|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000004.1:1277571..1278800- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_30760-T1 ID=ATCC64974_30760-T1|Name=ATCC64974_30760-T1|organism=Aspergillus niger N402|type=mRNA|length=1230bp|location=Sequence derived from alignment at OGUI01000004.1:1277571..1278800- (Aspergillus niger N402)
ATGGCTCCTTTGCAGAAAGTGGTCGTGGTATACGGTGCCACTGGTGAGTC
AGGTTTGCAGCGTCGTTTGCCGTGTATACATATCTAACACACTATCCCAG
GTGTCCAGGGAAGGTCCATCGCCCTCTCTCTCCTCAAGAGCCAGCAGAAC
TTCGTCGTCCGGGCGCTTACTCGGAACCCTCAGTCGGAAAAGGCCAAAGA
ATTGGCTCGCCTAGGAGCTGAGGTGGTTAAGGCTGATGGATTCAACGACA
ACGACATGCAGAATGCCCTGTCCGGTGCCTGGGGATTCTGGCTTAACACC
CACCACCATGACCCAGTAAGTGGCCTTCTTGATTACGAGGGCACCAACTC
CTCATTCCATGAATCACACGCTGATCGCCAACATCCAGGCGGTAACGCAA
CCCGGTGGGCCGACTGACGAGGATCTCGGCAACCGCCTCATCGAGATTGC
AGCCAAGGCAGGCGTGAAGGTCTTCATTTACAGTACCTGCGAGTCTCCTG
CGATATTTACCAAAGGCGTTGCACCCGTTCCGGGCATGGATGGTATGTTC
ATCATGATTTCTTCGTGTCCGCGTCTAACTTTCCTCTTTATAGCCAAACA
CCGATGTGAGTTGTATGCCCGAACATTCAAGGAGTTTGACGCCGTCATTG
GCGCCTTCCCCGGGTGGTACTTCGAGAACTATGTCACTCCCGAGTACGCG
CAGGCCTTCGGTGGCTTCCCCATGTTCCCCGACAACGAGGGCTACCTGAC
CTGGCACGCTCCCTTGGTAGGTGGCGAAGGCAAGGTCCAAACGGTCTCCA
TTGAGGACGATTTTGGTGAGATGGTGCACGGAATGTTTCTGAACCCACTG
AAGTGGAAGAACAAGACCATTCAGTGCGTGAGTGATGCGTTCACGTATGA
GGATATGGTGAAGACCTTCACTGAGGGTAGGTTTCTAATTTAGCTTTCTC
TGGGAGTTGCTAACTGGGTGTCGCAGTTACGGGAAAGAAATCTCGCTACA
TTCCCATGGCCTCAGCGGATGACTTCCCAACCCATGGGAACTCTGTCCTC
GTTGAGTTGCAGGATGTCTTCAAGTACACCCAGAATAACAATGGCTGGTT
CTTCGGTAACCCCGACGACTTCGCAACCTGCCAGTCACTCAAGGACGAGG
CCCGCCGGGATAAGGGTCTTGAGCCGGAGCCGGTCATCTCCATGGCTAAG
TACTTTATCAAGCACTATGGACCCAACTAG back to topCoding sequence (CDS) from alignment at OGUI01000004.1:1277571..1278800- >ATCC64974_30760-T1 ID=ATCC64974_30760-T1|Name=ATCC64974_30760-T1|organism=Aspergillus niger N402|type=CDS|length=4995bp|location=Sequence derived from alignment at OGUI01000004.1:1277571..1278800- (Aspergillus niger N402)
TTACGGGAAAGAAATCTCGCTACATTCCCATGGCCTCAGCGGATGACTTC
CCAACCCATGGGAACTCTGTCCTCGTTGAGTTGCAGGATGTCTTCAAGTA
CACCCAGAATAACAATGGCTGGTTCTTCGGTAACCCCGACGACTTCGCAA
CCTGCCAGTCACTCAAGGACGAGGCCCGCCGGGATAAGGGTCTTGAGCCG
GAGCCGGTCATCTCCATGGCTAAGTACTTTATCAAGCACTATGGACCCAA
CTAGCCAAACACCGATGTGAGTTGTATGCCCGAACATTCAAGGAGTTTGA
CGCCGTCATTGGCGCCTTCCCCGGGTGGTACTTCGAGAACTATGTCACTC
CCGAGTACGCGCAGGCCTTCGGTGGCTTCCCCATGTTCCCCGACAACGAG
GGCTACCTGACCTGGCACGCTCCCTTGGTAGGTGGCGAAGGCAAGGTCCA
AACGGTCTCCATTGAGGACGATTTTGGTGAGATGGTGCACGGAATGTTTC
TGAACCCACTGAAGTGGAAGAACAAGACCATTCAGTGCGTGAGTGATGCG
TTCACGTATGAGGATATGGTGAAGACCTTCACTGAGGGCGGTAACGCAAC
CCGGTGGGCCGACTGACGAGGATCTCGGCAACCGCCTCATCGAGATTGCA
GCCAAGGCAGGCGTGAAGGTCTTCATTTACAGTACCTGCGAGTCTCCTGC
GATATTTACCAAAGGCGTTGCACCCGTTCCGGGCATGGATGGTGTCCAGG
GAAGGTCCATCGCCCTCTCTCTCCTCAAGAGCCAGCAGAACTTCGTCGTC
CGGGCGCTTACTCGGAACCCTCAGTCGGAAAAGGCCAAAGAATTGGCTCG
CCTAGGAGCTGAGGTGGTTAAGGCTGATGGATTCAACGACAACGACATGC
AGAATGCCCTGTCCGGTGCCTGGGGATTCTGGCTTAACACCCACCACCAT
GACCCAATGGCTCCTTTGCAGAAAGTGGTCGTGGTATACGGTGCCACTGT
TACGGGAAAGAAATCTCGCTACATTCCCATGGCCTCAGCGGATGACTTCC
CAACCCATGGGAACTCTGTCCTCGTTGAGTTGCAGGATGTCTTCAAGTAC
ACCCAGAATAACAATGGCTGGTTCTTCGGTAACCCCGACGACTTCGCAAC
CTGCCAGTCACTCAAGGACGAGGCCCGCCGGGATAAGGGTCTTGAGCCGG
AGCCGGTCATCTCCATGGCTAAGTACTTTATCAAGCACTATGGACCCAAC
TAGCCAAACACCGATGTGAGTTGTATGCCCGAACATTCAAGGAGTTTGAC
GCCGTCATTGGCGCCTTCCCCGGGTGGTACTTCGAGAACTATGTCACTCC
CGAGTACGCGCAGGCCTTCGGTGGCTTCCCCATGTTCCCCGACAACGAGG
GCTACCTGACCTGGCACGCTCCCTTGGTAGGTGGCGAAGGCAAGGTCCAA
ACGGTCTCCATTGAGGACGATTTTGGTGAGATGGTGCACGGAATGTTTCT
GAACCCACTGAAGTGGAAGAACAAGACCATTCAGTGCGTGAGTGATGCGT
TCACGTATGAGGATATGGTGAAGACCTTCACTGAGGGCGGTAACGCAACC
CGGTGGGCCGACTGACGAGGATCTCGGCAACCGCCTCATCGAGATTGCAG
CCAAGGCAGGCGTGAAGGTCTTCATTTACAGTACCTGCGAGTCTCCTGCG
ATATTTACCAAAGGCGTTGCACCCGTTCCGGGCATGGATGGTGTCCAGGG
AAGGTCCATCGCCCTCTCTCTCCTCAAGAGCCAGCAGAACTTCGTCGTCC
GGGCGCTTACTCGGAACCCTCAGTCGGAAAAGGCCAAAGAATTGGCTCGC
CTAGGAGCTGAGGTGGTTAAGGCTGATGGATTCAACGACAACGACATGCA
GAATGCCCTGTCCGGTGCCTGGGGATTCTGGCTTAACACCCACCACCATG
ACCCAATGGCTCCTTTGCAGAAAGTGGTCGTGGTATACGGTGCCACTGTT
ACGGGAAAGAAATCTCGCTACATTCCCATGGCCTCAGCGGATGACTTCCC
AACCCATGGGAACTCTGTCCTCGTTGAGTTGCAGGATGTCTTCAAGTACA
CCCAGAATAACAATGGCTGGTTCTTCGGTAACCCCGACGACTTCGCAACC
TGCCAGTCACTCAAGGACGAGGCCCGCCGGGATAAGGGTCTTGAGCCGGA
GCCGGTCATCTCCATGGCTAAGTACTTTATCAAGCACTATGGACCCAACT
AGCCAAACACCGATGTGAGTTGTATGCCCGAACATTCAAGGAGTTTGACG
CCGTCATTGGCGCCTTCCCCGGGTGGTACTTCGAGAACTATGTCACTCCC
GAGTACGCGCAGGCCTTCGGTGGCTTCCCCATGTTCCCCGACAACGAGGG
CTACCTGACCTGGCACGCTCCCTTGGTAGGTGGCGAAGGCAAGGTCCAAA
CGGTCTCCATTGAGGACGATTTTGGTGAGATGGTGCACGGAATGTTTCTG
AACCCACTGAAGTGGAAGAACAAGACCATTCAGTGCGTGAGTGATGCGTT
CACGTATGAGGATATGGTGAAGACCTTCACTGAGGGCGGTAACGCAACCC
GGTGGGCCGACTGACGAGGATCTCGGCAACCGCCTCATCGAGATTGCAGC
CAAGGCAGGCGTGAAGGTCTTCATTTACAGTACCTGCGAGTCTCCTGCGA
TATTTACCAAAGGCGTTGCACCCGTTCCGGGCATGGATGGTGTCCAGGGA
AGGTCCATCGCCCTCTCTCTCCTCAAGAGCCAGCAGAACTTCGTCGTCCG
GGCGCTTACTCGGAACCCTCAGTCGGAAAAGGCCAAAGAATTGGCTCGCC
TAGGAGCTGAGGTGGTTAAGGCTGATGGATTCAACGACAACGACATGCAG
AATGCCCTGTCCGGTGCCTGGGGATTCTGGCTTAACACCCACCACCATGA
CCCAATGGCTCCTTTGCAGAAAGTGGTCGTGGTATACGGTGCCACTGTTA
CGGGAAAGAAATCTCGCTACATTCCCATGGCCTCAGCGGATGACTTCCCA
ACCCATGGGAACTCTGTCCTCGTTGAGTTGCAGGATGTCTTCAAGTACAC
CCAGAATAACAATGGCTGGTTCTTCGGTAACCCCGACGACTTCGCAACCT
GCCAGTCACTCAAGGACGAGGCCCGCCGGGATAAGGGTCTTGAGCCGGAG
CCGGTCATCTCCATGGCTAAGTACTTTATCAAGCACTATGGACCCAACTA
GCCAAACACCGATGTGAGTTGTATGCCCGAACATTCAAGGAGTTTGACGC
CGTCATTGGCGCCTTCCCCGGGTGGTACTTCGAGAACTATGTCACTCCCG
AGTACGCGCAGGCCTTCGGTGGCTTCCCCATGTTCCCCGACAACGAGGGC
TACCTGACCTGGCACGCTCCCTTGGTAGGTGGCGAAGGCAAGGTCCAAAC
GGTCTCCATTGAGGACGATTTTGGTGAGATGGTGCACGGAATGTTTCTGA
ACCCACTGAAGTGGAAGAACAAGACCATTCAGTGCGTGAGTGATGCGTTC
ACGTATGAGGATATGGTGAAGACCTTCACTGAGGGCGGTAACGCAACCCG
GTGGGCCGACTGACGAGGATCTCGGCAACCGCCTCATCGAGATTGCAGCC
AAGGCAGGCGTGAAGGTCTTCATTTACAGTACCTGCGAGTCTCCTGCGAT
ATTTACCAAAGGCGTTGCACCCGTTCCGGGCATGGATGGTGTCCAGGGAA
GGTCCATCGCCCTCTCTCTCCTCAAGAGCCAGCAGAACTTCGTCGTCCGG
GCGCTTACTCGGAACCCTCAGTCGGAAAAGGCCAAAGAATTGGCTCGCCT
AGGAGCTGAGGTGGTTAAGGCTGATGGATTCAACGACAACGACATGCAGA
ATGCCCTGTCCGGTGCCTGGGGATTCTGGCTTAACACCCACCACCATGAC
CCAATGGCTCCTTTGCAGAAAGTGGTCGTGGTATACGGTGCCACTGTTAC
GGGAAAGAAATCTCGCTACATTCCCATGGCCTCAGCGGATGACTTCCCAA
CCCATGGGAACTCTGTCCTCGTTGAGTTGCAGGATGTCTTCAAGTACACC
CAGAATAACAATGGCTGGTTCTTCGGTAACCCCGACGACTTCGCAACCTG
CCAGTCACTCAAGGACGAGGCCCGCCGGGATAAGGGTCTTGAGCCGGAGC
CGGTCATCTCCATGGCTAAGTACTTTATCAAGCACTATGGACCCAACTAG
CCAAACACCGATGTGAGTTGTATGCCCGAACATTCAAGGAGTTTGACGCC
GTCATTGGCGCCTTCCCCGGGTGGTACTTCGAGAACTATGTCACTCCCGA
GTACGCGCAGGCCTTCGGTGGCTTCCCCATGTTCCCCGACAACGAGGGCT
ACCTGACCTGGCACGCTCCCTTGGTAGGTGGCGAAGGCAAGGTCCAAACG
GTCTCCATTGAGGACGATTTTGGTGAGATGGTGCACGGAATGTTTCTGAA
CCCACTGAAGTGGAAGAACAAGACCATTCAGTGCGTGAGTGATGCGTTCA
CGTATGAGGATATGGTGAAGACCTTCACTGAGGGCGGTAACGCAACCCGG
TGGGCCGACTGACGAGGATCTCGGCAACCGCCTCATCGAGATTGCAGCCA
AGGCAGGCGTGAAGGTCTTCATTTACAGTACCTGCGAGTCTCCTGCGATA
TTTACCAAAGGCGTTGCACCCGTTCCGGGCATGGATGGTGTCCAGGGAAG
GTCCATCGCCCTCTCTCTCCTCAAGAGCCAGCAGAACTTCGTCGTCCGGG
CGCTTACTCGGAACCCTCAGTCGGAAAAGGCCAAAGAATTGGCTCGCCTA
GGAGCTGAGGTGGTTAAGGCTGATGGATTCAACGACAACGACATGCAGAA
TGCCCTGTCCGGTGCCTGGGGATTCTGGCTTAACACCCACCACCATGACC
CAATGGCTCCTTTGCAGAAAGTGGTCGTGGTATACGGTGCCACTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_30760-T1 | ATCC64974_30760-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR008030 |
| DBxref | PFAM:PF05368 |
| DBxref | PFAM:PF13460 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000004.1 | supercontig | OGUI01000004.1:1277571..1278800 - |
|
