You are here

Home

ATCC64974_32970-T1, ATCC64974_32970-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_32970-T1
Unique NameATCC64974_32970-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:2037472..2038027+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_32970-T1 ID=ATCC64974_32970-T1|Name=ATCC64974_32970-T1|organism=Aspergillus niger N402|type=mRNA|length=556bp|location=Sequence derived from alignment at OGUI01000004.1:2037472..2038027+ (Aspergillus niger N402)
ATGTCTTTCAGGGCCAGAAAGCGCGTACCAGACTCTGAGAGTGATTTCGT
CGACGGCTATCGGTCATCAAAAAGGACAAGGGGAGATGTCTCGAAGGAAA
ACACAGACTCTCGTCATTCTGATTCAGTTGCTGGCCAGGGGAAGCTTGAC
TCGAATGGAGACCTTTATTGGGAAATCTCCAAAGCACGCCGTGTGACCAT
CTCATCTTTCCGTGGAAAGACCTTGGTCAATATAAGGGAATATTACGAGA
AGGATGGCCACGAGCTCCCTGGGAAGAAGGTTGGTTCCCTTTTTATACTA
AAAGGCTTTGCTACGAAACTCATCGTTTGCGCAGGGGATCTCTTTGCCAA
TTGATCAGTTTTCCTCTCTTGTGAGCTTACTACCTCATATTGAAACCACT
CTTCAGGATAAAGGAGAATCAATCCCCCGGCCACAGTATGATAGTGATAG
TAAAATCAACAGTGAGAATAAAGAGGCCGGTGATGACTCCGTTGATGTTT
CGGATGAGGATACGCGCCGGAATATCGAAGCGACAAGTGAGGACGATAGC
GAGTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000004.1:2037472..2038027+

>ATCC64974_32970-T1 ID=ATCC64974_32970-T1|Name=ATCC64974_32970-T1|organism=Aspergillus niger N402|type=CDS|length=1002bp|location=Sequence derived from alignment at OGUI01000004.1:2037472..2038027+ (Aspergillus niger N402)
ATGTCTTTCAGGGCCAGAAAGCGCGTACCAGACTCTGAGAGTGATTTCGT
CGACGGCTATCGGTCATCAAAAAGGACAAGGGGAGATGTCTCGAAGGAAA
ACACAGACTCTCGTCATTCTGATTCAGTTGCTGGCCAGGGGAAGCTTGAC
TCGAATGGAGACCTTTATTGGGAAATCTCCAAAGCACGCCGTGTGACCAT
CTCATCTTTCCGTGGAAAGACCTTGGTCAATATAAGGGAATATTACGAGA
AGGATGGCCACGAGCTCCCTGGGAAGAAGGGGATCTCTTTGCCAATTGAT
CAGTTTTCCTCTCTTGTGAGCTTACTACCTCATATTGAAACCACTCTTCA
GGATAAAGGAGAATCAATCCCCCGGCCACAGTATGATAGTGATAGTAAAA
TCAACAGTGAGAATAAAGAGGCCGGTGATGACTCCGTTGATGTTTCGGAT
GAGGATACGCGCCGGAATATCGAAGCGACAAGTGAGGACGATAGCGAGTA
GATGTCTTTCAGGGCCAGAAAGCGCGTACCAGACTCTGAGAGTGATTTCG
TCGACGGCTATCGGTCATCAAAAAGGACAAGGGGAGATGTCTCGAAGGAA
AACACAGACTCTCGTCATTCTGATTCAGTTGCTGGCCAGGGGAAGCTTGA
CTCGAATGGAGACCTTTATTGGGAAATCTCCAAAGCACGCCGTGTGACCA
TCTCATCTTTCCGTGGAAAGACCTTGGTCAATATAAGGGAATATTACGAG
AAGGATGGCCACGAGCTCCCTGGGAAGAAGGGGATCTCTTTGCCAATTGA
TCAGTTTTCCTCTCTTGTGAGCTTACTACCTCATATTGAAACCACTCTTC
AGGATAAAGGAGAATCAATCCCCCGGCCACAGTATGATAGTGATAGTAAA
ATCAACAGTGAGAATAAAGAGGCCGGTGATGACTCCGTTGATGTTTCGGA
TGAGGATACGCGCCGGAATATCGAAGCGACAAGTGAGGACGATAGCGAGT
AG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_32970ATCC64974_32970Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_32970-T1.exon1ATCC64974_32970-T1.exon1Aspergillus niger N402exon
ATCC64974_32970-T1.exon2ATCC64974_32970-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_32970-T1.cdsATCC64974_32970-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_32970-T1ATCC64974_32970-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR009044
DBxrefInterPro:IPR003173
DBxrefPFAM:PF02229
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:2037472..2038027 +
Powered by Drupal