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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000004.1:1848187..1848672+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_32630-T1 ID=ATCC64974_32630-T1|Name=ATCC64974_32630-T1|organism=Aspergillus niger N402|type=mRNA|length=486bp|location=Sequence derived from alignment at OGUI01000004.1:1848187..1848672+ (Aspergillus niger N402)
ATGGCCACGAATTCTGGAGCCCCTGATCTGGGCAAAGATGGCTCCGGCTC
CATTGCTATCACCGTTGAGTTCACGTTCGGCTCTCACCCATATCATGCAA
GCACCCCAGGTTTGCACTCATTACTGATTCGGCTTTCGCAAACAGGGGAG
GTCTGGAGATCTTGTTTGCCAATGAGCGCAAACACCACGTCACGCTACCT
TCGCTTCTTGACGACGGCAGCCGGCCAACTATCAGCTACCTCCTGGGTCA
TCTGGTGAAGAACTACATGAAGGATCAGAGGCAGGAATTGTTCATACTGG
AAGGCAATGTGTACGTTCACCGTATGGGAATACACGGCAAGGCAAGAACA
CTGACGTTGGGCGAACAGTCGACCGGGAATCTTGGTTCTCATCAACGACG
CCGATTGGGAGCTCGAAGGCGAGGAGAACTACGAACTTCAACAAAATGAT
AACATTGTCTTCGTTTCTACGCTTCATGGGGGCTAG back to topCoding sequence (CDS) from alignment at OGUI01000004.1:1848187..1848672+ >ATCC64974_32630-T1 ID=ATCC64974_32630-T1|Name=ATCC64974_32630-T1|organism=Aspergillus niger N402|type=CDS|length=1071bp|location=Sequence derived from alignment at OGUI01000004.1:1848187..1848672+ (Aspergillus niger N402)
ATGGCCACGAATTCTGGAGCCCCTGATCTGGGCAAAGATGGCTCCGGCTC
CATTGCTATCACCGTTGAGTTCACGGGAGGTCTGGAGATCTTGTTTGCCA
ATGAGCGCAAACACCACGTCACGCTACCTTCGCTTCTTGACGACGGCAGC
CGGCCAACTATCAGCTACCTCCTGGGTCATCTGGTGAAGAACTACATGAA
GGATCAGAGGCAGGAATTGTTCATACTGGAAGGCAATGTTCGACCGGGAA
TCTTGGTTCTCATCAACGACGCCGATTGGGAGCTCGAAGGCGAGGAGAAC
TACGAACTTCAACAAAATGATAACATTGTCTTCGTTTCTACGCTTCATGG
GGGCTAGATGGCCACGAATTCTGGAGCCCCTGATCTGGGCAAAGATGGCT
CCGGCTCCATTGCTATCACCGTTGAGTTCACGGGAGGTCTGGAGATCTTG
TTTGCCAATGAGCGCAAACACCACGTCACGCTACCTTCGCTTCTTGACGA
CGGCAGCCGGCCAACTATCAGCTACCTCCTGGGTCATCTGGTGAAGAACT
ACATGAAGGATCAGAGGCAGGAATTGTTCATACTGGAAGGCAATGTTCGA
CCGGGAATCTTGGTTCTCATCAACGACGCCGATTGGGAGCTCGAAGGCGA
GGAGAACTACGAACTTCAACAAAATGATAACATTGTCTTCGTTTCTACGC
TTCATGGGGGCTAGATGGCCACGAATTCTGGAGCCCCTGATCTGGGCAAA
GATGGCTCCGGCTCCATTGCTATCACCGTTGAGTTCACGGGAGGTCTGGA
GATCTTGTTTGCCAATGAGCGCAAACACCACGTCACGCTACCTTCGCTTC
TTGACGACGGCAGCCGGCCAACTATCAGCTACCTCCTGGGTCATCTGGTG
AAGAACTACATGAAGGATCAGAGGCAGGAATTGTTCATACTGGAAGGCAA
TGTTCGACCGGGAATCTTGGTTCTCATCAACGACGCCGATTGGGAGCTCG
AAGGCGAGGAGAACTACGAACTTCAACAAAATGATAACATTGTCTTCGTT
TCTACGCTTCATGGGGGCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005737 | cytoplasm |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0034227 | tRNA thio-modification |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_32630-T1 | ATCC64974_32630-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265K1R |
| DBxref | InterPro:IPR016155 |
| DBxref | InterPro:IPR015221 |
| DBxref | InterPro:IPR012675 |
| DBxref | PFAM:PF09138 |
| DBxref | PFAM:PF02597 |
| Product | Ubiquitin- modifier 1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000004.1 | supercontig | OGUI01000004.1:1848187..1848672 + |
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