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ATCC64974_32720-T1, ATCC64974_32720-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_32720-T1
Unique NameATCC64974_32720-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:1889271..1890475+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_32720-T1 ID=ATCC64974_32720-T1|Name=ATCC64974_32720-T1|organism=Aspergillus niger N402|type=mRNA|length=1205bp|location=Sequence derived from alignment at OGUI01000004.1:1889271..1890475+ (Aspergillus niger N402)
ATGTCTGGCGCAAGGCATTGGTAAGTGCTTCTCTTTACTCCATGTGATAT
GAATCCCAGTCATATCGGTCCTGACAATTGCTGGAATAGGGAGCAAGACA
AAGAGGCCACCGTCTACATCGGAAACCTCGATGAACGGGTTACAGATAGC
CTGGTATGGGAGCTGATGCTGCAGGCCGGGCGCATCGTTAACGTTCACCT
ACCGAAAGACCGAGTCACACAGTCGCATCAGGGCTATGGGTTCGTGGAAT
TCATCAGCGAGGAAGATGCCGAATACGCGTCACGAATCATGAACGGAATC
CGCCTGTATGGAAAGCCCATCCGCGTCAACAAAGCATCCGCCGACAAGCA
AAAGTCGGTGGAGATTGGGGCAGAGCTATTCGTCGGCAATCTTGATCCTA
TGGTTACGGAGCAAGTTCTTTATGACACATTCAGCCGCTTTGGAAACCTG
GTCAATATCCCCAAGGTAGGACTTTATCCTTTCTATAGGCCTGTCATGCG
GCACCGTGTCTCGGAGGGGAACTTACTAACCATGGCTGCTACTAGATTGC
GCGGGATGACAACAACCTGTCAAAGGGCTATGGATTTGTGTCGTTCGCCG
ACTTTGAGTCTTCGGACGCGGCCATAACCAACATGAACGGCCAATATCTT
ATGAACAAGCAGGTCTCCGTGCAATACGCCTATAAGAAAGATGGGAAAGG
TGAACGCCACGGTGATGAAGCAGAACGAATGCTGGCTGCACAAGCTCGCA
AACATAACGTGCGCCCACCAACCCAGCCGCTACCTCCACAATTCTCAAAC
CCAGGGACACCTATGGTGCCAGCTGCGATGGCCAACGGTGATAGCTCTCG
GCCAATGAGTACTAATCCACCAGACCTAAATATGGGCAGAGGTATGGCTC
CTCCGAATGTACCGTTCCAAAACGTACCTCCTCCACAAGCAAGCCGACCC
GTTCCACCTACATCTCTGGCGAACCCACCCCCAGGTTTACCAGCACGGCC
GCCACCTTCTCAGGCCGGATATGGCGGGCCGCAGTCCTTCCTCCCACCAG
GATTCAATGGTGCTGGTCAACAACCTCCCTTCCCTCAAGCAGCACCTCCG
CCAGGCTTTGCTCCACCGGGGTTCGGTTCACCGGCAGGAACACCTGGTCC
CCCACCTCCGTTGCCCCCGGGATTCCAGCAACCTGGCTATGCGCGCGGGC
GTTGA
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Coding sequence (CDS) from alignment at OGUI01000004.1:1889271..1890475+

>ATCC64974_32720-T1 ID=ATCC64974_32720-T1|Name=ATCC64974_32720-T1|organism=Aspergillus niger N402|type=CDS|length=3168bp|location=Sequence derived from alignment at OGUI01000004.1:1889271..1890475+ (Aspergillus niger N402)
ATGTCTGGCGCAAGGCATTGGGAGCAAGACAAAGAGGCCACCGTCTACAT
CGGAAACCTCGATGAACGGGTTACAGATAGCCTGGTATGGGAGCTGATGC
TGCAGGCCGGGCGCATCGTTAACGTTCACCTACCGAAAGACCGAGTCACA
CAGTCGCATCAGGGCTATGGGTTCGTGGAATTCATCAGCGAGGAAGATGC
CGAATACGCGTCACGAATCATGAACGGAATCCGCCTGTATGGAAAGCCCA
TCCGCGTCAACAAAGCATCCGCCGACAAGCAAAAGTCGGTGGAGATTGGG
GCAGAGCTATTCGTCGGCAATCTTGATCCTATGGTTACGGAGCAAGTTCT
TTATGACACATTCAGCCGCTTTGGAAACCTGGTCAATATCCCCAAGATTG
CGCGGGATGACAACAACCTGTCAAAGGGCTATGGATTTGTGTCGTTCGCC
GACTTTGAGTCTTCGGACGCGGCCATAACCAACATGAACGGCCAATATCT
TATGAACAAGCAGGTCTCCGTGCAATACGCCTATAAGAAAGATGGGAAAG
GTGAACGCCACGGTGATGAAGCAGAACGAATGCTGGCTGCACAAGCTCGC
AAACATAACGTGCGCCCACCAACCCAGCCGCTACCTCCACAATTCTCAAA
CCCAGGGACACCTATGGTGCCAGCTGCGATGGCCAACGGTGATAGCTCTC
GGCCAATGAGTACTAATCCACCAGACCTAAATATGGGCAGAGGTATGGCT
CCTCCGAATGTACCGTTCCAAAACGTACCTCCTCCACAAGCAAGCCGACC
CGTTCCACCTACATCTCTGGCGAACCCACCCCCAGGTTTACCAGCACGGC
CGCCACCTTCTCAGGCCGGATATGGCGGGCCGCAGTCCTTCCTCCCACCA
GGATTCAATGGTGCTGGTCAACAACCTCCCTTCCCTCAAGCAGCACCTCC
GCCAGGCTTTGCTCCACCGGGGTTCGGTTCACCGGCAGGAACACCTGGTC
CCCCACCTCCGTTGCCCCCGGGATTCCAGCAACCTGGCTATGCGCGCGGG
CGTTGAATGTCTGGCGCAAGGCATTGGGAGCAAGACAAAGAGGCCACCGT
CTACATCGGAAACCTCGATGAACGGGTTACAGATAGCCTGGTATGGGAGC
TGATGCTGCAGGCCGGGCGCATCGTTAACGTTCACCTACCGAAAGACCGA
GTCACACAGTCGCATCAGGGCTATGGGTTCGTGGAATTCATCAGCGAGGA
AGATGCCGAATACGCGTCACGAATCATGAACGGAATCCGCCTGTATGGAA
AGCCCATCCGCGTCAACAAAGCATCCGCCGACAAGCAAAAGTCGGTGGAG
ATTGGGGCAGAGCTATTCGTCGGCAATCTTGATCCTATGGTTACGGAGCA
AGTTCTTTATGACACATTCAGCCGCTTTGGAAACCTGGTCAATATCCCCA
AGATTGCGCGGGATGACAACAACCTGTCAAAGGGCTATGGATTTGTGTCG
TTCGCCGACTTTGAGTCTTCGGACGCGGCCATAACCAACATGAACGGCCA
ATATCTTATGAACAAGCAGGTCTCCGTGCAATACGCCTATAAGAAAGATG
GGAAAGGTGAACGCCACGGTGATGAAGCAGAACGAATGCTGGCTGCACAA
GCTCGCAAACATAACGTGCGCCCACCAACCCAGCCGCTACCTCCACAATT
CTCAAACCCAGGGACACCTATGGTGCCAGCTGCGATGGCCAACGGTGATA
GCTCTCGGCCAATGAGTACTAATCCACCAGACCTAAATATGGGCAGAGGT
ATGGCTCCTCCGAATGTACCGTTCCAAAACGTACCTCCTCCACAAGCAAG
CCGACCCGTTCCACCTACATCTCTGGCGAACCCACCCCCAGGTTTACCAG
CACGGCCGCCACCTTCTCAGGCCGGATATGGCGGGCCGCAGTCCTTCCTC
CCACCAGGATTCAATGGTGCTGGTCAACAACCTCCCTTCCCTCAAGCAGC
ACCTCCGCCAGGCTTTGCTCCACCGGGGTTCGGTTCACCGGCAGGAACAC
CTGGTCCCCCACCTCCGTTGCCCCCGGGATTCCAGCAACCTGGCTATGCG
CGCGGGCGTTGAATGTCTGGCGCAAGGCATTGGGAGCAAGACAAAGAGGC
CACCGTCTACATCGGAAACCTCGATGAACGGGTTACAGATAGCCTGGTAT
GGGAGCTGATGCTGCAGGCCGGGCGCATCGTTAACGTTCACCTACCGAAA
GACCGAGTCACACAGTCGCATCAGGGCTATGGGTTCGTGGAATTCATCAG
CGAGGAAGATGCCGAATACGCGTCACGAATCATGAACGGAATCCGCCTGT
ATGGAAAGCCCATCCGCGTCAACAAAGCATCCGCCGACAAGCAAAAGTCG
GTGGAGATTGGGGCAGAGCTATTCGTCGGCAATCTTGATCCTATGGTTAC
GGAGCAAGTTCTTTATGACACATTCAGCCGCTTTGGAAACCTGGTCAATA
TCCCCAAGATTGCGCGGGATGACAACAACCTGTCAAAGGGCTATGGATTT
GTGTCGTTCGCCGACTTTGAGTCTTCGGACGCGGCCATAACCAACATGAA
CGGCCAATATCTTATGAACAAGCAGGTCTCCGTGCAATACGCCTATAAGA
AAGATGGGAAAGGTGAACGCCACGGTGATGAAGCAGAACGAATGCTGGCT
GCACAAGCTCGCAAACATAACGTGCGCCCACCAACCCAGCCGCTACCTCC
ACAATTCTCAAACCCAGGGACACCTATGGTGCCAGCTGCGATGGCCAACG
GTGATAGCTCTCGGCCAATGAGTACTAATCCACCAGACCTAAATATGGGC
AGAGGTATGGCTCCTCCGAATGTACCGTTCCAAAACGTACCTCCTCCACA
AGCAAGCCGACCCGTTCCACCTACATCTCTGGCGAACCCACCCCCAGGTT
TACCAGCACGGCCGCCACCTTCTCAGGCCGGATATGGCGGGCCGCAGTCC
TTCCTCCCACCAGGATTCAATGGTGCTGGTCAACAACCTCCCTTCCCTCA
AGCAGCACCTCCGCCAGGCTTTGCTCCACCGGGGTTCGGTTCACCGGCAG
GAACACCTGGTCCCCCACCTCCGTTGCCCCCGGGATTCCAGCAACCTGGC
TATGCGCGCGGGCGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_32720ATCC64974_32720Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_32720-T1.exon1ATCC64974_32720-T1.exon1Aspergillus niger N402exon
ATCC64974_32720-T1.exon2ATCC64974_32720-T1.exon2Aspergillus niger N402exon
ATCC64974_32720-T1.exon3ATCC64974_32720-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_32720-T1.cdsATCC64974_32720-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_32720-T1ATCC64974_32720-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR034158
DBxrefInterPro:IPR034159
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF13893
DBxrefPFAM:PF00076
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:1889271..1890475 +
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