You are here

Home

ATCC64974_31750-T1, ATCC64974_31750-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_31750-T1
Unique NameATCC64974_31750-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:1560906..1565414+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_31750-T1 ID=ATCC64974_31750-T1|Name=ATCC64974_31750-T1|organism=Aspergillus niger N402|type=mRNA|length=4509bp|location=Sequence derived from alignment at OGUI01000004.1:1560906..1565414+ (Aspergillus niger N402)
ATGCATCGTGGCAGCGTCGTATCCAGTTCTTCCGACACCTCTGGTGCACG
GGATTTCGATACCGCAGTCCGAACGTTGGCTCAGAGGCAGTCTCTAAGCC
ACGCTGTAGACGAGGCGGAACAAATATCAAAGTCACTCCAGTGGTTCACT
CCGGAACAGTCGCTTGCTCTCTGGGAAGCAGGGGCGTATCTCTTCCACCA
TGAAAGTTCACCTGAAGCTCGACGGAGTGGTTCGATGTTGTTGGAAGCGG
TTGCGGCACGGCAAGACCTGTCGCCAGCAGCGCGGCGCATCGTCTTCGAT
TCGATAGCAAAGCCATCAGACAATGATGTTGTTCCCGCGCGTGTCCAGTC
TCTGATAGCCCTATCGGATCATGGCCGGAAGTTGGAGTTTGCAGCCTCGT
CCATTCTTCCTGTGATATCAGCTTGCTTGTTGCCATTATACGAATTAGTT
TCATCTGCGCGGTTGAAAGCCAGGAAAACCAAAGTCGGCAAAACAAACGG
GCTAGGATACGATGGCGCTGTATTAGATGACCTCCTACAATTCGCGATCG
ATCTTATCACACTACAACGGAAGCCACCAAGCGACGAAGAAGTTCAGATG
TTGTTAGAACAGACTTTCACGATTTGCCGAAAGACAAGCGTTGCTGCTGA
CATTAAGAACTCCTTGGGCGTTTTTGATGCGGTAATACTTTATGCAGACG
TTCCGAATGGAAGCTTTGTTCCGATGCTCGAGGTATTATGCAGCATTCAT
GCATCTGTCAAATCGTTGTCCGGTCCCACGTCGAGAGCGGTCCGGAATCT
AGCAAAGTCGAGAAGACAGTCCGAGATGATGGAAAATTTACATGCTTTTC
TAAGGGAGTCCTGCGGCGAAAAGTGTCGTAACCTCAACGTTGTCCGAGGA
GCGGTTTATGTTTTCATGGATCTTGTGCGCGCGTATGGTCAAGATGGAAT
ACCCAAATTTCAGTTCGAGCATTTGATAGAGTCGCTTCAGGTTGTTGTAA
AGAAGGATGATGGCCGGTTGGAAGCGGATATCTTGGAGCTGTGTTTGAAC
GTTTTGGAAGGTGACTACGTTCACACGGCCCTGAACAATGACTGGAGCGA
GTTTGTGAATTTATTGAATGCATGCTCTCTCAGGGCCGTTGACGAACACG
AAGAATCCTCCTTCACAATGCCTGATGCCCAGCCGCGCGGCAGCGTGTTA
GACGACACACGGTCTAACATTCTGGCCAGCACCATTCAAATCGCATCTAC
CCTGGAAGCCCTTTGGGATCGCTTGAATCATCAGCAGCGGCTAGATGCCA
CCCGTTTCCTAATGAATGCCTGTCGACATATCGAGCCTCCCCAGGCCGAG
CTCGTCCTCAACACTATCCGCACCGAAGGGTTTTGCTCACCCGAGAGCCC
GGATTGGGTGCAGCAGAACCAACGTCTCATCCGATGCTTCATCCGCTCCC
GCAGCAAACCATCCGACGTTCGGATCCTGGCTTTGGATACTGTGAAGGAT
TCTTTCTCAACATATGATTCTCTGGTCCTCTTCCAGGAACACGGACTCCT
TGACCTCATGCTGGAAAGGTTTGCTGAGGAAGACGATATTTTGTTTCTAG
AATCTTTGGTCTCTTTCCTTGTCGATGCTTCCGTGCTCGTCAGTGATAAT
GAAAGTTTCAAGCGCTTGGTGGCAGTGTTAAGCGCGCCAATGAGTAAAGA
CCTGGACAAAGAGGGTATGATCGGCTCTGAGACTTCGACAACTTTGTCTT
CGGAACGCCGTTCTTTTAGCAGTGTTATGGAGCTGTCCTTGGCCAATATT
TGCACTATTGGGCTTGTCAGGATGTTTCTCCGATCCCTTAATATGTCAGC
GTCTAAGGCGGCTTTGGTGTATGAAGCACTCTTGAACATAGCTCAATGCT
CGGAGCGGCCGGTGGACTCGCGTTTGACATCACTAAAGCTATTATTCCGA
CTGCGATGCGATTCGTCGGGCTCGATTACCGTGACCTCCGTCTCTGAACA
GGATTTCACGATGAACGTTTCTGGGCGAAATGTCGAGGCAGGCTCCAAGC
AACAGGGTGACTCGGCTGTTGAACACAACGTTGATAGCGACCAAGGGCGA
CCAGCAGCCCATGCAAGGCATTCGGCTCGGGAGCCATCGGTGCTTTCTAG
GTCGTCAGGACGTAATCCAAGCATTCCCATTCGGGCTTCAAGACTGACGC
CTCCAATTTGGACCTTTGCGACCCCGCAAGCCCTTCCTGAAGCGCCCCCC
GATGAGTCGAGTCCATTCGTATACGCTTATGCGACGCCGGAAACGAGTCA
CACCTTAGAATCAGAATCTGCGCAAAAGGTCGCATTGAAGGCAAACATGT
GGCTTGAGACAGTCATCTCATTGCTGCAACGTGAATCCAACTGGGATCTC
TACAGCTACGTCCTCACCCATCTTGCAAGCCAACTTCAGAATAAAGATCT
CTTCAGCAACGCAGTTCCTCAAATCAAATTACTGCGTAGTATCCTTTGCG
ATCAGGTGAAGAACGACACGTTCCGTGAGCCGCCACCGTCCACTGGTGGG
AAGAAGACTGACGTGGCTGGCTACATCTTCGAGTTTCTCTGCTCGCTAAT
CAGCTATCATGAACATTTTGCCAAAAGCGAAGAAGATGAGCTTGTTCGCG
CATTCATGATGGGTATAATTGGATCATGGGGTGGTACTTCGCGCGGATGC
ATTCATGCACTCTCTGTCTGTTGTCATGAAATTCCGCTCTCGGTGACCAA
GTCCCTCAACGGAATCCTTGACAAAATGTCCAAAGTGATCACGATGTCCA
ATCTTGCTGTGCATATCTTGGAATTCTTGGCTCTTCTTGCACGCCTTCCT
GATGTCTATATTAATCTACGTGAGGAAGAGATTCGCACTGTTTTTGGTAT
CTGTATTCGATTCTTGCAGACCTCCAGAGAGCAGCGGTTTAAGGCTTCTG
AGTCGCCCACCAGGAATGTTCAGGTTCCGGCAAGGCTTGGGAGCGGTGTC
CGAGATACTATGGCTTCGCCCGCAGAGTCGTCTGATTCTTCACTCCAGGA
TGGGATGTCCAGATACATCTATACTCTTACGTATCATGTCATGATCTTTT
GGTTTCTTTCATTGAAATTGCAGGATCGAGCCAAGCACGTGAATTGGATA
ACTAGCAGACTCATATACCGGGATGAACACGGTAGAGAGACGGTTGAGGA
GCCAAGCCAGGTCTTCATCGACTTGATGCAGAGAGCAGCTTTCTCGGACT
TGGGAGACACTATACCATACCCAAACTTTCCTCCGACTCCGGAAGATGGG
CCTGTAGTGAAGAAGTCATGGATTGTAGGTATGAGCATTGTGACTGTTGA
GACGGCTGGAGTATCTGGCTTGACTCAGGTCACCAAAAGGCAAGCGTCAG
GAACTACCTACGCAATGTTTCAGCAACGAACTGCGCCCGTCCTTCCTCAC
CAGGTTCCGCCCACGCCAGATGCCCACTTGCATTCTGACACCATGCGCAC
TGCTGTCCTTCCAAGCCATATCATGCTTCAGCTGACAACCACGGCTTTCC
CGACTCCTACGGTGATGCAGCCAATTCCTCTTCCCGAAGATGACATTACA
CGCCGAGCACTAAACACCTTCGACCGCAACGACATTGTGGATGGGCACAA
GATTGGTGTTATATACATCGACAATGGCCAGACCACTGAAGCAGAGATCC
TGTCGAATACCAGCGGCAGCCCAGACTACGAATACTTTCTGTCGCGACTC
GGAACCAAGGTTCCGCTCCAGGGTGCTCGATTTAATACTCAGGGGTTGCA
TGCAGATTTCGATGGCCAATTCACCTATGCATGGCGTGACCGGGTTACGG
AAATTGTCTACCATGTTCCGACAATGATGCCTACGAACTTTGATAATGAT
CCATCCTGCATCAGCAAGAAACGCCACATCGGGAATGATTTCGTCAATAT
CGTGTTCAACCGGTCGAATACACCTTTCAACTTCAACACGATACCCTCTC
AGTTCAACTTTGTCAACATCGTTATTAACCCTGTGTGCCGTCTCACCACT
GATCCTGGCAGTGCGGAGTCGAGACGCACGGATTTTGAGAACATGTTCTA
CCAGGTGAAGGTGATGAGCAAGCCCGGGTTTCCGGAAATATCACCTGCCG
CGGTGCCAAAACTTATCTCCGGGAAGAACCTTGCCCCGTTCGTTCGCATT
CTTGCTCTTAACGCGTCTGTCTTCTCGCTCGTCTGGCACAGCCAAGGAGG
GGAGCACATTTCATCGTGGCGCAACAGGTTGCGTGAAATTAAGAGACTTC
GTGAGCGAGCGCTAGGAAACCAGGCTCAAAGTTCCGAGGCTGCCGAAGGG
ACTTATCCTGGTCAGCGCCGCAACACCAAAGCCAACATATTCTCCGAAGA
AGTGCCCTCGCGCAACACCTCGGTCCGGACCGATTTTGCTACCGATTGGA
ACGCAGCTGCAGACACGAATATCCTGCAGAACTTGGACTTTTCGCGCTGG
GGTCGTTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000004.1:1560906..1565414+

>ATCC64974_31750-T1 ID=ATCC64974_31750-T1|Name=ATCC64974_31750-T1|organism=Aspergillus niger N402|type=CDS|length=4509bp|location=Sequence derived from alignment at OGUI01000004.1:1560906..1565414+ (Aspergillus niger N402)
ATGCATCGTGGCAGCGTCGTATCCAGTTCTTCCGACACCTCTGGTGCACG
GGATTTCGATACCGCAGTCCGAACGTTGGCTCAGAGGCAGTCTCTAAGCC
ACGCTGTAGACGAGGCGGAACAAATATCAAAGTCACTCCAGTGGTTCACT
CCGGAACAGTCGCTTGCTCTCTGGGAAGCAGGGGCGTATCTCTTCCACCA
TGAAAGTTCACCTGAAGCTCGACGGAGTGGTTCGATGTTGTTGGAAGCGG
TTGCGGCACGGCAAGACCTGTCGCCAGCAGCGCGGCGCATCGTCTTCGAT
TCGATAGCAAAGCCATCAGACAATGATGTTGTTCCCGCGCGTGTCCAGTC
TCTGATAGCCCTATCGGATCATGGCCGGAAGTTGGAGTTTGCAGCCTCGT
CCATTCTTCCTGTGATATCAGCTTGCTTGTTGCCATTATACGAATTAGTT
TCATCTGCGCGGTTGAAAGCCAGGAAAACCAAAGTCGGCAAAACAAACGG
GCTAGGATACGATGGCGCTGTATTAGATGACCTCCTACAATTCGCGATCG
ATCTTATCACACTACAACGGAAGCCACCAAGCGACGAAGAAGTTCAGATG
TTGTTAGAACAGACTTTCACGATTTGCCGAAAGACAAGCGTTGCTGCTGA
CATTAAGAACTCCTTGGGCGTTTTTGATGCGGTAATACTTTATGCAGACG
TTCCGAATGGAAGCTTTGTTCCGATGCTCGAGGTATTATGCAGCATTCAT
GCATCTGTCAAATCGTTGTCCGGTCCCACGTCGAGAGCGGTCCGGAATCT
AGCAAAGTCGAGAAGACAGTCCGAGATGATGGAAAATTTACATGCTTTTC
TAAGGGAGTCCTGCGGCGAAAAGTGTCGTAACCTCAACGTTGTCCGAGGA
GCGGTTTATGTTTTCATGGATCTTGTGCGCGCGTATGGTCAAGATGGAAT
ACCCAAATTTCAGTTCGAGCATTTGATAGAGTCGCTTCAGGTTGTTGTAA
AGAAGGATGATGGCCGGTTGGAAGCGGATATCTTGGAGCTGTGTTTGAAC
GTTTTGGAAGGTGACTACGTTCACACGGCCCTGAACAATGACTGGAGCGA
GTTTGTGAATTTATTGAATGCATGCTCTCTCAGGGCCGTTGACGAACACG
AAGAATCCTCCTTCACAATGCCTGATGCCCAGCCGCGCGGCAGCGTGTTA
GACGACACACGGTCTAACATTCTGGCCAGCACCATTCAAATCGCATCTAC
CCTGGAAGCCCTTTGGGATCGCTTGAATCATCAGCAGCGGCTAGATGCCA
CCCGTTTCCTAATGAATGCCTGTCGACATATCGAGCCTCCCCAGGCCGAG
CTCGTCCTCAACACTATCCGCACCGAAGGGTTTTGCTCACCCGAGAGCCC
GGATTGGGTGCAGCAGAACCAACGTCTCATCCGATGCTTCATCCGCTCCC
GCAGCAAACCATCCGACGTTCGGATCCTGGCTTTGGATACTGTGAAGGAT
TCTTTCTCAACATATGATTCTCTGGTCCTCTTCCAGGAACACGGACTCCT
TGACCTCATGCTGGAAAGGTTTGCTGAGGAAGACGATATTTTGTTTCTAG
AATCTTTGGTCTCTTTCCTTGTCGATGCTTCCGTGCTCGTCAGTGATAAT
GAAAGTTTCAAGCGCTTGGTGGCAGTGTTAAGCGCGCCAATGAGTAAAGA
CCTGGACAAAGAGGGTATGATCGGCTCTGAGACTTCGACAACTTTGTCTT
CGGAACGCCGTTCTTTTAGCAGTGTTATGGAGCTGTCCTTGGCCAATATT
TGCACTATTGGGCTTGTCAGGATGTTTCTCCGATCCCTTAATATGTCAGC
GTCTAAGGCGGCTTTGGTGTATGAAGCACTCTTGAACATAGCTCAATGCT
CGGAGCGGCCGGTGGACTCGCGTTTGACATCACTAAAGCTATTATTCCGA
CTGCGATGCGATTCGTCGGGCTCGATTACCGTGACCTCCGTCTCTGAACA
GGATTTCACGATGAACGTTTCTGGGCGAAATGTCGAGGCAGGCTCCAAGC
AACAGGGTGACTCGGCTGTTGAACACAACGTTGATAGCGACCAAGGGCGA
CCAGCAGCCCATGCAAGGCATTCGGCTCGGGAGCCATCGGTGCTTTCTAG
GTCGTCAGGACGTAATCCAAGCATTCCCATTCGGGCTTCAAGACTGACGC
CTCCAATTTGGACCTTTGCGACCCCGCAAGCCCTTCCTGAAGCGCCCCCC
GATGAGTCGAGTCCATTCGTATACGCTTATGCGACGCCGGAAACGAGTCA
CACCTTAGAATCAGAATCTGCGCAAAAGGTCGCATTGAAGGCAAACATGT
GGCTTGAGACAGTCATCTCATTGCTGCAACGTGAATCCAACTGGGATCTC
TACAGCTACGTCCTCACCCATCTTGCAAGCCAACTTCAGAATAAAGATCT
CTTCAGCAACGCAGTTCCTCAAATCAAATTACTGCGTAGTATCCTTTGCG
ATCAGGTGAAGAACGACACGTTCCGTGAGCCGCCACCGTCCACTGGTGGG
AAGAAGACTGACGTGGCTGGCTACATCTTCGAGTTTCTCTGCTCGCTAAT
CAGCTATCATGAACATTTTGCCAAAAGCGAAGAAGATGAGCTTGTTCGCG
CATTCATGATGGGTATAATTGGATCATGGGGTGGTACTTCGCGCGGATGC
ATTCATGCACTCTCTGTCTGTTGTCATGAAATTCCGCTCTCGGTGACCAA
GTCCCTCAACGGAATCCTTGACAAAATGTCCAAAGTGATCACGATGTCCA
ATCTTGCTGTGCATATCTTGGAATTCTTGGCTCTTCTTGCACGCCTTCCT
GATGTCTATATTAATCTACGTGAGGAAGAGATTCGCACTGTTTTTGGTAT
CTGTATTCGATTCTTGCAGACCTCCAGAGAGCAGCGGTTTAAGGCTTCTG
AGTCGCCCACCAGGAATGTTCAGGTTCCGGCAAGGCTTGGGAGCGGTGTC
CGAGATACTATGGCTTCGCCCGCAGAGTCGTCTGATTCTTCACTCCAGGA
TGGGATGTCCAGATACATCTATACTCTTACGTATCATGTCATGATCTTTT
GGTTTCTTTCATTGAAATTGCAGGATCGAGCCAAGCACGTGAATTGGATA
ACTAGCAGACTCATATACCGGGATGAACACGGTAGAGAGACGGTTGAGGA
GCCAAGCCAGGTCTTCATCGACTTGATGCAGAGAGCAGCTTTCTCGGACT
TGGGAGACACTATACCATACCCAAACTTTCCTCCGACTCCGGAAGATGGG
CCTGTAGTGAAGAAGTCATGGATTGTAGGTATGAGCATTGTGACTGTTGA
GACGGCTGGAGTATCTGGCTTGACTCAGGTCACCAAAAGGCAAGCGTCAG
GAACTACCTACGCAATGTTTCAGCAACGAACTGCGCCCGTCCTTCCTCAC
CAGGTTCCGCCCACGCCAGATGCCCACTTGCATTCTGACACCATGCGCAC
TGCTGTCCTTCCAAGCCATATCATGCTTCAGCTGACAACCACGGCTTTCC
CGACTCCTACGGTGATGCAGCCAATTCCTCTTCCCGAAGATGACATTACA
CGCCGAGCACTAAACACCTTCGACCGCAACGACATTGTGGATGGGCACAA
GATTGGTGTTATATACATCGACAATGGCCAGACCACTGAAGCAGAGATCC
TGTCGAATACCAGCGGCAGCCCAGACTACGAATACTTTCTGTCGCGACTC
GGAACCAAGGTTCCGCTCCAGGGTGCTCGATTTAATACTCAGGGGTTGCA
TGCAGATTTCGATGGCCAATTCACCTATGCATGGCGTGACCGGGTTACGG
AAATTGTCTACCATGTTCCGACAATGATGCCTACGAACTTTGATAATGAT
CCATCCTGCATCAGCAAGAAACGCCACATCGGGAATGATTTCGTCAATAT
CGTGTTCAACCGGTCGAATACACCTTTCAACTTCAACACGATACCCTCTC
AGTTCAACTTTGTCAACATCGTTATTAACCCTGTGTGCCGTCTCACCACT
GATCCTGGCAGTGCGGAGTCGAGACGCACGGATTTTGAGAACATGTTCTA
CCAGGTGAAGGTGATGAGCAAGCCCGGGTTTCCGGAAATATCACCTGCCG
CGGTGCCAAAACTTATCTCCGGGAAGAACCTTGCCCCGTTCGTTCGCATT
CTTGCTCTTAACGCGTCTGTCTTCTCGCTCGTCTGGCACAGCCAAGGAGG
GGAGCACATTTCATCGTGGCGCAACAGGTTGCGTGAAATTAAGAGACTTC
GTGAGCGAGCGCTAGGAAACCAGGCTCAAAGTTCCGAGGCTGCCGAAGGG
ACTTATCCTGGTCAGCGCCGCAACACCAAAGCCAACATATTCTCCGAAGA
AGTGCCCTCGCGCAACACCTCGGTCCGGACCGATTTTGCTACCGATTGGA
ACGCAGCTGCAGACACGAATATCCTGCAGAACTTGGACTTTTCGCGCTGG
GGTCGTTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005096GTPase activator activity
Vocabulary: Biological Process
TermDefinition
GO:0043547positive regulation of GTPase activity
GO:0051056regulation of small GTPase mediated signal transduction
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_31750ATCC64974_31750Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_31750-T1.exon1ATCC64974_31750-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_31750-T1.cdsATCC64974_31750-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_31750-T1ATCC64974_31750-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR016024
DBxrefInterPro:IPR018515
DBxrefInterPro:IPR000331
DBxrefInterPro:IPR035974
DBxrefInterPro:IPR024584
DBxrefPFAM:PF03542
DBxrefPFAM:PF02145
DBxrefPFAM:PF11864
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:1560906..1565414 +
Powered by Drupal