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ATCC64974_31270-T1, ATCC64974_31270-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_31270-T1
Unique NameATCC64974_31270-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:1425663..1427364-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_31270-T1 ID=ATCC64974_31270-T1|Name=ATCC64974_31270-T1|organism=Aspergillus niger N402|type=mRNA|length=1702bp|location=Sequence derived from alignment at OGUI01000004.1:1425663..1427364- (Aspergillus niger N402)
ATGTCTCCCCTTCAACATGCTGCTCCCGTCGTTCCCGGCGATAAGCCGTA
CGACCCAGAGATCAAGGATATGGCCGACTATATCCACAACTACAATGTGA
ACTCGGACTTGGCGGTACGAGGGTTCTCCCATGTTTTGATTGACTTTCTT
CTGTGTGCGATGGACTAATTGAAGACATCCTGACTTTTAGTATGACACCG
CCCGTTTGGTGTTCCTCGACACTCTGGGGTGCGGTTTGGAGGCATTGAAG
TTCAAGGAATGCTCCAAGCTCCTGGGCCCGGTGGTGGACGGCACCGTGGT
GCCCAACGGAACTCGCGTTCCTGGAACGCCCTACCAGCTGGACCCTGTCA
ACGGCGCTTTCAACATTGGCGCTATGATCCGCTGGCTGGACTACAACGAC
TGCTGGTTGGCTGCTGAATGGGGTCACCCCTCGGACAACCTGGGTGGAAT
CCTTGCTGTCGCCGACTGGGTTTCTCGCACAAACCGTGCGGGCGGAAACA
TTGCCAACGGCAAGATCTTCAAGGTCAAGGACGTCCTGGAGGCCATGATC
AAGGCGCACGAGATTCAGGGTGTGTTGGCGCTGGAGAACTCCTTCAACAA
GGTCGGCTTGGACCACGTCGTTCTCGTCAAGGTTGCTACCACTGCTGTCG
TTGCAAAGATGCTCGGCCTTAGCGAGAAGCAGACCGCAGATGCGATTACC
CAAGCATTCGTGGACGGACAGTCTCTCCGTACCTACAGACACTCCCCCAA
CACCATGTCGAGGAAGTCCTGGGCTGCGGGTGACGCATGCCAGCGGGCCG
TGAACCTCGTCTTGAAGGTGCAGAAGGGCGAGGGTGGCCTGCACACCGTC
CTGTCTGCTCCCGTTTGGGGTTTCTATGATGTCCTGTTCAAGGGCAACAA
GTTCCAGTTCCAGCGCCCCTACGGTAGTTATGTCATGGAGAATGTTCTGT
TCAAGGTCTCCTACCCGGGTAAGTCTAACATCAGACGTCAGTATGGAGGG
AATACTAACAGTTGCCATGATAGCCGAGTTCCACTCCCAGACCGCGATCG
AGGCCGCTGAGATGGTTAACGTGAAGCTCAAGGCTCTCGGAAAGACTGCC
GCCGACATTAAGGAGATCAGAAACCGCACCCACGAGGCGTGCATTCGTAT
CATCGACAAGCAGTTCAAGGCGATGGACAACTTCGCCGATCGTGACCACT
GTGTTCAGGTAGGTCCTGCCGTATCCAAAATTTGAGTGTCATGCACCACG
CATACTGACAACCGCGCCAGTACATGGTTGCGACCATGTTGGTCTTCAAC
CGGTTGACTGCCAACGACTACGCCGACGGATCGGAGGCTGCTACTTCTCA
GCTCCTGGAAGACCTGCGCAAGCGCATTTACTGTGTCGAGGATCCCCAGT
TCACTAAGGATTACCACGACCCTGCGAAGCGCACCATCCCCAACGCCCTT
ACCGTTACTCTGAATGACGGAACGGTGCTGGATGAGGTGGTTGTCGAGGC
ACCCTTGGGCCACCGCCTGCGGCGTGAGGAGGCCAAGCCGGAGATTCTGG
CCAAGTACAAGCGTCATCTGCAGGCGCACTTTGACCAGGCCCGCATTGAC
CAGCTGATTCAGGTTGGCTGGGACCAGGCCGCTCTTGAGGGCTACGACGT
TGACCAGTACGTCGACTTGTATGTCAAGGACCAGATGGTGGCAGCTCAGT
AG
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Coding sequence (CDS) from alignment at OGUI01000004.1:1425663..1427364-

>ATCC64974_31270-T1 ID=ATCC64974_31270-T1|Name=ATCC64974_31270-T1|organism=Aspergillus niger N402|type=CDS|length=6036bp|location=Sequence derived from alignment at OGUI01000004.1:1425663..1427364- (Aspergillus niger N402)
TACATGGTTGCGACCATGTTGGTCTTCAACCGGTTGACTGCCAACGACTA
CGCCGACGGATCGGAGGCTGCTACTTCTCAGCTCCTGGAAGACCTGCGCA
AGCGCATTTACTGTGTCGAGGATCCCCAGTTCACTAAGGATTACCACGAC
CCTGCGAAGCGCACCATCCCCAACGCCCTTACCGTTACTCTGAATGACGG
AACGGTGCTGGATGAGGTGGTTGTCGAGGCACCCTTGGGCCACCGCCTGC
GGCGTGAGGAGGCCAAGCCGGAGATTCTGGCCAAGTACAAGCGTCATCTG
CAGGCGCACTTTGACCAGGCCCGCATTGACCAGCTGATTCAGGTTGGCTG
GGACCAGGCCGCTCTTGAGGGCTACGACGTTGACCAGTACGTCGACTTGT
ATGTCAAGGACCAGATGGTGGCAGCTCAGTAGCCGAGTTCCACTCCCAGA
CCGCGATCGAGGCCGCTGAGATGGTTAACGTGAAGCTCAAGGCTCTCGGA
AAGACTGCCGCCGACATTAAGGAGATCAGAAACCGCACCCACGAGGCGTG
CATTCGTATCATCGACAAGCAGTTCAAGGCGATGGACAACTTCGCCGATC
GTGACCACTGTGTTCAGTATGACACCGCCCGTTTGGTGTTCCTCGACACT
CTGGGGTGCGGTTTGGAGGCATTGAAGTTCAAGGAATGCTCCAAGCTCCT
GGGCCCGGTGGTGGACGGCACCGTGGTGCCCAACGGAACTCGCGTTCCTG
GAACGCCCTACCAGCTGGACCCTGTCAACGGCGCTTTCAACATTGGCGCT
ATGATCCGCTGGCTGGACTACAACGACTGCTGGTTGGCTGCTGAATGGGG
TCACCCCTCGGACAACCTGGGTGGAATCCTTGCTGTCGCCGACTGGGTTT
CTCGCACAAACCGTGCGGGCGGAAACATTGCCAACGGCAAGATCTTCAAG
GTCAAGGACGTCCTGGAGGCCATGATCAAGGCGCACGAGATTCAGGGTGT
GTTGGCGCTGGAGAACTCCTTCAACAAGGTCGGCTTGGACCACGTCGTTC
TCGTCAAGGTTGCTACCACTGCTGTCGTTGCAAAGATGCTCGGCCTTAGC
GAGAAGCAGACCGCAGATGCGATTACCCAAGCATTCGTGGACGGACAGTC
TCTCCGTACCTACAGACACTCCCCCAACACCATGTCGAGGAAGTCCTGGG
CTGCGGGTGACGCATGCCAGCGGGCCGTGAACCTCGTCTTGAAGGTGCAG
AAGGGCGAGGGTGGCCTGCACACCGTCCTGTCTGCTCCCGTTTGGGGTTT
CTATGATGTCCTGTTCAAGGGCAACAAGTTCCAGTTCCAGCGCCCCTACG
GTAGTTATGTCATGGAGAATGTTCTGTTCAAGGTCTCCTACCCGGATGTC
TCCCCTTCAACATGCTGCTCCCGTCGTTCCCGGCGATAAGCCGTACGACC
CAGAGATCAAGGATATGGCCGACTATATCCACAACTACAATGTGAACTCG
GACTTGGCGTACATGGTTGCGACCATGTTGGTCTTCAACCGGTTGACTGC
CAACGACTACGCCGACGGATCGGAGGCTGCTACTTCTCAGCTCCTGGAAG
ACCTGCGCAAGCGCATTTACTGTGTCGAGGATCCCCAGTTCACTAAGGAT
TACCACGACCCTGCGAAGCGCACCATCCCCAACGCCCTTACCGTTACTCT
GAATGACGGAACGGTGCTGGATGAGGTGGTTGTCGAGGCACCCTTGGGCC
ACCGCCTGCGGCGTGAGGAGGCCAAGCCGGAGATTCTGGCCAAGTACAAG
CGTCATCTGCAGGCGCACTTTGACCAGGCCCGCATTGACCAGCTGATTCA
GGTTGGCTGGGACCAGGCCGCTCTTGAGGGCTACGACGTTGACCAGTACG
TCGACTTGTATGTCAAGGACCAGATGGTGGCAGCTCAGTAGCCGAGTTCC
ACTCCCAGACCGCGATCGAGGCCGCTGAGATGGTTAACGTGAAGCTCAAG
GCTCTCGGAAAGACTGCCGCCGACATTAAGGAGATCAGAAACCGCACCCA
CGAGGCGTGCATTCGTATCATCGACAAGCAGTTCAAGGCGATGGACAACT
TCGCCGATCGTGACCACTGTGTTCAGTATGACACCGCCCGTTTGGTGTTC
CTCGACACTCTGGGGTGCGGTTTGGAGGCATTGAAGTTCAAGGAATGCTC
CAAGCTCCTGGGCCCGGTGGTGGACGGCACCGTGGTGCCCAACGGAACTC
GCGTTCCTGGAACGCCCTACCAGCTGGACCCTGTCAACGGCGCTTTCAAC
ATTGGCGCTATGATCCGCTGGCTGGACTACAACGACTGCTGGTTGGCTGC
TGAATGGGGTCACCCCTCGGACAACCTGGGTGGAATCCTTGCTGTCGCCG
ACTGGGTTTCTCGCACAAACCGTGCGGGCGGAAACATTGCCAACGGCAAG
ATCTTCAAGGTCAAGGACGTCCTGGAGGCCATGATCAAGGCGCACGAGAT
TCAGGGTGTGTTGGCGCTGGAGAACTCCTTCAACAAGGTCGGCTTGGACC
ACGTCGTTCTCGTCAAGGTTGCTACCACTGCTGTCGTTGCAAAGATGCTC
GGCCTTAGCGAGAAGCAGACCGCAGATGCGATTACCCAAGCATTCGTGGA
CGGACAGTCTCTCCGTACCTACAGACACTCCCCCAACACCATGTCGAGGA
AGTCCTGGGCTGCGGGTGACGCATGCCAGCGGGCCGTGAACCTCGTCTTG
AAGGTGCAGAAGGGCGAGGGTGGCCTGCACACCGTCCTGTCTGCTCCCGT
TTGGGGTTTCTATGATGTCCTGTTCAAGGGCAACAAGTTCCAGTTCCAGC
GCCCCTACGGTAGTTATGTCATGGAGAATGTTCTGTTCAAGGTCTCCTAC
CCGGATGTCTCCCCTTCAACATGCTGCTCCCGTCGTTCCCGGCGATAAGC
CGTACGACCCAGAGATCAAGGATATGGCCGACTATATCCACAACTACAAT
GTGAACTCGGACTTGGCGTACATGGTTGCGACCATGTTGGTCTTCAACCG
GTTGACTGCCAACGACTACGCCGACGGATCGGAGGCTGCTACTTCTCAGC
TCCTGGAAGACCTGCGCAAGCGCATTTACTGTGTCGAGGATCCCCAGTTC
ACTAAGGATTACCACGACCCTGCGAAGCGCACCATCCCCAACGCCCTTAC
CGTTACTCTGAATGACGGAACGGTGCTGGATGAGGTGGTTGTCGAGGCAC
CCTTGGGCCACCGCCTGCGGCGTGAGGAGGCCAAGCCGGAGATTCTGGCC
AAGTACAAGCGTCATCTGCAGGCGCACTTTGACCAGGCCCGCATTGACCA
GCTGATTCAGGTTGGCTGGGACCAGGCCGCTCTTGAGGGCTACGACGTTG
ACCAGTACGTCGACTTGTATGTCAAGGACCAGATGGTGGCAGCTCAGTAG
CCGAGTTCCACTCCCAGACCGCGATCGAGGCCGCTGAGATGGTTAACGTG
AAGCTCAAGGCTCTCGGAAAGACTGCCGCCGACATTAAGGAGATCAGAAA
CCGCACCCACGAGGCGTGCATTCGTATCATCGACAAGCAGTTCAAGGCGA
TGGACAACTTCGCCGATCGTGACCACTGTGTTCAGTATGACACCGCCCGT
TTGGTGTTCCTCGACACTCTGGGGTGCGGTTTGGAGGCATTGAAGTTCAA
GGAATGCTCCAAGCTCCTGGGCCCGGTGGTGGACGGCACCGTGGTGCCCA
ACGGAACTCGCGTTCCTGGAACGCCCTACCAGCTGGACCCTGTCAACGGC
GCTTTCAACATTGGCGCTATGATCCGCTGGCTGGACTACAACGACTGCTG
GTTGGCTGCTGAATGGGGTCACCCCTCGGACAACCTGGGTGGAATCCTTG
CTGTCGCCGACTGGGTTTCTCGCACAAACCGTGCGGGCGGAAACATTGCC
AACGGCAAGATCTTCAAGGTCAAGGACGTCCTGGAGGCCATGATCAAGGC
GCACGAGATTCAGGGTGTGTTGGCGCTGGAGAACTCCTTCAACAAGGTCG
GCTTGGACCACGTCGTTCTCGTCAAGGTTGCTACCACTGCTGTCGTTGCA
AAGATGCTCGGCCTTAGCGAGAAGCAGACCGCAGATGCGATTACCCAAGC
ATTCGTGGACGGACAGTCTCTCCGTACCTACAGACACTCCCCCAACACCA
TGTCGAGGAAGTCCTGGGCTGCGGGTGACGCATGCCAGCGGGCCGTGAAC
CTCGTCTTGAAGGTGCAGAAGGGCGAGGGTGGCCTGCACACCGTCCTGTC
TGCTCCCGTTTGGGGTTTCTATGATGTCCTGTTCAAGGGCAACAAGTTCC
AGTTCCAGCGCCCCTACGGTAGTTATGTCATGGAGAATGTTCTGTTCAAG
GTCTCCTACCCGGATGTCTCCCCTTCAACATGCTGCTCCCGTCGTTCCCG
GCGATAAGCCGTACGACCCAGAGATCAAGGATATGGCCGACTATATCCAC
AACTACAATGTGAACTCGGACTTGGCGTACATGGTTGCGACCATGTTGGT
CTTCAACCGGTTGACTGCCAACGACTACGCCGACGGATCGGAGGCTGCTA
CTTCTCAGCTCCTGGAAGACCTGCGCAAGCGCATTTACTGTGTCGAGGAT
CCCCAGTTCACTAAGGATTACCACGACCCTGCGAAGCGCACCATCCCCAA
CGCCCTTACCGTTACTCTGAATGACGGAACGGTGCTGGATGAGGTGGTTG
TCGAGGCACCCTTGGGCCACCGCCTGCGGCGTGAGGAGGCCAAGCCGGAG
ATTCTGGCCAAGTACAAGCGTCATCTGCAGGCGCACTTTGACCAGGCCCG
CATTGACCAGCTGATTCAGGTTGGCTGGGACCAGGCCGCTCTTGAGGGCT
ACGACGTTGACCAGTACGTCGACTTGTATGTCAAGGACCAGATGGTGGCA
GCTCAGTAGCCGAGTTCCACTCCCAGACCGCGATCGAGGCCGCTGAGATG
GTTAACGTGAAGCTCAAGGCTCTCGGAAAGACTGCCGCCGACATTAAGGA
GATCAGAAACCGCACCCACGAGGCGTGCATTCGTATCATCGACAAGCAGT
TCAAGGCGATGGACAACTTCGCCGATCGTGACCACTGTGTTCAGTATGAC
ACCGCCCGTTTGGTGTTCCTCGACACTCTGGGGTGCGGTTTGGAGGCATT
GAAGTTCAAGGAATGCTCCAAGCTCCTGGGCCCGGTGGTGGACGGCACCG
TGGTGCCCAACGGAACTCGCGTTCCTGGAACGCCCTACCAGCTGGACCCT
GTCAACGGCGCTTTCAACATTGGCGCTATGATCCGCTGGCTGGACTACAA
CGACTGCTGGTTGGCTGCTGAATGGGGTCACCCCTCGGACAACCTGGGTG
GAATCCTTGCTGTCGCCGACTGGGTTTCTCGCACAAACCGTGCGGGCGGA
AACATTGCCAACGGCAAGATCTTCAAGGTCAAGGACGTCCTGGAGGCCAT
GATCAAGGCGCACGAGATTCAGGGTGTGTTGGCGCTGGAGAACTCCTTCA
ACAAGGTCGGCTTGGACCACGTCGTTCTCGTCAAGGTTGCTACCACTGCT
GTCGTTGCAAAGATGCTCGGCCTTAGCGAGAAGCAGACCGCAGATGCGAT
TACCCAAGCATTCGTGGACGGACAGTCTCTCCGTACCTACAGACACTCCC
CCAACACCATGTCGAGGAAGTCCTGGGCTGCGGGTGACGCATGCCAGCGG
GCCGTGAACCTCGTCTTGAAGGTGCAGAAGGGCGAGGGTGGCCTGCACAC
CGTCCTGTCTGCTCCCGTTTGGGGTTTCTATGATGTCCTGTTCAAGGGCA
ACAAGTTCCAGTTCCAGCGCCCCTACGGTAGTTATGTCATGGAGAATGTT
CTGTTCAAGGTCTCCTACCCGGATGTCTCCCCTTCAACATGCTGCTCCCG
TCGTTCCCGGCGATAAGCCGTACGACCCAGAGATCAAGGATATGGCCGAC
TATATCCACAACTACAATGTGAACTCGGACTTGGCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0019629propionate catabolic process, 2-methylcitrate cycle
Vocabulary: Molecular Function
TermDefinition
GO:00515372 iron, 2 sulfur cluster binding
GO:00475472-methylcitrate dehydratase activity
GO:0016829lyase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PDH1ATCC64974_31270Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_31270-T1ATCC64974_31270-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_31270-T1.cdsATCC64974_31270-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_31270-T1.exon4ATCC64974_31270-T1.exon4Aspergillus niger N402exon
ATCC64974_31270-T1.exon3ATCC64974_31270-T1.exon3Aspergillus niger N402exon
ATCC64974_31270-T1.exon2ATCC64974_31270-T1.exon2Aspergillus niger N402exon
ATCC64974_31270-T1.exon1ATCC64974_31270-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR036148
DBxrefInterPro:IPR012705
DBxrefInterPro:IPR005656
DBxrefInterPro:IPR042188
DBxrefInterPro:IPR042183
DBxrefPFAM:PF03972
ProductATP-binding cassette transporter CGR1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:1425663..1427364 -
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