004.1:1016742..1017821+

>ATCC64974_29940-T1 ID=ATCC64974_29940-T1|Name=ATCC64974_29940-T1|organism=Aspergillus niger N402|type=CDS|length=1080bp|location=Sequence derived from alignment at OGUI01000004.1:1016742..1017821+ (Aspergillus niger N402)
ATGCAACTCCCAACGGCGCTCACCCTCGCCCCAATCCTACATGCAATATG
CATCACGGCGCAAAACCTCTCCCTGGGCGCCGACAACTTCTACCGAAGTA
ACCTGGTAACCCTCCAACCGGTGACCTTCCCAACCCAATACCAAACCCTC
ATTGCGGGCAACCTCTTCGTCCCCAACAACCTCACCGCGACCCCTGCGCC
CGCCATCATTGTCGGCCACCCCATGGGCGCCGTGAAAGAGCAAAGCGCGA
ACCTGTACGCCACCAAAATGGCCGAACAAGGCTACATCACCCTCTCCATC
GACCTCCCCTTCTGGGGCGGCAGCACCGGCACCCCGCGCAACGCCGTCTC
GCCCGACCTATACACCGAAGCCTTCAGCGCCGCCGTCGACTTCCTGGGCA
GCAACACCACCAGCATCACCAGCATCCCCTCCATCACGCACCCCATCACG
ATCAACCGCGACCGGATCGGGGTCATCGGCGTCTGCGCCAGCGGAGGCTT
CGCCCTCAGCGCCGCCAAGATCGACCCACGCATCAAAGCCATCGTCACGG
CCAGCATGTACGACATGGGTACCGTCAACCGACAGGGCCTGCAGCACTCG
CAGAACCTCACGCAGAGACAGGCCGTGATTGCGTCCGCCGCGCTGCAGCG
CTGGCCCGAGTACGAGCAGCCTGGCGGCTCCGAGACTCCGATCTCATACA
CCGGCGGCACGCCGAATGTCCTCACCCCCAACGCCAGTGCCGTGGATCGC
GAATTCTATGATTTCTACCGCACGGTGCGTGGCGAGGTGACGCCGCCCGG
GTCGACCCCGGAATTGACGACTCATCCGACATTGACGAGTAACTTGAAGT
TCATGAACTTTTATCCGTTCGAGGATTTGGATGTGATTGCCCCGAGACCG
GTGCTGTTTATCTCCGGGGATCGCGCGCATTCGAGGGAGTTTAGTGAGAA
TGCGTATCGGGGGGCGAGCGAGCCCAAGGAGTTGCTGTGGGTGAGGGGGG
CGGGACATGTGGATTTGTATGATCGCGTGGAGGTGATCCCGTGGGAGAGG
ATTGTGGGGTTCTTTGGGAGGAATTTGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_29940ATCC64974_29940Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_29940-T1.exon1ATCC64974_29940-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_29940-T1.cdsATCC64974_29940-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_29940-T1ATCC64974_29940-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-15)
DBxrefInterPro:IPR002925
DBxrefInterPro:IPR029058
DBxrefPFAM:PF02129
DBxrefPFAM:PF01738
DBxrefPFAM:PF12697
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:1016742..1017821 +