You are here

Home

ATCC64974_32460-T1, ATCC64974_32460-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_32460-T1
Unique NameATCC64974_32460-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:1808796..1810819+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_32460-T1 ID=ATCC64974_32460-T1|Name=ATCC64974_32460-T1|organism=Aspergillus niger N402|type=mRNA|length=2024bp|location=Sequence derived from alignment at OGUI01000004.1:1808796..1810819+ (Aspergillus niger N402)
ATGCGATCATCGGCCGTCCGGACCCTGCGGTGGGCGACACCCTTTCGCCC
ATCATGGAGTAGGTGCTTCACCGTGGCCCGGCAGGGCGCTGGTCCAGCTC
TCCATGCCCGGAGCTCGTCTCCGCGTGTGCCTCCGCGTCGATACTTCTCA
GTATCCTCACCAGCTCAATCCATATTCGATGCCGATTCCACCATATATGC
GCTTTCGACAGCATCTGGACGGGCTGCCATTGCCGTTGTGCGGGCATCGG
GACCTGCATGTGTGCAAGTATGAGAGCTCACTTCTGCCATTGAATTTCCT
CCCGACTCAGCTCAGCAGCGCCGGCAGCTAATAACGTCACTCACTCACGC
AGATCTACAAATCTCTCTGTCCAGAAGCACCTCTTCCCCGGCCCCGCCTC
GCAGTCGTCCGCACCCTGTACGATCCCTCCCAGAAACCCTCCCCCAACAC
CGTCCTCGACGCCGGCGCCTTAGTCCTATACTTCCCCGGCCCGAAGACCG
TGACTGGCGAAGATGTTCTCGAGCTGCACCTCCACGGTGGCCCAGCCATC
GTCAAATCCGTTCTGTCGTCCATCTCGCGTACAAACAACCCTGACTACAC
AGTCCGCTACGCCGAACCCGGCGAGTTCACCCGTCGAGCCTTCATGAACA
ACCGCCTAGACCTCCCGCAGATCGAAGCCCTGGGCGATACCTTGTCCGCT
GACACGGAGCAACAGCGCCGGCTTGCTGTCCGGGGTGCCAGCGATGCGCT
ATCGAAGCGGTACGAACAATGGCGACATCAATTGCTCTATGCGCGCGGCG
AACTAGAGGCGTTGATTGACTTCTCAGAGGATCAGCATTTCGACGAGTCC
ACCGAGGACCTGGTGTCCTCGGTTGCGGCTCAGGTGCGGGCTCTGCGGGC
TCAAATCGCCCTTCACATCCAGAATGCGTCCAAGGGCGAGCTCCTACGTA
ACGGAATCAAGGTCGCTCTCCTGGGGGCCCCGAATGCGGGGAAGAGCTCG
CTTTTGAATCGAATCGTTGGCAGAGAGGCCGCCATCGTTAGCACTGAGGA
AGGCACCACGCGGGACATCGTGGATGTCGGTGTCGACATCGGCGGCTGGT
ACTGCAAGCTCGGCGACATGGCAGGGATACGCTCCGAGCCAAATGATCCT
ACCGGACAGAAGAAGACGGTTGTGATTGGCGCCGTGGAACAAGAGGGCAT
CAGACGGGCAAAGGCACGTGCCTTGGAATCGGACGTGGTCATCGTGGTCG
TCTCAGTAGAAGAAGCCACCGATGGTACAGCGACGTACCGCCTCGCCGTC
GAGCAGGAGGTCGTCGACGCAGCCAACGACTGCGCTCGCGCCGGCAAGTG
CGTCGTCGTAACCATCAACAAATGTGACCGATTACCGGAGGGTAAATTGC
CCGCGCAGCTCATCGAGACAGTCAGCCAACTCTTCAAGGCGGCCCCGGAC
CAGCGCCAGCGTATCTTCGGCATCTCCTGTCTAGATGCCACCAACGGCCT
GAACCTCACCAGCCCCGGTTCCAGCCAGCTCTCCGATCCCGGCTACATTC
AGCAATTTCTACAAGGTCTGATGACTACATTCGAGGATATCGCCTCTCCA
ACAGGCATCGATGGGGACGAGAACGGAAAATACGATCATGCATATTGGGA
AGATTCACTCGGCGTGACGCATCGCCAAAGCTCTAATTTACAACGCTGTC
TCGAACACCTAGATGATTTCCTGACGCAAACTCAACCGCAATCCCAGACG
CCTATGCCTTCCTCATCTCGCCAATTCGCTCATGAATTCCCAGAAACGGA
CATGGACATGGACATTGACATCGTCACCGCCGCTGAACACCTGCGCTCTG
CCGCTGATACCATGGCGAAGATTACGGGCCGTGGGGAAAGCGGAGACGTG
GAAGATGTTCTGGGCGTTGTGTTTGAAAAGTAAGTTGCTATGTATTATAG
TGTGGTAGAGTGCTGTTTTTCTTTTGTTGTTCTTGTTGCTGACTGAGTCG
AATAGGTTCTGTGTGGGCAAGTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000004.1:1808796..1810819+

>ATCC64974_32460-T1 ID=ATCC64974_32460-T1|Name=ATCC64974_32460-T1|organism=Aspergillus niger N402|type=CDS|length=5589bp|location=Sequence derived from alignment at OGUI01000004.1:1808796..1810819+ (Aspergillus niger N402)
ATGCGATCATCGGCCGTCCGGACCCTGCGGTGGGCGACACCCTTTCGCCC
ATCATGGAGTAGGTGCTTCACCGTGGCCCGGCAGGGCGCTGGTCCAGCTC
TCCATGCCCGGAGCTCGTCTCCGCGTGTGCCTCCGCGTCGATACTTCTCA
GTATCCTCACCAGCTCAATCCATATTCGATGCCGATTCCACCATATATGC
GCTTTCGACAGCATCTGGACGGGCTGCCATTGCCGTTGTGCGGGCATCGG
GACCTGCATGTGTGCAAATCTACAAATCTCTCTGTCCAGAAGCACCTCTT
CCCCGGCCCCGCCTCGCAGTCGTCCGCACCCTGTACGATCCCTCCCAGAA
ACCCTCCCCCAACACCGTCCTCGACGCCGGCGCCTTAGTCCTATACTTCC
CCGGCCCGAAGACCGTGACTGGCGAAGATGTTCTCGAGCTGCACCTCCAC
GGTGGCCCAGCCATCGTCAAATCCGTTCTGTCGTCCATCTCGCGTACAAA
CAACCCTGACTACACAGTCCGCTACGCCGAACCCGGCGAGTTCACCCGTC
GAGCCTTCATGAACAACCGCCTAGACCTCCCGCAGATCGAAGCCCTGGGC
GATACCTTGTCCGCTGACACGGAGCAACAGCGCCGGCTTGCTGTCCGGGG
TGCCAGCGATGCGCTATCGAAGCGGTACGAACAATGGCGACATCAATTGC
TCTATGCGCGCGGCGAACTAGAGGCGTTGATTGACTTCTCAGAGGATCAG
CATTTCGACGAGTCCACCGAGGACCTGGTGTCCTCGGTTGCGGCTCAGGT
GCGGGCTCTGCGGGCTCAAATCGCCCTTCACATCCAGAATGCGTCCAAGG
GCGAGCTCCTACGTAACGGAATCAAGGTCGCTCTCCTGGGGGCCCCGAAT
GCGGGGAAGAGCTCGCTTTTGAATCGAATCGTTGGCAGAGAGGCCGCCAT
CGTTAGCACTGAGGAAGGCACCACGCGGGACATCGTGGATGTCGGTGTCG
ACATCGGCGGCTGGTACTGCAAGCTCGGCGACATGGCAGGGATACGCTCC
GAGCCAAATGATCCTACCGGACAGAAGAAGACGGTTGTGATTGGCGCCGT
GGAACAAGAGGGCATCAGACGGGCAAAGGCACGTGCCTTGGAATCGGACG
TGGTCATCGTGGTCGTCTCAGTAGAAGAAGCCACCGATGGTACAGCGACG
TACCGCCTCGCCGTCGAGCAGGAGGTCGTCGACGCAGCCAACGACTGCGC
TCGCGCCGGCAAGTGCGTCGTCGTAACCATCAACAAATGTGACCGATTAC
CGGAGGGTAAATTGCCCGCGCAGCTCATCGAGACAGTCAGCCAACTCTTC
AAGGCGGCCCCGGACCAGCGCCAGCGTATCTTCGGCATCTCCTGTCTAGA
TGCCACCAACGGCCTGAACCTCACCAGCCCCGGTTCCAGCCAGCTCTCCG
ATCCCGGCTACATTCAGCAATTTCTACAAGGTCTGATGACTACATTCGAG
GATATCGCCTCTCCAACAGGCATCGATGGGGACGAGAACGGAAAATACGA
TCATGCATATTGGGAAGATTCACTCGGCGTGACGCATCGCCAAAGCTCTA
ATTTACAACGCTGTCTCGAACACCTAGATGATTTCCTGACGCAAACTCAA
CCGCAATCCCAGACGCCTATGCCTTCCTCATCTCGCCAATTCGCTCATGA
ATTCCCAGAAACGGACATGGACATGGACATTGACATCGTCACCGCCGCTG
AACACCTGCGCTCTGCCGCTGATACCATGGCGAAGATTACGGGCCGTGGG
GAAAGCGGAGACGTGGAAGATGTTCTGGGCGTTGTGTTTGAAAAGTTCTG
TGTGGGCAAGTGAATGCGATCATCGGCCGTCCGGACCCTGCGGTGGGCGA
CACCCTTTCGCCCATCATGGAGTAGGTGCTTCACCGTGGCCCGGCAGGGC
GCTGGTCCAGCTCTCCATGCCCGGAGCTCGTCTCCGCGTGTGCCTCCGCG
TCGATACTTCTCAGTATCCTCACCAGCTCAATCCATATTCGATGCCGATT
CCACCATATATGCGCTTTCGACAGCATCTGGACGGGCTGCCATTGCCGTT
GTGCGGGCATCGGGACCTGCATGTGTGCAAATCTACAAATCTCTCTGTCC
AGAAGCACCTCTTCCCCGGCCCCGCCTCGCAGTCGTCCGCACCCTGTACG
ATCCCTCCCAGAAACCCTCCCCCAACACCGTCCTCGACGCCGGCGCCTTA
GTCCTATACTTCCCCGGCCCGAAGACCGTGACTGGCGAAGATGTTCTCGA
GCTGCACCTCCACGGTGGCCCAGCCATCGTCAAATCCGTTCTGTCGTCCA
TCTCGCGTACAAACAACCCTGACTACACAGTCCGCTACGCCGAACCCGGC
GAGTTCACCCGTCGAGCCTTCATGAACAACCGCCTAGACCTCCCGCAGAT
CGAAGCCCTGGGCGATACCTTGTCCGCTGACACGGAGCAACAGCGCCGGC
TTGCTGTCCGGGGTGCCAGCGATGCGCTATCGAAGCGGTACGAACAATGG
CGACATCAATTGCTCTATGCGCGCGGCGAACTAGAGGCGTTGATTGACTT
CTCAGAGGATCAGCATTTCGACGAGTCCACCGAGGACCTGGTGTCCTCGG
TTGCGGCTCAGGTGCGGGCTCTGCGGGCTCAAATCGCCCTTCACATCCAG
AATGCGTCCAAGGGCGAGCTCCTACGTAACGGAATCAAGGTCGCTCTCCT
GGGGGCCCCGAATGCGGGGAAGAGCTCGCTTTTGAATCGAATCGTTGGCA
GAGAGGCCGCCATCGTTAGCACTGAGGAAGGCACCACGCGGGACATCGTG
GATGTCGGTGTCGACATCGGCGGCTGGTACTGCAAGCTCGGCGACATGGC
AGGGATACGCTCCGAGCCAAATGATCCTACCGGACAGAAGAAGACGGTTG
TGATTGGCGCCGTGGAACAAGAGGGCATCAGACGGGCAAAGGCACGTGCC
TTGGAATCGGACGTGGTCATCGTGGTCGTCTCAGTAGAAGAAGCCACCGA
TGGTACAGCGACGTACCGCCTCGCCGTCGAGCAGGAGGTCGTCGACGCAG
CCAACGACTGCGCTCGCGCCGGCAAGTGCGTCGTCGTAACCATCAACAAA
TGTGACCGATTACCGGAGGGTAAATTGCCCGCGCAGCTCATCGAGACAGT
CAGCCAACTCTTCAAGGCGGCCCCGGACCAGCGCCAGCGTATCTTCGGCA
TCTCCTGTCTAGATGCCACCAACGGCCTGAACCTCACCAGCCCCGGTTCC
AGCCAGCTCTCCGATCCCGGCTACATTCAGCAATTTCTACAAGGTCTGAT
GACTACATTCGAGGATATCGCCTCTCCAACAGGCATCGATGGGGACGAGA
ACGGAAAATACGATCATGCATATTGGGAAGATTCACTCGGCGTGACGCAT
CGCCAAAGCTCTAATTTACAACGCTGTCTCGAACACCTAGATGATTTCCT
GACGCAAACTCAACCGCAATCCCAGACGCCTATGCCTTCCTCATCTCGCC
AATTCGCTCATGAATTCCCAGAAACGGACATGGACATGGACATTGACATC
GTCACCGCCGCTGAACACCTGCGCTCTGCCGCTGATACCATGGCGAAGAT
TACGGGCCGTGGGGAAAGCGGAGACGTGGAAGATGTTCTGGGCGTTGTGT
TTGAAAAGTTCTGTGTGGGCAAGTGAATGCGATCATCGGCCGTCCGGACC
CTGCGGTGGGCGACACCCTTTCGCCCATCATGGAGTAGGTGCTTCACCGT
GGCCCGGCAGGGCGCTGGTCCAGCTCTCCATGCCCGGAGCTCGTCTCCGC
GTGTGCCTCCGCGTCGATACTTCTCAGTATCCTCACCAGCTCAATCCATA
TTCGATGCCGATTCCACCATATATGCGCTTTCGACAGCATCTGGACGGGC
TGCCATTGCCGTTGTGCGGGCATCGGGACCTGCATGTGTGCAAATCTACA
AATCTCTCTGTCCAGAAGCACCTCTTCCCCGGCCCCGCCTCGCAGTCGTC
CGCACCCTGTACGATCCCTCCCAGAAACCCTCCCCCAACACCGTCCTCGA
CGCCGGCGCCTTAGTCCTATACTTCCCCGGCCCGAAGACCGTGACTGGCG
AAGATGTTCTCGAGCTGCACCTCCACGGTGGCCCAGCCATCGTCAAATCC
GTTCTGTCGTCCATCTCGCGTACAAACAACCCTGACTACACAGTCCGCTA
CGCCGAACCCGGCGAGTTCACCCGTCGAGCCTTCATGAACAACCGCCTAG
ACCTCCCGCAGATCGAAGCCCTGGGCGATACCTTGTCCGCTGACACGGAG
CAACAGCGCCGGCTTGCTGTCCGGGGTGCCAGCGATGCGCTATCGAAGCG
GTACGAACAATGGCGACATCAATTGCTCTATGCGCGCGGCGAACTAGAGG
CGTTGATTGACTTCTCAGAGGATCAGCATTTCGACGAGTCCACCGAGGAC
CTGGTGTCCTCGGTTGCGGCTCAGGTGCGGGCTCTGCGGGCTCAAATCGC
CCTTCACATCCAGAATGCGTCCAAGGGCGAGCTCCTACGTAACGGAATCA
AGGTCGCTCTCCTGGGGGCCCCGAATGCGGGGAAGAGCTCGCTTTTGAAT
CGAATCGTTGGCAGAGAGGCCGCCATCGTTAGCACTGAGGAAGGCACCAC
GCGGGACATCGTGGATGTCGGTGTCGACATCGGCGGCTGGTACTGCAAGC
TCGGCGACATGGCAGGGATACGCTCCGAGCCAAATGATCCTACCGGACAG
AAGAAGACGGTTGTGATTGGCGCCGTGGAACAAGAGGGCATCAGACGGGC
AAAGGCACGTGCCTTGGAATCGGACGTGGTCATCGTGGTCGTCTCAGTAG
AAGAAGCCACCGATGGTACAGCGACGTACCGCCTCGCCGTCGAGCAGGAG
GTCGTCGACGCAGCCAACGACTGCGCTCGCGCCGGCAAGTGCGTCGTCGT
AACCATCAACAAATGTGACCGATTACCGGAGGGTAAATTGCCCGCGCAGC
TCATCGAGACAGTCAGCCAACTCTTCAAGGCGGCCCCGGACCAGCGCCAG
CGTATCTTCGGCATCTCCTGTCTAGATGCCACCAACGGCCTGAACCTCAC
CAGCCCCGGTTCCAGCCAGCTCTCCGATCCCGGCTACATTCAGCAATTTC
TACAAGGTCTGATGACTACATTCGAGGATATCGCCTCTCCAACAGGCATC
GATGGGGACGAGAACGGAAAATACGATCATGCATATTGGGAAGATTCACT
CGGCGTGACGCATCGCCAAAGCTCTAATTTACAACGCTGTCTCGAACACC
TAGATGATTTCCTGACGCAAACTCAACCGCAATCCCAGACGCCTATGCCT
TCCTCATCTCGCCAATTCGCTCATGAATTCCCAGAAACGGACATGGACAT
GGACATTGACATCGTCACCGCCGCTGAACACCTGCGCTCTGCCGCTGATA
CCATGGCGAAGATTACGGGCCGTGGGGAAAGCGGAGACGTGGAAGATGTT
CTGGGCGTTGTGTTTGAAAAGTTCTGTGTGGGCAAGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006400tRNA modification
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005515protein binding
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_32460ATCC64974_32460Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_32460-T1.exon1ATCC64974_32460-T1.exon1Aspergillus niger N402exon
ATCC64974_32460-T1.exon2ATCC64974_32460-T1.exon2Aspergillus niger N402exon
ATCC64974_32460-T1.exon3ATCC64974_32460-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_32460-T1.cdsATCC64974_32460-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_32460-T1ATCC64974_32460-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR031168
DBxrefInterPro:IPR004520
DBxrefInterPro:IPR005225
DBxrefInterPro:IPR027266
DBxrefInterPro:IPR025867
DBxrefInterPro:IPR018948
DBxrefInterPro:IPR006073
DBxrefPFAM:PF10396
DBxrefPFAM:PF12631
DBxrefPFAM:PF01926
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:1808796..1810819 +
Powered by Drupal