You are here

Home

ATCC64974_32680-T1, ATCC64974_32680-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_32680-T1
Unique NameATCC64974_32680-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:1870288..1871442-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_32680-T1 ID=ATCC64974_32680-T1|Name=ATCC64974_32680-T1|organism=Aspergillus niger N402|type=mRNA|length=1155bp|location=Sequence derived from alignment at OGUI01000004.1:1870288..1871442- (Aspergillus niger N402)
ATGGATATCGCCCTCGAAATTTGGGACACCTTTATTGGTGATCGTCTATA
CGCCTCTCTACTTCCTCTCTCTCTTGCCTCATCCGCCTCGCTCCCCGGCT
TCACTACTGTCACCAACAGCACCCTGTCGTTCTTTGGTGCAACCCAGCCC
TTCGTTTACGAACCGGCTACTCAATTGATCTACTTGGAGCCTTCCAAGTT
TGCCTATCTGAGCGCCTGGCCAAGGAACAATATCTACCGTCAATTCCTCA
GTTTCTTCTTGATCGTCTGGTATGTGCGCTTGTGTTCATTTTTCTCCGGT
GTTGTCGCCCCCTCCAATCTTTCCTTTGGCTAACAGGGTGGGCGCATTGT
TTGCGCCTGGATTAGGATCTTCGGTATCATCGTCTACTTCATTTCCGCAA
GTCTATCCTACATCTTCATCTGGGACAAGACCACCGTTCATCACCCTAAA
TACCTCAAGAACCAAATTCCTATGGAGATCGCCCAGACTATGCGCTCAAT
GCCGGTTATGTCCCTGTTGACTGCCCCTTTTCTGGTCGCCGAAGTCCGTG
GTTACGCCAAGCTTTATGATACCTTCTCCGACGAGCCATTCCCCTACTAC
AGTATTATCCAATTCCCGCTATTCATCATGTTCACCGATCTCTGCATCTA
CTGGATTCACCGCGGCCTGCACCACCCGCTTATTTATAAGACCTTGCACA
AGCCTCACCACAAATGGATTATGCCTAGTCCCTTCGCCTCCCACGCTTTT
CACCCACTTGACGGCTGGTCGCAGAGTGTCCCTTACCACGTGTTCCCGTT
CATCTTCCCGCTCCAGAAGCTGGCCTACGTCTTCCTCTTCGGATTCATCA
ACCTCTGGACCGTGCTGATTCACGACGGCGAATACGTTGCCAACAGCCCG
GTGATCAATGGAGCAGCCTGCCACACCATGCACCACCTGTACTTCAACTA
TAACTATGGCCAGTTCACAACCCTCTGGGATCGTCTGGGAGGCAGTTATC
GCAAGCCCAACGAGGAGCTCTTCCGCCGTGACACAAAGAATGGCGAGGAG
GAATGGAAGCGACAGACCAAGGAGATGGAAACCATTCTCAAGGATGTCGA
AGGCGATGATGACCGGGCGTACCTGGCCGATTCACAGACCAAGAAGAACC
TGTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000004.1:1870288..1871442-

>ATCC64974_32680-T1 ID=ATCC64974_32680-T1|Name=ATCC64974_32680-T1|organism=Aspergillus niger N402|type=CDS|length=2118bp|location=Sequence derived from alignment at OGUI01000004.1:1870288..1871442- (Aspergillus niger N402)
GATCTTCGGTATCATCGTCTACTTCATTTCCGCAAGTCTATCCTACATCT
TCATCTGGGACAAGACCACCGTTCATCACCCTAAATACCTCAAGAACCAA
ATTCCTATGGAGATCGCCCAGACTATGCGCTCAATGCCGGTTATGTCCCT
GTTGACTGCCCCTTTTCTGGTCGCCGAAGTCCGTGGTTACGCCAAGCTTT
ATGATACCTTCTCCGACGAGCCATTCCCCTACTACAGTATTATCCAATTC
CCGCTATTCATCATGTTCACCGATCTCTGCATCTACTGGATTCACCGCGG
CCTGCACCACCCGCTTATTTATAAGACCTTGCACAAGCCTCACCACAAAT
GGATTATGCCTAGTCCCTTCGCCTCCCACGCTTTTCACCCACTTGACGGC
TGGTCGCAGAGTGTCCCTTACCACGTGTTCCCGTTCATCTTCCCGCTCCA
GAAGCTGGCCTACGTCTTCCTCTTCGGATTCATCAACCTCTGGACCGTGC
TGATTCACGACGGCGAATACGTTGCCAACAGCCCGGTGATCAATGGAGCA
GCCTGCCACACCATGCACCACCTGTACTTCAACTATAACTATGGCCAGTT
CACAACCCTCTGGGATCGTCTGGGAGGCAGTTATCGCAAGCCCAACGAGG
AGCTCTTCCGCCGTGACACAAAGAATGGCGAGGAGGAATGGAAGCGACAG
ACCAAGGAGATGGAAACCATTCTCAAGGATGTCGAAGGCGATGATGACCG
GGCGTACCTGGCCGATTCACAGACCAAGAAGAACCTGTGAATGGATATCG
CCCTCGAAATTTGGGACACCTTTATTGGTGATCGTCTATACGCCTCTCTA
CTTCCTCTCTCTCTTGCCTCATCCGCCTCGCTCCCCGGCTTCACTACTGT
CACCAACAGCACCCTGTCGTTCTTTGGTGCAACCCAGCCCTTCGTTTACG
AACCGGCTACTCAATTGATCTACTTGGAGCCTTCCAAGTTTGCCTATCTG
AGCGCCTGGCCAAGGAACAATATCTACCGTCAATTCCTCAGTTTCTTCTT
GATCGTCTGGATCTTCGGTATCATCGTCTACTTCATTTCCGCAAGTCTAT
CCTACATCTTCATCTGGGACAAGACCACCGTTCATCACCCTAAATACCTC
AAGAACCAAATTCCTATGGAGATCGCCCAGACTATGCGCTCAATGCCGGT
TATGTCCCTGTTGACTGCCCCTTTTCTGGTCGCCGAAGTCCGTGGTTACG
CCAAGCTTTATGATACCTTCTCCGACGAGCCATTCCCCTACTACAGTATT
ATCCAATTCCCGCTATTCATCATGTTCACCGATCTCTGCATCTACTGGAT
TCACCGCGGCCTGCACCACCCGCTTATTTATAAGACCTTGCACAAGCCTC
ACCACAAATGGATTATGCCTAGTCCCTTCGCCTCCCACGCTTTTCACCCA
CTTGACGGCTGGTCGCAGAGTGTCCCTTACCACGTGTTCCCGTTCATCTT
CCCGCTCCAGAAGCTGGCCTACGTCTTCCTCTTCGGATTCATCAACCTCT
GGACCGTGCTGATTCACGACGGCGAATACGTTGCCAACAGCCCGGTGATC
AATGGAGCAGCCTGCCACACCATGCACCACCTGTACTTCAACTATAACTA
TGGCCAGTTCACAACCCTCTGGGATCGTCTGGGAGGCAGTTATCGCAAGC
CCAACGAGGAGCTCTTCCGCCGTGACACAAAGAATGGCGAGGAGGAATGG
AAGCGACAGACCAAGGAGATGGAAACCATTCTCAAGGATGTCGAAGGCGA
TGATGACCGGGCGTACCTGGCCGATTCACAGACCAAGAAGAACCTGTGAA
TGGATATCGCCCTCGAAATTTGGGACACCTTTATTGGTGATCGTCTATAC
GCCTCTCTACTTCCTCTCTCTCTTGCCTCATCCGCCTCGCTCCCCGGCTT
CACTACTGTCACCAACAGCACCCTGTCGTTCTTTGGTGCAACCCAGCCCT
TCGTTTACGAACCGGCTACTCAATTGATCTACTTGGAGCCTTCCAAGTTT
GCCTATCTGAGCGCCTGGCCAAGGAACAATATCTACCGTCAATTCCTCAG
TTTCTTCTTGATCGTCTG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0008610lipid biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0005506iron ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_32680ATCC64974_32680Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_32680-T1ATCC64974_32680-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_32680-T1.cdsATCC64974_32680-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_32680-T1.exon2ATCC64974_32680-T1.exon2Aspergillus niger N402exon
ATCC64974_32680-T1.exon1ATCC64974_32680-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR006694
DBxrefPFAM:PF04116
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:1870288..1871442 -
Powered by Drupal