You are here

Home

ATCC64974_30540-T1, ATCC64974_30540-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_30540-T1
Unique NameATCC64974_30540-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:1226100..1227175+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_30540-T1 ID=ATCC64974_30540-T1|Name=ATCC64974_30540-T1|organism=Aspergillus niger N402|type=mRNA|length=1076bp|location=Sequence derived from alignment at OGUI01000004.1:1226100..1227175+ (Aspergillus niger N402)
ATGAGATGGGGCGCTCGCATAGCACTATGTGCTAGTCTAGCACTCATCTT
GCCCTTATATCTCTTGAAGATCCACCTCGAGGACCTTTGCGATCAGTATC
GCGCGGGCGCATATCTGATCAATTGGCTGGATTTGCGCCCGCCGATGAAC
ACATTAAATGGCTCTCGTCCTGTCACACCAGGGGATAAAGTGATTGTGAT
GGCCAGGCTACAGGAAGAGCACACTGAATGGGTCGAGCAGGAGCTACCAG
AGTGAGTTTTTTTTGTCCTCCCCTTCCCAACCCAATGTTTCGGCGCACTA
ATAGCTTCCCTCCACAGCTGGCAACGTGCCATATACATCGTGAATCCCTC
CAAAAAGGTCGCAGCTGACGGCACAACACTCACAACCCCGCTGAACAAGG
GTCACGAGTCCATGGCTTATCTCACCTACCTAATTGATCACTACGACACC
CTACCATCCACTATTGCTTTCCTTCATTCCCATCGCTCGGGTTTCCTGAT
GGCCTGGCATGTAGATGCGCCCTTACACGACAATGTCATTGCGATGAAAT
CCCTGCGTCTCAACTTCGTCCAAGACAATGGCTATGTCAACCTCCGCTGC
AACTGGAACCCGGGGTGCAAGCAGGGCCATCGCACCAACCAGCACGTGAC
GGAAGAAGTCTTTGCAGAGATATTTGAGGGCACCAGCACCCCGCCTTTGA
ACTCCACCGGGGGCCTTACGATGCAAGATGAATACGACGAAGCTAAATAC
CAGAAGTTCCTGCAAATGCCGAAACAGATTGGCGCGGCGTGCTGTGCGCA
ATTCGCCGTGTCCCGGGAGCAGGTCCACCAACGACCACGAGAGGACTACA
TCAAGATCCGCCAGTGGATAATCGATACCGACAAGGATGACGCCAGTAGT
GGCCGTGTCATGGAATTTCTCTGGCATGTCATATTCGGCAAAGAATCAAT
ATAGTATGTTGCCTTTGCACACCTCCCCCGTCTACCTGCTGAATGCGTCC
TAAATACTAACACTTCGCTACTCTCAGCTGTCCCGACGAAGAAGTCTGCT
ACTGTCAAGTTTATGGACAATGTTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000004.1:1226100..1227175+

>ATCC64974_30540-T1 ID=ATCC64974_30540-T1|Name=ATCC64974_30540-T1|organism=Aspergillus niger N402|type=CDS|length=2808bp|location=Sequence derived from alignment at OGUI01000004.1:1226100..1227175+ (Aspergillus niger N402)
ATGAGATGGGGCGCTCGCATAGCACTATGTGCTAGTCTAGCACTCATCTT
GCCCTTATATCTCTTGAAGATCCACCTCGAGGACCTTTGCGATCAGTATC
GCGCGGGCGCATATCTGATCAATTGGCTGGATTTGCGCCCGCCGATGAAC
ACATTAAATGGCTCTCGTCCTGTCACACCAGGGGATAAAGTGATTGTGAT
GGCCAGGCTACAGGAAGAGCACACTGAATGGGTCGAGCAGGAGCTACCAG
ACTGGCAACGTGCCATATACATCGTGAATCCCTCCAAAAAGGTCGCAGCT
GACGGCACAACACTCACAACCCCGCTGAACAAGGGTCACGAGTCCATGGC
TTATCTCACCTACCTAATTGATCACTACGACACCCTACCATCCACTATTG
CTTTCCTTCATTCCCATCGCTCGGGTTTCCTGATGGCCTGGCATGTAGAT
GCGCCCTTACACGACAATGTCATTGCGATGAAATCCCTGCGTCTCAACTT
CGTCCAAGACAATGGCTATGTCAACCTCCGCTGCAACTGGAACCCGGGGT
GCAAGCAGGGCCATCGCACCAACCAGCACGTGACGGAAGAAGTCTTTGCA
GAGATATTTGAGGGCACCAGCACCCCGCCTTTGAACTCCACCGGGGGCCT
TACGATGCAAGATGAATACGACGAAGCTAAATACCAGAAGTTCCTGCAAA
TGCCGAAACAGATTGGCGCGGCGTGCTGTGCGCAATTCGCCGTGTCCCGG
GAGCAGGTCCACCAACGACCACGAGAGGACTACATCAAGATCCGCCAGTG
GATAATCGATACCGACAAGGATGACGCCAGTAGTGGCCGTGTCATGGAAT
TTCTCTGGCATGTCATATTCGGCAAAGAATCAATATACTGTCCCGACGAA
GAAGTCTGCTACTGTCAAGTTTATGGACAATGTTGAATGAGATGGGGCGC
TCGCATAGCACTATGTGCTAGTCTAGCACTCATCTTGCCCTTATATCTCT
TGAAGATCCACCTCGAGGACCTTTGCGATCAGTATCGCGCGGGCGCATAT
CTGATCAATTGGCTGGATTTGCGCCCGCCGATGAACACATTAAATGGCTC
TCGTCCTGTCACACCAGGGGATAAAGTGATTGTGATGGCCAGGCTACAGG
AAGAGCACACTGAATGGGTCGAGCAGGAGCTACCAGACTGGCAACGTGCC
ATATACATCGTGAATCCCTCCAAAAAGGTCGCAGCTGACGGCACAACACT
CACAACCCCGCTGAACAAGGGTCACGAGTCCATGGCTTATCTCACCTACC
TAATTGATCACTACGACACCCTACCATCCACTATTGCTTTCCTTCATTCC
CATCGCTCGGGTTTCCTGATGGCCTGGCATGTAGATGCGCCCTTACACGA
CAATGTCATTGCGATGAAATCCCTGCGTCTCAACTTCGTCCAAGACAATG
GCTATGTCAACCTCCGCTGCAACTGGAACCCGGGGTGCAAGCAGGGCCAT
CGCACCAACCAGCACGTGACGGAAGAAGTCTTTGCAGAGATATTTGAGGG
CACCAGCACCCCGCCTTTGAACTCCACCGGGGGCCTTACGATGCAAGATG
AATACGACGAAGCTAAATACCAGAAGTTCCTGCAAATGCCGAAACAGATT
GGCGCGGCGTGCTGTGCGCAATTCGCCGTGTCCCGGGAGCAGGTCCACCA
ACGACCACGAGAGGACTACATCAAGATCCGCCAGTGGATAATCGATACCG
ACAAGGATGACGCCAGTAGTGGCCGTGTCATGGAATTTCTCTGGCATGTC
ATATTCGGCAAAGAATCAATATACTGTCCCGACGAAGAAGTCTGCTACTG
TCAAGTTTATGGACAATGTTGAATGAGATGGGGCGCTCGCATAGCACTAT
GTGCTAGTCTAGCACTCATCTTGCCCTTATATCTCTTGAAGATCCACCTC
GAGGACCTTTGCGATCAGTATCGCGCGGGCGCATATCTGATCAATTGGCT
GGATTTGCGCCCGCCGATGAACACATTAAATGGCTCTCGTCCTGTCACAC
CAGGGGATAAAGTGATTGTGATGGCCAGGCTACAGGAAGAGCACACTGAA
TGGGTCGAGCAGGAGCTACCAGACTGGCAACGTGCCATATACATCGTGAA
TCCCTCCAAAAAGGTCGCAGCTGACGGCACAACACTCACAACCCCGCTGA
ACAAGGGTCACGAGTCCATGGCTTATCTCACCTACCTAATTGATCACTAC
GACACCCTACCATCCACTATTGCTTTCCTTCATTCCCATCGCTCGGGTTT
CCTGATGGCCTGGCATGTAGATGCGCCCTTACACGACAATGTCATTGCGA
TGAAATCCCTGCGTCTCAACTTCGTCCAAGACAATGGCTATGTCAACCTC
CGCTGCAACTGGAACCCGGGGTGCAAGCAGGGCCATCGCACCAACCAGCA
CGTGACGGAAGAAGTCTTTGCAGAGATATTTGAGGGCACCAGCACCCCGC
CTTTGAACTCCACCGGGGGCCTTACGATGCAAGATGAATACGACGAAGCT
AAATACCAGAAGTTCCTGCAAATGCCGAAACAGATTGGCGCGGCGTGCTG
TGCGCAATTCGCCGTGTCCCGGGAGCAGGTCCACCAACGACCACGAGAGG
ACTACATCAAGATCCGCCAGTGGATAATCGATACCGACAAGGATGACGCC
AGTAGTGGCCGTGTCATGGAATTTCTCTGGCATGTCATATTCGGCAAAGA
ATCAATATACTGTCCCGACGAAGAAGTCTGCTACTGTCAAGTTTATGGAC
AATGTTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_30540ATCC64974_30540Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_30540-T1.exon1ATCC64974_30540-T1.exon1Aspergillus niger N402exon
ATCC64974_30540-T1.exon2ATCC64974_30540-T1.exon2Aspergillus niger N402exon
ATCC64974_30540-T1.exon3ATCC64974_30540-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_30540-T1.cdsATCC64974_30540-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_30540-T1ATCC64974_30540-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-26)
DBxrefInterPro:IPR021838
DBxrefPFAM:PF11913
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:1226100..1227175 +
Powered by Drupal