You are here

Home

ATCC64974_30230-T1, ATCC64974_30230-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_30230-T1
Unique NameATCC64974_30230-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:1109724..1110616+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_30230-T1 ID=ATCC64974_30230-T1|Name=ATCC64974_30230-T1|organism=Aspergillus niger N402|type=mRNA|length=893bp|location=Sequence derived from alignment at OGUI01000004.1:1109724..1110616+ (Aspergillus niger N402)
ATGTCCTCCCTCGTTGAAGTCGCCTCTGAGGCCGAATTCCCTAACATCAT
CTCCTCCATCCCCCCGTCATGCCTACAGGTTCTCTACTTCCACGCCCCCT
GGGCTGCTCCTTGCGCCCAAATGCGCGCCGTCATCTCCGCCCTCGCCTCC
CAGTACCCCGCGACCAACCCTCCCTCCATCGCCTTCCTCAGCGTTAACGC
CGAGGAGCTCCCTGATATCTCGGAAGAGTACAATGTCACCGCTGTTCCCT
TCGTAGTCCTCGTCCGGGACAACAAGATTCTCGAAACCATTAGCGGCAGT
GAAGCAATCCAAGTGCGCGATGCCGTTGAGCGCCACGCCGGTGCCGCTGC
CGCCGCCTCTGCAGACGGTGCTCCCAAGACCGTCATCCCCCCACCATTGA
CAGCCGTGCCTCGAGAGAACGTTCCCGCCACCGCTACACAGGCGCCCGCC
ACGAACGGCAACGCAGCTGCCCCCGCATTGACCCCCGAACAGTCGAAGGA
GGCGCTATTTGCGCGTCTCGCGGAGTTGGTGAAGGCTGCGCCGGTGATGT
TGTTCATGAAGGGATCTCCCAGTGCGCCTCAGTGTGGATTCAGTCGGCAG
ATCGTGGGCATTCTGCGTGAGCGGAGCGTCAAGTACGGATTCTTCAACAT
CTTGGCCGATGAGGATGTGAGACAGGGCTTGAAGGAGTTTGCGGATTGGC
CTACCTTCCCGCAGTTGTGGGTTGAGGGTGAGTTAGTTGGTGGATTGGAT
ATCGTAAGGGCCCTCCTTCCGTCCCTTTACCTTTCATGGTTTGTCTGCAG
TACTAACGTGATGTTTCTAAATAGGTCAAGGAGGAACTTGAGAACGATCC
CGAATTCCTGGACCGCTTCTCCGTTAACAAGCCCGCTGCCTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000004.1:1109724..1110616+

>ATCC64974_30230-T1 ID=ATCC64974_30230-T1|Name=ATCC64974_30230-T1|organism=Aspergillus niger N402|type=CDS|length=1644bp|location=Sequence derived from alignment at OGUI01000004.1:1109724..1110616+ (Aspergillus niger N402)
ATGTCCTCCCTCGTTGAAGTCGCCTCTGAGGCCGAATTCCCTAACATCAT
CTCCTCCATCCCCCCGTCATGCCTACAGGTTCTCTACTTCCACGCCCCCT
GGGCTGCTCCTTGCGCCCAAATGCGCGCCGTCATCTCCGCCCTCGCCTCC
CAGTACCCCGCGACCAACCCTCCCTCCATCGCCTTCCTCAGCGTTAACGC
CGAGGAGCTCCCTGATATCTCGGAAGAGTACAATGTCACCGCTGTTCCCT
TCGTAGTCCTCGTCCGGGACAACAAGATTCTCGAAACCATTAGCGGCAGT
GAAGCAATCCAAGTGCGCGATGCCGTTGAGCGCCACGCCGGTGCCGCTGC
CGCCGCCTCTGCAGACGGTGCTCCCAAGACCGTCATCCCCCCACCATTGA
CAGCCGTGCCTCGAGAGAACGTTCCCGCCACCGCTACACAGGCGCCCGCC
ACGAACGGCAACGCAGCTGCCCCCGCATTGACCCCCGAACAGTCGAAGGA
GGCGCTATTTGCGCGTCTCGCGGAGTTGGTGAAGGCTGCGCCGGTGATGT
TGTTCATGAAGGGATCTCCCAGTGCGCCTCAGTGTGGATTCAGTCGGCAG
ATCGTGGGCATTCTGCGTGAGCGGAGCGTCAAGTACGGATTCTTCAACAT
CTTGGCCGATGAGGATGTGAGACAGGGCTTGAAGGAGTTTGCGGATTGGC
CTACCTTCCCGCAGTTGTGGGTTGAGGGTGAGTTAGTTGGTGGATTGGAT
ATCGTCAAGGAGGAACTTGAGAACGATCCCGAATTCCTGGACCGCTTCTC
CGTTAACAAGCCCGCTGCCTAGATGTCCTCCCTCGTTGAAGTCGCCTCTG
AGGCCGAATTCCCTAACATCATCTCCTCCATCCCCCCGTCATGCCTACAG
GTTCTCTACTTCCACGCCCCCTGGGCTGCTCCTTGCGCCCAAATGCGCGC
CGTCATCTCCGCCCTCGCCTCCCAGTACCCCGCGACCAACCCTCCCTCCA
TCGCCTTCCTCAGCGTTAACGCCGAGGAGCTCCCTGATATCTCGGAAGAG
TACAATGTCACCGCTGTTCCCTTCGTAGTCCTCGTCCGGGACAACAAGAT
TCTCGAAACCATTAGCGGCAGTGAAGCAATCCAAGTGCGCGATGCCGTTG
AGCGCCACGCCGGTGCCGCTGCCGCCGCCTCTGCAGACGGTGCTCCCAAG
ACCGTCATCCCCCCACCATTGACAGCCGTGCCTCGAGAGAACGTTCCCGC
CACCGCTACACAGGCGCCCGCCACGAACGGCAACGCAGCTGCCCCCGCAT
TGACCCCCGAACAGTCGAAGGAGGCGCTATTTGCGCGTCTCGCGGAGTTG
GTGAAGGCTGCGCCGGTGATGTTGTTCATGAAGGGATCTCCCAGTGCGCC
TCAGTGTGGATTCAGTCGGCAGATCGTGGGCATTCTGCGTGAGCGGAGCG
TCAAGTACGGATTCTTCAACATCTTGGCCGATGAGGATGTGAGACAGGGC
TTGAAGGAGTTTGCGGATTGGCCTACCTTCCCGCAGTTGTGGGTTGAGGG
TGAGTTAGTTGGTGGATTGGATATCGTCAAGGAGGAACTTGAGAACGATC
CCGAATTCCTGGACCGCTTCTCCGTTAACAAGCCCGCTGCCTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0009055electron transfer activity
GO:0015035protein disulfide oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_30230ATCC64974_30230Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_30230-T1.exon1ATCC64974_30230-T1.exon1Aspergillus niger N402exon
ATCC64974_30230-T1.exon2ATCC64974_30230-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_30230-T1.cdsATCC64974_30230-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_30230-T1ATCC64974_30230-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036249
DBxrefInterPro:IPR033658
DBxrefInterPro:IPR013766
DBxrefInterPro:IPR002109
DBxrefPFAM:PF00085
DBxrefPFAM:PF00462
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:1109724..1110616 +
Powered by Drupal