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ATCC64974_32120-T1, ATCC64974_32120-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_32120-T1
Unique NameATCC64974_32120-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:1702000..1703137+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_32120-T1 ID=ATCC64974_32120-T1|Name=ATCC64974_32120-T1|organism=Aspergillus niger N402|type=mRNA|length=1138bp|location=Sequence derived from alignment at OGUI01000004.1:1702000..1703137+ (Aspergillus niger N402)
ATGGCTATCTCAGACCTACTGAATCGCCGTGTGCGAGCTGTCGCTCAGGA
CGACGAGGAGCTTTACTCTGACCAGTCTGGCTCGGATCAGGCGAGCGACG
ATCTCCGCTCTGACGAGTCAGGCTCAGAAAGTGGCAGTGATGGTTCCCTA
GACGAAGACGACGACGACGATGTGGTTAGTTTCCCCTCGTTTGGATAGAC
ATTGCAACATGCTGACTATCTCACAGTCTCAAGGCGACCCGGAAGATATG
GATGATGACGACGATGACGACGATGACGACGACGAAGATGACGAAGACGA
CAATGATGATGCCCAGGACGACGTTCAAGCCTCACTAAGCAGTATCTCGT
TCGGCGCATTGGCGAAAGCGCAAGCATCTATAGGACCCAAATCAAAGCGG
TCGTCCAAGGCCTCCCGGACAGAAGACGAGCCTGCCGCTCCTTCCCCCTT
AGACGACATTCGGGCGCGGATTCAAGAGGCACGCGAACAGAAACGCCAAG
CGCTGGCGAAAAATAAGGATTCGGAAAAGCTCTCTCGTTCCTCCAAGCAT
GCGCCGGCCGTACAATCCTCCAAACATGCCGTCTCCCGCAAACGGACCAT
CATTGAGCCGCCAAGTGTACCCAAGTCGCGAGACCCCCGTTTTGACCCGA
CTGTCCTGAGCCAGGGTGGTCGCGGAAACCCTCAAGGAACGAGCAACGCT
TACGCATTCTTGGACGAGTATCGCCGGGACGAACTGAAGCAGTTGAAGGA
ACAATACGCCAAGACGAAGAACCAAGAACAGAAAGAAGCTCTGAAGCGTA
CGATTCGGTCGACTCAAGACCGTCTTCGAGCGATGGAGAATAGGAAACGC
GAGAAGGAGATCTTAGCGGAGCATAAGAAGAAGGAGAAACAGCTCATCCG
CGAAGGAAAGAAGAGCAACCCGTACTTCTTGAAGAAGTCGGACCTGAAGA
AGCAGGTGCTGCTCAAGAAGTACGAGAATATGAACTCCAAGGACCGCACC
AAGGCACTCGAGAGGAAGCGCAAGAAGACTGCCGCCAAGGAAAGAAAGGA
GATGCCCATGGAGCGGAGAGCCTTGGCTGGCGACGATGCGCCGAGTGGCG
GTGGAGGTGGCGGCTGGAAACGCCGCAGAGTTGCATAG
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Coding sequence (CDS) from alignment at OGUI01000004.1:1702000..1703137+

>ATCC64974_32120-T1 ID=ATCC64974_32120-T1|Name=ATCC64974_32120-T1|organism=Aspergillus niger N402|type=CDS|length=2172bp|location=Sequence derived from alignment at OGUI01000004.1:1702000..1703137+ (Aspergillus niger N402)
ATGGCTATCTCAGACCTACTGAATCGCCGTGTGCGAGCTGTCGCTCAGGA
CGACGAGGAGCTTTACTCTGACCAGTCTGGCTCGGATCAGGCGAGCGACG
ATCTCCGCTCTGACGAGTCAGGCTCAGAAAGTGGCAGTGATGGTTCCCTA
GACGAAGACGACGACGACGATGTGTCTCAAGGCGACCCGGAAGATATGGA
TGATGACGACGATGACGACGATGACGACGACGAAGATGACGAAGACGACA
ATGATGATGCCCAGGACGACGTTCAAGCCTCACTAAGCAGTATCTCGTTC
GGCGCATTGGCGAAAGCGCAAGCATCTATAGGACCCAAATCAAAGCGGTC
GTCCAAGGCCTCCCGGACAGAAGACGAGCCTGCCGCTCCTTCCCCCTTAG
ACGACATTCGGGCGCGGATTCAAGAGGCACGCGAACAGAAACGCCAAGCG
CTGGCGAAAAATAAGGATTCGGAAAAGCTCTCTCGTTCCTCCAAGCATGC
GCCGGCCGTACAATCCTCCAAACATGCCGTCTCCCGCAAACGGACCATCA
TTGAGCCGCCAAGTGTACCCAAGTCGCGAGACCCCCGTTTTGACCCGACT
GTCCTGAGCCAGGGTGGTCGCGGAAACCCTCAAGGAACGAGCAACGCTTA
CGCATTCTTGGACGAGTATCGCCGGGACGAACTGAAGCAGTTGAAGGAAC
AATACGCCAAGACGAAGAACCAAGAACAGAAAGAAGCTCTGAAGCGTACG
ATTCGGTCGACTCAAGACCGTCTTCGAGCGATGGAGAATAGGAAACGCGA
GAAGGAGATCTTAGCGGAGCATAAGAAGAAGGAGAAACAGCTCATCCGCG
AAGGAAAGAAGAGCAACCCGTACTTCTTGAAGAAGTCGGACCTGAAGAAG
CAGGTGCTGCTCAAGAAGTACGAGAATATGAACTCCAAGGACCGCACCAA
GGCACTCGAGAGGAAGCGCAAGAAGACTGCCGCCAAGGAAAGAAAGGAGA
TGCCCATGGAGCGGAGAGCCTTGGCTGGCGACGATGCGCCGAGTGGCGGT
GGAGGTGGCGGCTGGAAACGCCGCAGAGTTGCATAGATGGCTATCTCAGA
CCTACTGAATCGCCGTGTGCGAGCTGTCGCTCAGGACGACGAGGAGCTTT
ACTCTGACCAGTCTGGCTCGGATCAGGCGAGCGACGATCTCCGCTCTGAC
GAGTCAGGCTCAGAAAGTGGCAGTGATGGTTCCCTAGACGAAGACGACGA
CGACGATGTGTCTCAAGGCGACCCGGAAGATATGGATGATGACGACGATG
ACGACGATGACGACGACGAAGATGACGAAGACGACAATGATGATGCCCAG
GACGACGTTCAAGCCTCACTAAGCAGTATCTCGTTCGGCGCATTGGCGAA
AGCGCAAGCATCTATAGGACCCAAATCAAAGCGGTCGTCCAAGGCCTCCC
GGACAGAAGACGAGCCTGCCGCTCCTTCCCCCTTAGACGACATTCGGGCG
CGGATTCAAGAGGCACGCGAACAGAAACGCCAAGCGCTGGCGAAAAATAA
GGATTCGGAAAAGCTCTCTCGTTCCTCCAAGCATGCGCCGGCCGTACAAT
CCTCCAAACATGCCGTCTCCCGCAAACGGACCATCATTGAGCCGCCAAGT
GTACCCAAGTCGCGAGACCCCCGTTTTGACCCGACTGTCCTGAGCCAGGG
TGGTCGCGGAAACCCTCAAGGAACGAGCAACGCTTACGCATTCTTGGACG
AGTATCGCCGGGACGAACTGAAGCAGTTGAAGGAACAATACGCCAAGACG
AAGAACCAAGAACAGAAAGAAGCTCTGAAGCGTACGATTCGGTCGACTCA
AGACCGTCTTCGAGCGATGGAGAATAGGAAACGCGAGAAGGAGATCTTAG
CGGAGCATAAGAAGAAGGAGAAACAGCTCATCCGCGAAGGAAAGAAGAGC
AACCCGTACTTCTTGAAGAAGTCGGACCTGAAGAAGCAGGTGCTGCTCAA
GAAGTACGAGAATATGAACTCCAAGGACCGCACCAAGGCACTCGAGAGGA
AGCGCAAGAAGACTGCCGCCAAGGAAAGAAAGGAGATGCCCATGGAGCGG
AGAGCCTTGGCTGGCGACGATGCGCCGAGTGGCGGTGGAGGTGGCGGCTG
GAAACGCCGCAGAGTTGCATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000469cleavage involved in rRNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RRP36ATCC64974_32120Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_32120-T1.exon1ATCC64974_32120-T1.exon1Aspergillus niger N402exon
ATCC64974_32120-T1.exon2ATCC64974_32120-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_32120-T1.cdsATCC64974_32120-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_32120-T1ATCC64974_32120-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09265M98
DBxrefInterPro:IPR009292
DBxrefPFAM:PF06102
ProductrRNA bioproteinsis protein rrp36
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:1702000..1703137 +
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