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ATCC64974_32900-T1, ATCC64974_32900-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_32900-T1
Unique NameATCC64974_32900-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:2017228..2018036+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_32900-T1 ID=ATCC64974_32900-T1|Name=ATCC64974_32900-T1|organism=Aspergillus niger N402|type=mRNA|length=809bp|location=Sequence derived from alignment at OGUI01000004.1:2017228..2018036+ (Aspergillus niger N402)
ATGGGTATGTTCAAATCGACGTGGTGATATATTCATTTGCTGAAGAATCT
CGCGGGTTGCGACTTTTTTTTTTTGGCTCAACACCATGGACATTTCCTGT
TTTCACTTGGCAAATACTGATTTTGGGATACAGGTATCGACTTGGACCGC
CACCATGTGCGCGGCACCCATCGCAAGGCGCCCAAGAGCGAGAACGTCTA
CCTGCAAGTCTTGGTGAAGCTCTACCGATTCCTCGCCCGTATGTCTCCGT
CTTCTGAGTGCAGCCGATTTCAGCAATGGGAAACTGATTGGTGGTGGTAT
TTTTACAGGTCGTACGGAATCCAACTTCAACAAGGTCGTCTTGCGCCGCC
TTTTCATGTCCAGGATCAATCGCCCCCCCGTTTCGCTCTCGCGCATTGTA
TCCAATGTGACCGACTCCCACAAGGGCAAGACTATCGTTGTGATCGGCAC
CATCACTGACGACAACCGTCTTCTGACTGTCCCGAAGCTGTCTATTGCAG
CACTTCGTTTCACGGCTACTGCTCGGGCCAGGATTGAGAAGGCTGGTGGT
GAGGTCTTGACTTTGGACCAGCTCGCTCTGCGTGCCCCTACTGGAGCAAA
CACTCTCCTTCTCCGCGGACCTAAGAATGCTCGGGAGGCAGTGAAGCACT
TCGGTTTCGGCCCCCACAGCCACAAGGCATGTTATATACTCTTCGCGCAA
TATATGGTTTGCATAACTAACCTTGAAACAGAAACCCTACGTTCGCAGCA
AGGGACGTAAGTTCGAGAGAGCCCGTGGACGCAGAAGGTCTCGCGGTTTC
AAGGTGTAA
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Coding sequence (CDS) from alignment at OGUI01000004.1:2017228..2018036+

>ATCC64974_32900-T1 ID=ATCC64974_32900-T1|Name=ATCC64974_32900-T1|organism=Aspergillus niger N402|type=CDS|length=2220bp|location=Sequence derived from alignment at OGUI01000004.1:2017228..2018036+ (Aspergillus niger N402)
ATGGGTATCGACTTGGACCGCCACCATGTGCGCGGCACCCATCGCAAGGC
GCCCAAGAGCGAGAACGTCTACCTGCAAGTCTTGGTGAAGCTCTACCGAT
TCCTCGCCCGTCGTACGGAATCCAACTTCAACAAGGTCGTCTTGCGCCGC
CTTTTCATGTCCAGGATCAATCGCCCCCCCGTTTCGCTCTCGCGCATTGT
ATCCAATGTGACCGACTCCCACAAGGGCAAGACTATCGTTGTGATCGGCA
CCATCACTGACGACAACCGTCTTCTGACTGTCCCGAAGCTGTCTATTGCA
GCACTTCGTTTCACGGCTACTGCTCGGGCCAGGATTGAGAAGGCTGGTGG
TGAGGTCTTGACTTTGGACCAGCTCGCTCTGCGTGCCCCTACTGGAGCAA
ACACTCTCCTTCTCCGCGGACCTAAGAATGCTCGGGAGGCAGTGAAGCAC
TTCGGTTTCGGCCCCCACAGCCACAAGAAACCCTACGTTCGCAGCAAGGG
ACGTAAGTTCGAGAGAGCCCGTGGACGCAGAAGGTCTCGCGGTTTCAAGG
TGTAAATGGGTATCGACTTGGACCGCCACCATGTGCGCGGCACCCATCGC
AAGGCGCCCAAGAGCGAGAACGTCTACCTGCAAGTCTTGGTGAAGCTCTA
CCGATTCCTCGCCCGTCGTACGGAATCCAACTTCAACAAGGTCGTCTTGC
GCCGCCTTTTCATGTCCAGGATCAATCGCCCCCCCGTTTCGCTCTCGCGC
ATTGTATCCAATGTGACCGACTCCCACAAGGGCAAGACTATCGTTGTGAT
CGGCACCATCACTGACGACAACCGTCTTCTGACTGTCCCGAAGCTGTCTA
TTGCAGCACTTCGTTTCACGGCTACTGCTCGGGCCAGGATTGAGAAGGCT
GGTGGTGAGGTCTTGACTTTGGACCAGCTCGCTCTGCGTGCCCCTACTGG
AGCAAACACTCTCCTTCTCCGCGGACCTAAGAATGCTCGGGAGGCAGTGA
AGCACTTCGGTTTCGGCCCCCACAGCCACAAGAAACCCTACGTTCGCAGC
AAGGGACGTAAGTTCGAGAGAGCCCGTGGACGCAGAAGGTCTCGCGGTTT
CAAGGTGTAAATGGGTATCGACTTGGACCGCCACCATGTGCGCGGCACCC
ATCGCAAGGCGCCCAAGAGCGAGAACGTCTACCTGCAAGTCTTGGTGAAG
CTCTACCGATTCCTCGCCCGTCGTACGGAATCCAACTTCAACAAGGTCGT
CTTGCGCCGCCTTTTCATGTCCAGGATCAATCGCCCCCCCGTTTCGCTCT
CGCGCATTGTATCCAATGTGACCGACTCCCACAAGGGCAAGACTATCGTT
GTGATCGGCACCATCACTGACGACAACCGTCTTCTGACTGTCCCGAAGCT
GTCTATTGCAGCACTTCGTTTCACGGCTACTGCTCGGGCCAGGATTGAGA
AGGCTGGTGGTGAGGTCTTGACTTTGGACCAGCTCGCTCTGCGTGCCCCT
ACTGGAGCAAACACTCTCCTTCTCCGCGGACCTAAGAATGCTCGGGAGGC
AGTGAAGCACTTCGGTTTCGGCCCCCACAGCCACAAGAAACCCTACGTTC
GCAGCAAGGGACGTAAGTTCGAGAGAGCCCGTGGACGCAGAAGGTCTCGC
GGTTTCAAGGTGTAAATGGGTATCGACTTGGACCGCCACCATGTGCGCGG
CACCCATCGCAAGGCGCCCAAGAGCGAGAACGTCTACCTGCAAGTCTTGG
TGAAGCTCTACCGATTCCTCGCCCGTCGTACGGAATCCAACTTCAACAAG
GTCGTCTTGCGCCGCCTTTTCATGTCCAGGATCAATCGCCCCCCCGTTTC
GCTCTCGCGCATTGTATCCAATGTGACCGACTCCCACAAGGGCAAGACTA
TCGTTGTGATCGGCACCATCACTGACGACAACCGTCTTCTGACTGTCCCG
AAGCTGTCTATTGCAGCACTTCGTTTCACGGCTACTGCTCGGGCCAGGAT
TGAGAAGGCTGGTGGTGAGGTCTTGACTTTGGACCAGCTCGCTCTGCGTG
CCCCTACTGGAGCAAACACTCTCCTTCTCCGCGGACCTAAGAATGCTCGG
GAGGCAGTGAAGCACTTCGGTTTCGGCCCCCACAGCCACAAGAAACCCTA
CGTTCGCAGCAAGGGACGTAAGTTCGAGAGAGCCCGTGGACGCAGAAGGT
CTCGCGGTTTCAAGGTGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_32900ATCC64974_32900Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_32900-T1.exon1ATCC64974_32900-T1.exon1Aspergillus niger N402exon
ATCC64974_32900-T1.exon2ATCC64974_32900-T1.exon2Aspergillus niger N402exon
ATCC64974_32900-T1.exon3ATCC64974_32900-T1.exon3Aspergillus niger N402exon
ATCC64974_32900-T1.exon4ATCC64974_32900-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_32900-T1.cdsATCC64974_32900-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_32900-T1ATCC64974_32900-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036227
DBxrefInterPro:IPR021132
DBxrefInterPro:IPR021131
DBxrefPFAM:PF00828
DBxrefPFAM:PF17135
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:2017228..2018036 +
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