You are here

Home

ATCC64974_330-T1, ATCC64974_330-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_330-T1
Unique NameATCC64974_330-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000001.1:138680..140314-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_330-T1 ID=ATCC64974_330-T1|Name=ATCC64974_330-T1|organism=Aspergillus niger N402|type=mRNA|length=1635bp|location=Sequence derived from alignment at OGUI01000001.1:138680..140314- (Aspergillus niger N402)
ATGCAGTCCCCCGACAGGTATCATCGCATTTTAGACCTACTGAACCCCCA
TGAATGGCGCGATGTACAAAAGCGCATCAACCAGCGCTCCTTTCAAAAAG
ATATTCTAGCGGAATTGCCTCCAGAAATCGCAGTCCAAATCGCTCAGTAT
CTTGACCTTTCTGACCTCTTTATCCTTCAAAGGGTATGTTCCCATCCTTC
GTGGTCTTGGGGAAAAAAAATGACCTGCCACCCTTATAACCCGTGAGACT
GAGTTCAAGCCACATTCCACCAGGTCTCTAGAAAGTGGCTCCAGCTACTG
TCCTCGGAACTGATCCAGGGTGCTGTATACCAACAATACACAGGGCATGT
GGGCGCAGCAGCACATGTCCTAACTAATCACTTCACCCAGTATGCCAAGT
ATAGAATCCGTCTGGAGCGTGGCCTACCCATTTGCAATCTCCAGGCCCCC
AACCTCTTCCCAACAGATGGCTCGAAGCTTGAATGCTTGGATTACGCCAG
TGGAAGGTGTGCTTGGCTAGATAACGGCACCCATGTCGTCGTGCACGATC
TCTGCAAGCGCTCCACCCAGCGTTTTTGCACGGAGAATCGAGATTCGTTC
TGGGATTTGCGTCTCTCCGATTCCATGGTGGTTGCGATCAGCGCGCGTGC
GTAAGTACACATAATACTCACACCACCACAACTTGTCACGGCTGCGTCGA
GAAAGGAACATATTAGACACCCAGCTCATCCCGAGTCTAGATACTGCCAC
GCCTGGAACCTTGAAACGGAAGAACACGCCTCGTTTCGCATCCCCGCTTT
CAGCTTTCGGGCCTTCGTTGTTACTGGTCTCAAGGTTGCTCTGAGTTTCA
TCAACCATTCTGCAGCTGGTGACGAGGAGTCCAAGATCTATTACTGGGAC
ATGAGCTCGCGAACTGCTCGTACCATCCAAATAGCACCCCATCTGGCATT
GATAGGCCTGCAACCCACCACCAACAGTGTGACCACTCTCCTCCTCGAAA
GAGGAGATGATCCCACGAACCCCCACCATTCGCCCTGGGACAGACTACGT
GTCGTAAAACACACCTTCGATGATCACGGACGCACCACCAGTCCACTACC
CTCCTATACATTACATTTACCGTTCCCTATTCAGCCTGGCTGGACTATTG
CCGACATATCAGACAGCTCTACAAACAACTTAGCCGTCTTTAACTGCACC
CCGCCGCCTCAACCCAGTGCGCTGTCGGCGACGACGACAACGACCACCCT
TCACTATGTTCTTGTAGTCTCCTATGACCCGCAGCGGGACCAGATTCACG
TGCACACACTGCCCCAGGAAGAAGGCACACCTTATTTTCCCTTTTGCAAG
ACCGCGCTGGATAGTGATCTTCTCTACTACGTAAAGAGTGATAGGGGGAA
ACCGGCCATTTGGATCTCCAGTCCAGCCTCCCGCATCCCTCATCGCCCGG
CTGAATCCATGAGTCTCGGGTTGCCTCGAGAAGCCTCGAATGCCATCTAT
ACGTATGCGAACATGTTCACTCTCTACGGCGATCGCGACTTTGTTCTCCT
GGTCCACGAGACCGATGTGAAAGTGTGGCGGTTTAAAGACACACAACCTC
CAGAGTCTGTCAATCTGGCGCTTCTAGCAGCATGA
back to top

Coding sequence (CDS) from alignment at OGUI01000001.1:138680..140314-

>ATCC64974_330-T1 ID=ATCC64974_330-T1|Name=ATCC64974_330-T1|organism=Aspergillus niger N402|type=CDS|length=4014bp|location=Sequence derived from alignment at OGUI01000001.1:138680..140314- (Aspergillus niger N402)
ATACTGCCACGCCTGGAACCTTGAAACGGAAGAACACGCCTCGTTTCGCA
TCCCCGCTTTCAGCTTTCGGGCCTTCGTTGTTACTGGTCTCAAGGTTGCT
CTGAGTTTCATCAACCATTCTGCAGCTGGTGACGAGGAGTCCAAGATCTA
TTACTGGGACATGAGCTCGCGAACTGCTCGTACCATCCAAATAGCACCCC
ATCTGGCATTGATAGGCCTGCAACCCACCACCAACAGTGTGACCACTCTC
CTCCTCGAAAGAGGAGATGATCCCACGAACCCCCACCATTCGCCCTGGGA
CAGACTACGTGTCGTAAAACACACCTTCGATGATCACGGACGCACCACCA
GTCCACTACCCTCCTATACATTACATTTACCGTTCCCTATTCAGCCTGGC
TGGACTATTGCCGACATATCAGACAGCTCTACAAACAACTTAGCCGTCTT
TAACTGCACCCCGCCGCCTCAACCCAGTGCGCTGTCGGCGACGACGACAA
CGACCACCCTTCACTATGTTCTTGTAGTCTCCTATGACCCGCAGCGGGAC
CAGATTCACGTGCACACACTGCCCCAGGAAGAAGGCACACCTTATTTTCC
CTTTTGCAAGACCGCGCTGGATAGTGATCTTCTCTACTACGTAAAGAGTG
ATAGGGGGAAACCGGCCATTTGGATCTCCAGTCCAGCCTCCCGCATCCCT
CATCGCCCGGCTGAATCCATGAGTCTCGGGTTGCCTCGAGAAGCCTCGAA
TGCCATCTATACGTATGCGAACATGTTCACTCTCTACGGCGATCGCGACT
TTGTTCTCCTGGTCCACGAGACCGATGTGAAAGTGTGGCGGTTTAAAGAC
ACACAACCTCCAGAGTCTGTCAATCTGGCGCTTCTAGCAGCATGATATGC
CAAGTATAGAATCCGTCTGGAGCGTGGCCTACCCATTTGCAATCTCCAGG
CCCCCAACCTCTTCCCAACAGATGGCTCGAAGCTTGAATGCTTGGATTAC
GCCAGTGGAAGGTGTGCTTGGCTAGATAACGGCACCCATGTCGTCGTGCA
CGATCTCTGCAAGCGCTCCACCCAGCGTTTTTGCACGGAGAATCGAGATT
CGTTCTGGGATTTGCGTCTCTCCGATTCCATGGTGGTTGCGATCAGCGCG
CGTGCATGCAGTCCCCCGACAGGTATCATCGCATTTTAGACCTACTGAAC
CCCCATGAATGGCGCGATGTACAAAAGCGCATCAACCAGCGCTCCTTTCA
AAAAGATATTCTAGCGGAATTGCCTCCAGAAATCGCAGTCCAAATCGCTC
AGTATCTTGACCTTTCTGACCTCTTTATCCTTCAAAGGATACTGCCACGC
CTGGAACCTTGAAACGGAAGAACACGCCTCGTTTCGCATCCCCGCTTTCA
GCTTTCGGGCCTTCGTTGTTACTGGTCTCAAGGTTGCTCTGAGTTTCATC
AACCATTCTGCAGCTGGTGACGAGGAGTCCAAGATCTATTACTGGGACAT
GAGCTCGCGAACTGCTCGTACCATCCAAATAGCACCCCATCTGGCATTGA
TAGGCCTGCAACCCACCACCAACAGTGTGACCACTCTCCTCCTCGAAAGA
GGAGATGATCCCACGAACCCCCACCATTCGCCCTGGGACAGACTACGTGT
CGTAAAACACACCTTCGATGATCACGGACGCACCACCAGTCCACTACCCT
CCTATACATTACATTTACCGTTCCCTATTCAGCCTGGCTGGACTATTGCC
GACATATCAGACAGCTCTACAAACAACTTAGCCGTCTTTAACTGCACCCC
GCCGCCTCAACCCAGTGCGCTGTCGGCGACGACGACAACGACCACCCTTC
ACTATGTTCTTGTAGTCTCCTATGACCCGCAGCGGGACCAGATTCACGTG
CACACACTGCCCCAGGAAGAAGGCACACCTTATTTTCCCTTTTGCAAGAC
CGCGCTGGATAGTGATCTTCTCTACTACGTAAAGAGTGATAGGGGGAAAC
CGGCCATTTGGATCTCCAGTCCAGCCTCCCGCATCCCTCATCGCCCGGCT
GAATCCATGAGTCTCGGGTTGCCTCGAGAAGCCTCGAATGCCATCTATAC
GTATGCGAACATGTTCACTCTCTACGGCGATCGCGACTTTGTTCTCCTGG
TCCACGAGACCGATGTGAAAGTGTGGCGGTTTAAAGACACACAACCTCCA
GAGTCTGTCAATCTGGCGCTTCTAGCAGCATGATATGCCAAGTATAGAAT
CCGTCTGGAGCGTGGCCTACCCATTTGCAATCTCCAGGCCCCCAACCTCT
TCCCAACAGATGGCTCGAAGCTTGAATGCTTGGATTACGCCAGTGGAAGG
TGTGCTTGGCTAGATAACGGCACCCATGTCGTCGTGCACGATCTCTGCAA
GCGCTCCACCCAGCGTTTTTGCACGGAGAATCGAGATTCGTTCTGGGATT
TGCGTCTCTCCGATTCCATGGTGGTTGCGATCAGCGCGCGTGCATGCAGT
CCCCCGACAGGTATCATCGCATTTTAGACCTACTGAACCCCCATGAATGG
CGCGATGTACAAAAGCGCATCAACCAGCGCTCCTTTCAAAAAGATATTCT
AGCGGAATTGCCTCCAGAAATCGCAGTCCAAATCGCTCAGTATCTTGACC
TTTCTGACCTCTTTATCCTTCAAAGGATACTGCCACGCCTGGAACCTTGA
AACGGAAGAACACGCCTCGTTTCGCATCCCCGCTTTCAGCTTTCGGGCCT
TCGTTGTTACTGGTCTCAAGGTTGCTCTGAGTTTCATCAACCATTCTGCA
GCTGGTGACGAGGAGTCCAAGATCTATTACTGGGACATGAGCTCGCGAAC
TGCTCGTACCATCCAAATAGCACCCCATCTGGCATTGATAGGCCTGCAAC
CCACCACCAACAGTGTGACCACTCTCCTCCTCGAAAGAGGAGATGATCCC
ACGAACCCCCACCATTCGCCCTGGGACAGACTACGTGTCGTAAAACACAC
CTTCGATGATCACGGACGCACCACCAGTCCACTACCCTCCTATACATTAC
ATTTACCGTTCCCTATTCAGCCTGGCTGGACTATTGCCGACATATCAGAC
AGCTCTACAAACAACTTAGCCGTCTTTAACTGCACCCCGCCGCCTCAACC
CAGTGCGCTGTCGGCGACGACGACAACGACCACCCTTCACTATGTTCTTG
TAGTCTCCTATGACCCGCAGCGGGACCAGATTCACGTGCACACACTGCCC
CAGGAAGAAGGCACACCTTATTTTCCCTTTTGCAAGACCGCGCTGGATAG
TGATCTTCTCTACTACGTAAAGAGTGATAGGGGGAAACCGGCCATTTGGA
TCTCCAGTCCAGCCTCCCGCATCCCTCATCGCCCGGCTGAATCCATGAGT
CTCGGGTTGCCTCGAGAAGCCTCGAATGCCATCTATACGTATGCGAACAT
GTTCACTCTCTACGGCGATCGCGACTTTGTTCTCCTGGTCCACGAGACCG
ATGTGAAAGTGTGGCGGTTTAAAGACACACAACCTCCAGAGTCTGTCAAT
CTGGCGCTTCTAGCAGCATGATATGCCAAGTATAGAATCCGTCTGGAGCG
TGGCCTACCCATTTGCAATCTCCAGGCCCCCAACCTCTTCCCAACAGATG
GCTCGAAGCTTGAATGCTTGGATTACGCCAGTGGAAGGTGTGCTTGGCTA
GATAACGGCACCCATGTCGTCGTGCACGATCTCTGCAAGCGCTCCACCCA
GCGTTTTTGCACGGAGAATCGAGATTCGTTCTGGGATTTGCGTCTCTCCG
ATTCCATGGTGGTTGCGATCAGCGCGCGTGCATGCAGTCCCCCGACAGGT
ATCATCGCATTTTAGACCTACTGAACCCCCATGAATGGCGCGATGTACAA
AAGCGCATCAACCAGCGCTCCTTTCAAAAAGATATTCTAGCGGAATTGCC
TCCAGAAATCGCAGTCCAAATCGCTCAGTATCTTGACCTTTCTGACCTCT
TTATCCTTCAAAGG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_330ATCC64974_330Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_330-T1ATCC64974_330-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_330-T1.cdsATCC64974_330-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_330-T1.exon3ATCC64974_330-T1.exon3Aspergillus niger N402exon
ATCC64974_330-T1.exon2ATCC64974_330-T1.exon2Aspergillus niger N402exon
ATCC64974_330-T1.exon1ATCC64974_330-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR001810
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000001.1supercontigOGUI01000001.1:138680..140314 -
Powered by Drupal