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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000001.1:929594..931634- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_3020-T1 ID=ATCC64974_3020-T1|Name=ATCC64974_3020-T1|organism=Aspergillus niger N402|type=mRNA|length=2041bp|location=Sequence derived from alignment at OGUI01000001.1:929594..931634- (Aspergillus niger N402)
ATGGAGAGGAGAGGTCCAACTCCAGGCTCTGGCTCATATGGTAAAGCTTG
CAGACAATGCTCCAAGGCCAAGTGTCGGTGCGTAGCTCGACCCGACGGTA
CCGGCTGCGAAAGGTAAGCGTCTAAGTATGAGTATTGACTTGATTCTAAT
CACCACTCAGATGTCTGCGTCTCAAGAAACAATGCCAGCCATCAGAACCA
ACTCGTAGGAAACCTCATCGGAATCCCGAGTCGGGTACGCAGATAGCGAA
GCTTGAGGGGAGGATTGATAGCCTCACGGCAATGCTTCGATCTGTCGCAC
ATGCCGCTGGAGTATCTAGCAATCTGCAAACTAGTTCGAATGCTAGTACA
AATGAAGATCTCAGCAACTTAGCTATCCCTGACACTAATCATGACAGCGT
ACTGGTGCCACCATCATTCACTACTGCACCGTCTCAATCGACTACGACTC
CGTCTCCTTGCAATGGCTCGAGCCAGCCATTAGCACCACAGCCACCCCTA
TATGAGTTGAACCTAGACGAGGCATCCTGGTATCTCGAACGCTTCACGAC
GAACATGCTGCCATGCTTCCCTTTCATCTGTCTGCCACCAAACACAACTA
CGCAGCAGTTGCAAGAAGACCGGCCATTTCTCCTCGAGGCCATCATTGCG
GTAGCTACGCCCTCAACCCAGGTGAAACTAGCACGCACAGATAGATTGAA
ATCTCGCTTAACTAAGTCAGCTATGCTTGAGAACCAGTCCAGCATTGATA
TGCTGCTAAGCATCCTGACTTACATTGCATGGAGTACGGATCCTTTCGTC
AAACGCGCAAGTAATTTGTCTCGCATGATAATGCTCGCTATTTCTATGGT
CTATGATCTCCAACTGGACAAGCAGCCACCACCCGAGGTGCCCATAATAG
CGAAGATGGCACCCGGGCTGGAAAATCCGGAGCAGAATGCAAGTAATAAT
TCCCTGCAAGGGATTTTGGAGCAGCATCGAGCGGCATTGGCTTGCTTTGT
TCTCAGCTCGATGTAGGCATAGCCCTATCCTTATATTGTCACTGGAGCGT
GTCTTTCCACTGACATGACTGCACCCCAGCATCTCATCCACCGTTGGCCG
CATAGCTTCACTCCGGTGGAACATCCAAATGGAACATGCCCTAAATATAA
TCGAGACGAATAAAGAAAGCCCATCAGACGAGTATCTCACAGCCCAGATC
CGTTTACAGATCCTCGCCCAAAAGGCCTTATCCCTCCGTGACCCAGACGA
GCCATCCCCCTCCACAACACCTCCAGCCACAACCATGTATCTCAAGGTAC
TCCAAAGACAACTAACTGAACTCCAATCCTCAATCCCACCACATCTCCCC
CATTACGGTGAGTAATTACTTTAATTATCCCTAGTCACCCATACTAAATA
AACTCCCAGAACTCCTCCACCTCCAAACCCACTACATCTCCCTCCTCCTC
CACGAAACCCCCCGCCCCGCCAGCTCCAGCACCCCTCTACTCCCCAGCAC
CCCAGACTCCCTAACCTCCCTCTGGAACTCAGTCCAAGCCATTAAATCCT
GGCTCTCGACGTTCCAAACCCTCCCCGCATCAACCATCACCGGATTCCCT
TTCTTCATGTGGTTCCAACTCGTCCGATGCATCGTACTCCTGAAACATCT
CTCCACGTTCGAGGACCCAGCATGGGACCGCGATGCCGTGCGGCAGGAGG
TGGATATGCTGGCGTTGCTGGAGTGGATGGGGGAGAAGGCTGAGATGGCT
AGTTTGGAGGCTGGGGAGGGGTCGGATGATGATTTGTTTCGGAGAGTGGG
GAGGATGTTGAGGTTGGCGAGGGAGTGGGTGGTTAAGAAGATGAGGGGGG
AGGTGGGTGGGGATGGATTGGTGTCTGAGGAGAATAGTGAGGGTAGTAAT
GAAGGTAGTAGTGGTACAATGGGTATAGATATGGATATGGATATGACTGA
TATGGCGTGGATGCATGCGCTGGAATCTGGGGATGGAGGTTGGCTTGAGG
AGGTGCTGGGGTGGTCGCCGCTTGCTGTTCATAATATCTAG back to topCoding sequence (CDS) from alignment at OGUI01000001.1:929594..931634- >ATCC64974_3020-T1 ID=ATCC64974_3020-T1|Name=ATCC64974_3020-T1|organism=Aspergillus niger N402|type=CDS|length=7500bp|location=Sequence derived from alignment at OGUI01000001.1:929594..931634- (Aspergillus niger N402)
AACTCCTCCACCTCCAAACCCACTACATCTCCCTCCTCCTCCACGAAACC
CCCCGCCCCGCCAGCTCCAGCACCCCTCTACTCCCCAGCACCCCAGACTC
CCTAACCTCCCTCTGGAACTCAGTCCAAGCCATTAAATCCTGGCTCTCGA
CGTTCCAAACCCTCCCCGCATCAACCATCACCGGATTCCCTTTCTTCATG
TGGTTCCAACTCGTCCGATGCATCGTACTCCTGAAACATCTCTCCACGTT
CGAGGACCCAGCATGGGACCGCGATGCCGTGCGGCAGGAGGTGGATATGC
TGGCGTTGCTGGAGTGGATGGGGGAGAAGGCTGAGATGGCTAGTTTGGAG
GCTGGGGAGGGGTCGGATGATGATTTGTTTCGGAGAGTGGGGAGGATGTT
GAGGTTGGCGAGGGAGTGGGTGGTTAAGAAGATGAGGGGGGAGGTGGGTG
GGGATGGATTGGTGTCTGAGGAGAATAGTGAGGGTAGTAATGAAGGTAGT
AGTGGTACAATGGGTATAGATATGGATATGGATATGACTGATATGGCGTG
GATGCATGCGCTGGAATCTGGGGATGGAGGTTGGCTTGAGGAGGTGCTGG
GGTGGTCGCCGCTTGCTGTTCATAATATCTAGCATCTCATCCACCGTTGG
CCGCATAGCTTCACTCCGGTGGAACATCCAAATGGAACATGCCCTAAATA
TAATCGAGACGAATAAAGAAAGCCCATCAGACGAGTATCTCACAGCCCAG
ATCCGTTTACAGATCCTCGCCCAAAAGGCCTTATCCCTCCGTGACCCAGA
CGAGCCATCCCCCTCCACAACACCTCCAGCCACAACCATGTATCTCAAGG
TACTCCAAAGACAACTAACTGAACTCCAATCCTCAATCCCACCACATCTC
CCCCATTACGATGTCTGCGTCTCAAGAAACAATGCCAGCCATCAGAACCA
ACTCGTAGGAAACCTCATCGGAATCCCGAGTCGGGTACGCAGATAGCGAA
GCTTGAGGGGAGGATTGATAGCCTCACGGCAATGCTTCGATCTGTCGCAC
ATGCCGCTGGAGTATCTAGCAATCTGCAAACTAGTTCGAATGCTAGTACA
AATGAAGATCTCAGCAACTTAGCTATCCCTGACACTAATCATGACAGCGT
ACTGGTGCCACCATCATTCACTACTGCACCGTCTCAATCGACTACGACTC
CGTCTCCTTGCAATGGCTCGAGCCAGCCATTAGCACCACAGCCACCCCTA
TATGAGTTGAACCTAGACGAGGCATCCTGGTATCTCGAACGCTTCACGAC
GAACATGCTGCCATGCTTCCCTTTCATCTGTCTGCCACCAAACACAACTA
CGCAGCAGTTGCAAGAAGACCGGCCATTTCTCCTCGAGGCCATCATTGCG
GTAGCTACGCCCTCAACCCAGGTGAAACTAGCACGCACAGATAGATTGAA
ATCTCGCTTAACTAAGTCAGCTATGCTTGAGAACCAGTCCAGCATTGATA
TGCTGCTAAGCATCCTGACTTACATTGCATGGAGTACGGATCCTTTCGTC
AAACGCGCAAGTAATTTGTCTCGCATGATAATGCTCGCTATTTCTATGGT
CTATGATCTCCAACTGGACAAGCAGCCACCACCCGAGGTGCCCATAATAG
CGAAGATGGCACCCGGGCTGGAAAATCCGGAGCAGAATGCAAGTAATAAT
TCCCTGCAAGGGATTTTGGAGCAGCATCGAGCGGCATTGGCTTGCTTTGT
TCTCAGCTCGATATGGAGAGGAGAGGTCCAACTCCAGGCTCTGGCTCATA
TGGTAAAGCTTGCAGACAATGCTCCAAGGCCAAGTGTCGGTGCGTAGCTC
GACCCGACGGTACCGGCTGCGAAAGAACTCCTCCACCTCCAAACCCACTA
CATCTCCCTCCTCCTCCACGAAACCCCCCGCCCCGCCAGCTCCAGCACCC
CTCTACTCCCCAGCACCCCAGACTCCCTAACCTCCCTCTGGAACTCAGTC
CAAGCCATTAAATCCTGGCTCTCGACGTTCCAAACCCTCCCCGCATCAAC
CATCACCGGATTCCCTTTCTTCATGTGGTTCCAACTCGTCCGATGCATCG
TACTCCTGAAACATCTCTCCACGTTCGAGGACCCAGCATGGGACCGCGAT
GCCGTGCGGCAGGAGGTGGATATGCTGGCGTTGCTGGAGTGGATGGGGGA
GAAGGCTGAGATGGCTAGTTTGGAGGCTGGGGAGGGGTCGGATGATGATT
TGTTTCGGAGAGTGGGGAGGATGTTGAGGTTGGCGAGGGAGTGGGTGGTT
AAGAAGATGAGGGGGGAGGTGGGTGGGGATGGATTGGTGTCTGAGGAGAA
TAGTGAGGGTAGTAATGAAGGTAGTAGTGGTACAATGGGTATAGATATGG
ATATGGATATGACTGATATGGCGTGGATGCATGCGCTGGAATCTGGGGAT
GGAGGTTGGCTTGAGGAGGTGCTGGGGTGGTCGCCGCTTGCTGTTCATAA
TATCTAGCATCTCATCCACCGTTGGCCGCATAGCTTCACTCCGGTGGAAC
ATCCAAATGGAACATGCCCTAAATATAATCGAGACGAATAAAGAAAGCCC
ATCAGACGAGTATCTCACAGCCCAGATCCGTTTACAGATCCTCGCCCAAA
AGGCCTTATCCCTCCGTGACCCAGACGAGCCATCCCCCTCCACAACACCT
CCAGCCACAACCATGTATCTCAAGGTACTCCAAAGACAACTAACTGAACT
CCAATCCTCAATCCCACCACATCTCCCCCATTACGATGTCTGCGTCTCAA
GAAACAATGCCAGCCATCAGAACCAACTCGTAGGAAACCTCATCGGAATC
CCGAGTCGGGTACGCAGATAGCGAAGCTTGAGGGGAGGATTGATAGCCTC
ACGGCAATGCTTCGATCTGTCGCACATGCCGCTGGAGTATCTAGCAATCT
GCAAACTAGTTCGAATGCTAGTACAAATGAAGATCTCAGCAACTTAGCTA
TCCCTGACACTAATCATGACAGCGTACTGGTGCCACCATCATTCACTACT
GCACCGTCTCAATCGACTACGACTCCGTCTCCTTGCAATGGCTCGAGCCA
GCCATTAGCACCACAGCCACCCCTATATGAGTTGAACCTAGACGAGGCAT
CCTGGTATCTCGAACGCTTCACGACGAACATGCTGCCATGCTTCCCTTTC
ATCTGTCTGCCACCAAACACAACTACGCAGCAGTTGCAAGAAGACCGGCC
ATTTCTCCTCGAGGCCATCATTGCGGTAGCTACGCCCTCAACCCAGGTGA
AACTAGCACGCACAGATAGATTGAAATCTCGCTTAACTAAGTCAGCTATG
CTTGAGAACCAGTCCAGCATTGATATGCTGCTAAGCATCCTGACTTACAT
TGCATGGAGTACGGATCCTTTCGTCAAACGCGCAAGTAATTTGTCTCGCA
TGATAATGCTCGCTATTTCTATGGTCTATGATCTCCAACTGGACAAGCAG
CCACCACCCGAGGTGCCCATAATAGCGAAGATGGCACCCGGGCTGGAAAA
TCCGGAGCAGAATGCAAGTAATAATTCCCTGCAAGGGATTTTGGAGCAGC
ATCGAGCGGCATTGGCTTGCTTTGTTCTCAGCTCGATATGGAGAGGAGAG
GTCCAACTCCAGGCTCTGGCTCATATGGTAAAGCTTGCAGACAATGCTCC
AAGGCCAAGTGTCGGTGCGTAGCTCGACCCGACGGTACCGGCTGCGAAAG
AACTCCTCCACCTCCAAACCCACTACATCTCCCTCCTCCTCCACGAAACC
CCCCGCCCCGCCAGCTCCAGCACCCCTCTACTCCCCAGCACCCCAGACTC
CCTAACCTCCCTCTGGAACTCAGTCCAAGCCATTAAATCCTGGCTCTCGA
CGTTCCAAACCCTCCCCGCATCAACCATCACCGGATTCCCTTTCTTCATG
TGGTTCCAACTCGTCCGATGCATCGTACTCCTGAAACATCTCTCCACGTT
CGAGGACCCAGCATGGGACCGCGATGCCGTGCGGCAGGAGGTGGATATGC
TGGCGTTGCTGGAGTGGATGGGGGAGAAGGCTGAGATGGCTAGTTTGGAG
GCTGGGGAGGGGTCGGATGATGATTTGTTTCGGAGAGTGGGGAGGATGTT
GAGGTTGGCGAGGGAGTGGGTGGTTAAGAAGATGAGGGGGGAGGTGGGTG
GGGATGGATTGGTGTCTGAGGAGAATAGTGAGGGTAGTAATGAAGGTAGT
AGTGGTACAATGGGTATAGATATGGATATGGATATGACTGATATGGCGTG
GATGCATGCGCTGGAATCTGGGGATGGAGGTTGGCTTGAGGAGGTGCTGG
GGTGGTCGCCGCTTGCTGTTCATAATATCTAGCATCTCATCCACCGTTGG
CCGCATAGCTTCACTCCGGTGGAACATCCAAATGGAACATGCCCTAAATA
TAATCGAGACGAATAAAGAAAGCCCATCAGACGAGTATCTCACAGCCCAG
ATCCGTTTACAGATCCTCGCCCAAAAGGCCTTATCCCTCCGTGACCCAGA
CGAGCCATCCCCCTCCACAACACCTCCAGCCACAACCATGTATCTCAAGG
TACTCCAAAGACAACTAACTGAACTCCAATCCTCAATCCCACCACATCTC
CCCCATTACGATGTCTGCGTCTCAAGAAACAATGCCAGCCATCAGAACCA
ACTCGTAGGAAACCTCATCGGAATCCCGAGTCGGGTACGCAGATAGCGAA
GCTTGAGGGGAGGATTGATAGCCTCACGGCAATGCTTCGATCTGTCGCAC
ATGCCGCTGGAGTATCTAGCAATCTGCAAACTAGTTCGAATGCTAGTACA
AATGAAGATCTCAGCAACTTAGCTATCCCTGACACTAATCATGACAGCGT
ACTGGTGCCACCATCATTCACTACTGCACCGTCTCAATCGACTACGACTC
CGTCTCCTTGCAATGGCTCGAGCCAGCCATTAGCACCACAGCCACCCCTA
TATGAGTTGAACCTAGACGAGGCATCCTGGTATCTCGAACGCTTCACGAC
GAACATGCTGCCATGCTTCCCTTTCATCTGTCTGCCACCAAACACAACTA
CGCAGCAGTTGCAAGAAGACCGGCCATTTCTCCTCGAGGCCATCATTGCG
GTAGCTACGCCCTCAACCCAGGTGAAACTAGCACGCACAGATAGATTGAA
ATCTCGCTTAACTAAGTCAGCTATGCTTGAGAACCAGTCCAGCATTGATA
TGCTGCTAAGCATCCTGACTTACATTGCATGGAGTACGGATCCTTTCGTC
AAACGCGCAAGTAATTTGTCTCGCATGATAATGCTCGCTATTTCTATGGT
CTATGATCTCCAACTGGACAAGCAGCCACCACCCGAGGTGCCCATAATAG
CGAAGATGGCACCCGGGCTGGAAAATCCGGAGCAGAATGCAAGTAATAAT
TCCCTGCAAGGGATTTTGGAGCAGCATCGAGCGGCATTGGCTTGCTTTGT
TCTCAGCTCGATATGGAGAGGAGAGGTCCAACTCCAGGCTCTGGCTCATA
TGGTAAAGCTTGCAGACAATGCTCCAAGGCCAAGTGTCGGTGCGTAGCTC
GACCCGACGGTACCGGCTGCGAAAGAACTCCTCCACCTCCAAACCCACTA
CATCTCCCTCCTCCTCCACGAAACCCCCCGCCCCGCCAGCTCCAGCACCC
CTCTACTCCCCAGCACCCCAGACTCCCTAACCTCCCTCTGGAACTCAGTC
CAAGCCATTAAATCCTGGCTCTCGACGTTCCAAACCCTCCCCGCATCAAC
CATCACCGGATTCCCTTTCTTCATGTGGTTCCAACTCGTCCGATGCATCG
TACTCCTGAAACATCTCTCCACGTTCGAGGACCCAGCATGGGACCGCGAT
GCCGTGCGGCAGGAGGTGGATATGCTGGCGTTGCTGGAGTGGATGGGGGA
GAAGGCTGAGATGGCTAGTTTGGAGGCTGGGGAGGGGTCGGATGATGATT
TGTTTCGGAGAGTGGGGAGGATGTTGAGGTTGGCGAGGGAGTGGGTGGTT
AAGAAGATGAGGGGGGAGGTGGGTGGGGATGGATTGGTGTCTGAGGAGAA
TAGTGAGGGTAGTAATGAAGGTAGTAGTGGTACAATGGGTATAGATATGG
ATATGGATATGACTGATATGGCGTGGATGCATGCGCTGGAATCTGGGGAT
GGAGGTTGGCTTGAGGAGGTGCTGGGGTGGTCGCCGCTTGCTGTTCATAA
TATCTAGCATCTCATCCACCGTTGGCCGCATAGCTTCACTCCGGTGGAAC
ATCCAAATGGAACATGCCCTAAATATAATCGAGACGAATAAAGAAAGCCC
ATCAGACGAGTATCTCACAGCCCAGATCCGTTTACAGATCCTCGCCCAAA
AGGCCTTATCCCTCCGTGACCCAGACGAGCCATCCCCCTCCACAACACCT
CCAGCCACAACCATGTATCTCAAGGTACTCCAAAGACAACTAACTGAACT
CCAATCCTCAATCCCACCACATCTCCCCCATTACGATGTCTGCGTCTCAA
GAAACAATGCCAGCCATCAGAACCAACTCGTAGGAAACCTCATCGGAATC
CCGAGTCGGGTACGCAGATAGCGAAGCTTGAGGGGAGGATTGATAGCCTC
ACGGCAATGCTTCGATCTGTCGCACATGCCGCTGGAGTATCTAGCAATCT
GCAAACTAGTTCGAATGCTAGTACAAATGAAGATCTCAGCAACTTAGCTA
TCCCTGACACTAATCATGACAGCGTACTGGTGCCACCATCATTCACTACT
GCACCGTCTCAATCGACTACGACTCCGTCTCCTTGCAATGGCTCGAGCCA
GCCATTAGCACCACAGCCACCCCTATATGAGTTGAACCTAGACGAGGCAT
CCTGGTATCTCGAACGCTTCACGACGAACATGCTGCCATGCTTCCCTTTC
ATCTGTCTGCCACCAAACACAACTACGCAGCAGTTGCAAGAAGACCGGCC
ATTTCTCCTCGAGGCCATCATTGCGGTAGCTACGCCCTCAACCCAGGTGA
AACTAGCACGCACAGATAGATTGAAATCTCGCTTAACTAAGTCAGCTATG
CTTGAGAACCAGTCCAGCATTGATATGCTGCTAAGCATCCTGACTTACAT
TGCATGGAGTACGGATCCTTTCGTCAAACGCGCAAGTAATTTGTCTCGCA
TGATAATGCTCGCTATTTCTATGGTCTATGATCTCCAACTGGACAAGCAG
CCACCACCCGAGGTGCCCATAATAGCGAAGATGGCACCCGGGCTGGAAAA
TCCGGAGCAGAATGCAAGTAATAATTCCCTGCAAGGGATTTTGGAGCAGC
ATCGAGCGGCATTGGCTTGCTTTGTTCTCAGCTCGATATGGAGAGGAGAG
GTCCAACTCCAGGCTCTGGCTCATATGGTAAAGCTTGCAGACAATGCTCC
AAGGCCAAGTGTCGGTGCGTAGCTCGACCCGACGGTACCGGCTGCGAAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_3020-T1 | ATCC64974_3020-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR001138 |
| DBxref | InterPro:IPR036864 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000001.1 | supercontig | OGUI01000001.1:929594..931634 - |
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