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ATCC64974_31590-T1, ATCC64974_31590-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_31590-T1
Unique NameATCC64974_31590-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:1524534..1525784+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_31590-T1 ID=ATCC64974_31590-T1|Name=ATCC64974_31590-T1|organism=Aspergillus niger N402|type=mRNA|length=1251bp|location=Sequence derived from alignment at OGUI01000004.1:1524534..1525784+ (Aspergillus niger N402)
ATGGCGCCCGCAAGCACTTCTCACCGACAGACGCATAATCTGCTCTTGAT
TTCAAAGCTTCTTAGCCTGAGAGATACCGCATCACCGCTTACCTTGGTCT
TGGACTCACTAGAGCAGCCCGCGACCCCATTGACCAAAGAATACATTCGG
CGTGCAAAGGTAGGCATGCTGTTTGCTCTGAGAATTGGAGGGCTGTTCGC
ACAGTTGAAAGTCGGCTACGAGGCAGTTGAACAATGGCCCTCGTGCCATT
AAGTGCCTGTTCCGTCATTGCTTGCCGACGTGGCTAACTGTCGTCGCAAC
AGCTTTCCAGGACCCATGTAACCCTCCTTGCCTTTGAAACATTGAAACCC
CCGGAGGGCGTCGATGCATTCATTCCCGCTCGCCGGAAGAGTCCTTTAGA
GATCCTGAAAGCAGTTGGCGCTGCTTACCAAAATGTCTCATCGAATAGCC
CTACCCGAAGTATGCCTATCCCAAGCTTCTTCCGCCGAGCTTCATCCGTG
AATTGGCTAATGTATCCAAGGGAGACTCATCCTCATTGACGCCATCAACC
CGCTTCTACACTCGAAAAAGAATGATCCTCAGTTCCATGTATCACAATTT
CTAAGCTCCTTCCTGATTCCACCGAATCCCACAGCTCCGAAGGTGGAGGT
GTCGCTCGTGGTAAACTTTCATCAGGATGTTCCCAGCCCACCTGCTCTCT
CGCCCTACGCACCCTCGCCCCTCTCAATGCTGACATACCTCGCTACTACA
ATCATCACACTCCATTCATTCTCGCATATTCTCGCGCAGAAAGCGGCACG
CGATCGGAGTTTGGCCGCGCCTGTCTTTGGTCTTGAAGAAGAGCAGGATG
GTGTGCTCCTTGGCCGACTGGACAGACCGAGTGGTCAAGACTCATCAGAG
GGGATTGTACTCGAGCTGGAGCACCGCAGAAAGAGTGGTCGCGGCGTCTT
GGAATGGTACTTCCTTCCTCCTGCGTCTCGTTACCCTCCCCAATACGTGA
AGGAGATTGTGACGTTGCTGGACGACCATCCCTTGTACCGCCCGCCGCAG
GAGCCGGACGCTGGTGCAGGCGAAGAAGAGCCCGAATCAACATTCGAATT
GCGCCTTACGGAAAGACAGAGACGAGAGCGAGAGGGTGTGGTGCTGCCGT
ACTTCGATGCCCAGCAGGGCGACGGTCCTGGTGAAGGAGGACGCATCTTA
TACGACATGGGAGAAGAGGACGATTTTGACGAAGAGGAAGATGAAATCTA
G
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Coding sequence (CDS) from alignment at OGUI01000004.1:1524534..1525784+

>ATCC64974_31590-T1 ID=ATCC64974_31590-T1|Name=ATCC64974_31590-T1|organism=Aspergillus niger N402|type=CDS|length=3141bp|location=Sequence derived from alignment at OGUI01000004.1:1524534..1525784+ (Aspergillus niger N402)
ATGGCGCCCGCAAGCACTTCTCACCGACAGACGCATAATCTGCTCTTGAT
TTCAAAGCTTCTTAGCCTGAGAGATACCGCATCACCGCTTACCTTGGTCT
TGGACTCACTAGAGCAGCCCGCGACCCCATTGACCAAAGAATACATTCGG
CGTGCAAAGCTTTCCAGGACCCATGTAACCCTCCTTGCCTTTGAAACATT
GAAACCCCCGGAGGGCGTCGATGCATTCATTCCCGCTCGCCGGAAGAGTC
CTTTAGAGATCCTGAAAGCAGTTGGCGCTGCTTACCAAAATGTCTCATCG
AATAGCCCTACCCGAAGGAGACTCATCCTCATTGACGCCATCAACCCGCT
TCTACACTCGAAAAAGAATGATCCTCAGTTCCATGTATCACAATTTCTAA
GCTCCTTCCTGATTCCACCGAATCCCACAGCTCCGAAGGTGGAGGTGTCG
CTCGTGGTAAACTTTCATCAGGATGTTCCCAGCCCACCTGCTCTCTCGCC
CTACGCACCCTCGCCCCTCTCAATGCTGACATACCTCGCTACTACAATCA
TCACACTCCATTCATTCTCGCATATTCTCGCGCAGAAAGCGGCACGCGAT
CGGAGTTTGGCCGCGCCTGTCTTTGGTCTTGAAGAAGAGCAGGATGGTGT
GCTCCTTGGCCGACTGGACAGACCGAGTGGTCAAGACTCATCAGAGGGGA
TTGTACTCGAGCTGGAGCACCGCAGAAAGAGTGGTCGCGGCGTCTTGGAA
TGGTACTTCCTTCCTCCTGCGTCTCGTTACCCTCCCCAATACGTGAAGGA
GATTGTGACGTTGCTGGACGACCATCCCTTGTACCGCCCGCCGCAGGAGC
CGGACGCTGGTGCAGGCGAAGAAGAGCCCGAATCAACATTCGAATTGCGC
CTTACGGAAAGACAGAGACGAGAGCGAGAGGGTGTGGTGCTGCCGTACTT
CGATGCCCAGCAGGGCGACGGTCCTGGTGAAGGAGGACGCATCTTATACG
ACATGGGAGAAGAGGACGATTTTGACGAAGAGGAAGATGAAATCTAGATG
GCGCCCGCAAGCACTTCTCACCGACAGACGCATAATCTGCTCTTGATTTC
AAAGCTTCTTAGCCTGAGAGATACCGCATCACCGCTTACCTTGGTCTTGG
ACTCACTAGAGCAGCCCGCGACCCCATTGACCAAAGAATACATTCGGCGT
GCAAAGCTTTCCAGGACCCATGTAACCCTCCTTGCCTTTGAAACATTGAA
ACCCCCGGAGGGCGTCGATGCATTCATTCCCGCTCGCCGGAAGAGTCCTT
TAGAGATCCTGAAAGCAGTTGGCGCTGCTTACCAAAATGTCTCATCGAAT
AGCCCTACCCGAAGGAGACTCATCCTCATTGACGCCATCAACCCGCTTCT
ACACTCGAAAAAGAATGATCCTCAGTTCCATGTATCACAATTTCTAAGCT
CCTTCCTGATTCCACCGAATCCCACAGCTCCGAAGGTGGAGGTGTCGCTC
GTGGTAAACTTTCATCAGGATGTTCCCAGCCCACCTGCTCTCTCGCCCTA
CGCACCCTCGCCCCTCTCAATGCTGACATACCTCGCTACTACAATCATCA
CACTCCATTCATTCTCGCATATTCTCGCGCAGAAAGCGGCACGCGATCGG
AGTTTGGCCGCGCCTGTCTTTGGTCTTGAAGAAGAGCAGGATGGTGTGCT
CCTTGGCCGACTGGACAGACCGAGTGGTCAAGACTCATCAGAGGGGATTG
TACTCGAGCTGGAGCACCGCAGAAAGAGTGGTCGCGGCGTCTTGGAATGG
TACTTCCTTCCTCCTGCGTCTCGTTACCCTCCCCAATACGTGAAGGAGAT
TGTGACGTTGCTGGACGACCATCCCTTGTACCGCCCGCCGCAGGAGCCGG
ACGCTGGTGCAGGCGAAGAAGAGCCCGAATCAACATTCGAATTGCGCCTT
ACGGAAAGACAGAGACGAGAGCGAGAGGGTGTGGTGCTGCCGTACTTCGA
TGCCCAGCAGGGCGACGGTCCTGGTGAAGGAGGACGCATCTTATACGACA
TGGGAGAAGAGGACGATTTTGACGAAGAGGAAGATGAAATCTAGATGGCG
CCCGCAAGCACTTCTCACCGACAGACGCATAATCTGCTCTTGATTTCAAA
GCTTCTTAGCCTGAGAGATACCGCATCACCGCTTACCTTGGTCTTGGACT
CACTAGAGCAGCCCGCGACCCCATTGACCAAAGAATACATTCGGCGTGCA
AAGCTTTCCAGGACCCATGTAACCCTCCTTGCCTTTGAAACATTGAAACC
CCCGGAGGGCGTCGATGCATTCATTCCCGCTCGCCGGAAGAGTCCTTTAG
AGATCCTGAAAGCAGTTGGCGCTGCTTACCAAAATGTCTCATCGAATAGC
CCTACCCGAAGGAGACTCATCCTCATTGACGCCATCAACCCGCTTCTACA
CTCGAAAAAGAATGATCCTCAGTTCCATGTATCACAATTTCTAAGCTCCT
TCCTGATTCCACCGAATCCCACAGCTCCGAAGGTGGAGGTGTCGCTCGTG
GTAAACTTTCATCAGGATGTTCCCAGCCCACCTGCTCTCTCGCCCTACGC
ACCCTCGCCCCTCTCAATGCTGACATACCTCGCTACTACAATCATCACAC
TCCATTCATTCTCGCATATTCTCGCGCAGAAAGCGGCACGCGATCGGAGT
TTGGCCGCGCCTGTCTTTGGTCTTGAAGAAGAGCAGGATGGTGTGCTCCT
TGGCCGACTGGACAGACCGAGTGGTCAAGACTCATCAGAGGGGATTGTAC
TCGAGCTGGAGCACCGCAGAAAGAGTGGTCGCGGCGTCTTGGAATGGTAC
TTCCTTCCTCCTGCGTCTCGTTACCCTCCCCAATACGTGAAGGAGATTGT
GACGTTGCTGGACGACCATCCCTTGTACCGCCCGCCGCAGGAGCCGGACG
CTGGTGCAGGCGAAGAAGAGCCCGAATCAACATTCGAATTGCGCCTTACG
GAAAGACAGAGACGAGAGCGAGAGGGTGTGGTGCTGCCGTACTTCGATGC
CCAGCAGGGCGACGGTCCTGGTGAAGGAGGACGCATCTTATACGACATGG
GAGAAGAGGACGATTTTGACGAAGAGGAAGATGAAATCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0033588Elongator holoenzyme complex
Vocabulary: Biological Process
TermDefinition
GO:0002098tRNA wobble uridine modification
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_31590ATCC64974_31590Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_31590-T1.exon1ATCC64974_31590-T1.exon1Aspergillus niger N402exon
ATCC64974_31590-T1.exon2ATCC64974_31590-T1.exon2Aspergillus niger N402exon
ATCC64974_31590-T1.exon3ATCC64974_31590-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_31590-T1.cdsATCC64974_31590-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_31590-T1ATCC64974_31590-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR019519
DBxrefPFAM:PF10483
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:1524534..1525784 +
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