You are here

Home

ATCC64974_33290-T1, ATCC64974_33290-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_33290-T1
Unique NameATCC64974_33290-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000005.1:72914..73693-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_33290-T1 ID=ATCC64974_33290-T1|Name=ATCC64974_33290-T1|organism=Aspergillus niger N402|type=mRNA|length=780bp|location=Sequence derived from alignment at OGUI01000005.1:72914..73693- (Aspergillus niger N402)
ATGGAAAACAAACTTTCAACGCAGGATGTCATTCTTCAGAAGTTATATGG
TCATACGTGCGTTATACCTGATCTACGGTCGTTTATGAAGAGTGAATCGG
AGGGCATAAATAAACACCGAACGTTGTTACCGCTATGCGTTCATGACTAT
ATAGATAGGTATGTGTCTAGCGTCCCCCACAGATAACCTGACCCCCCAGT
CAAGCTGATGCCAGTGAGTCCCTCAGCCTCTTACCAGAAGATCCAGCCAA
GGCGCAAAAAGTGAAAGGTGCCGATTTTTCACTACTAGCCTGCCTTTGGT
GGCCCCATGCATCATTCAGGAAGCTGCGTGTGTTGGCGTTTCTCGTTGTA
TGGTTGATTGTCTGGGACGATGAACTGGACGGTGCCTCCCAGTTTACGGC
GTACGACCTGAATATGGGTCAGCGATTTCGGGATGAAACACGTTGGTTTG
TCAAAGCTAGTCTGGGATTGGAGTCAGAAGATCCCAACAACGTTACCGAA
AGTGCTATCATTCGAGGGTTTAGTCCGATAGCAGATTTTATCCGAGAGGA
ATATGATGAAGGTAGGTGAGCGTATTTGGAAAAACAAGACATACGTACGG
GGATGCTAACACTGTATAGAACATAGGCTTACGCTGACGGAAGAGATCAT
TTTTGTTATCCACATGTCCAAGGTGGAACAGGAAAATCGCCTTGGGATAG
ACATACCTTCAACCGATCAATATCTTGCATATCGGCTTGGAACAAATCTG
ATGGGCGTGATCTGCGCTGCAACAGAGTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000005.1:72914..73693-

>ATCC64974_33290-T1 ID=ATCC64974_33290-T1|Name=ATCC64974_33290-T1|organism=Aspergillus niger N402|type=CDS|length=1737bp|location=Sequence derived from alignment at OGUI01000005.1:72914..73693- (Aspergillus niger N402)
AACATAGGCTTACGCTGACGGAAGAGATCATTTTTGTTATCCACATGTCC
AAGGTGGAACAGGAAAATCGCCTTGGGATAGACATACCTTCAACCGATCA
ATATCTTGCATATCGGCTTGGAACAAATCTGATGGGCGTGATCTGCGCTG
CAACAGAGTAATCAAGCTGATGCCAGTGAGTCCCTCAGCCTCTTACCAGA
AGATCCAGCCAAGGCGCAAAAAGTGAAAGGTGCCGATTTTTCACTACTAG
CCTGCCTTTGGTGGCCCCATGCATCATTCAGGAAGCTGCGTGTGTTGGCG
TTTCTCGTTGTATGGTTGATTGTCTGGGACGATGAACTGGACGGTGCCTC
CCAGTTTACGGCGTACGACCTGAATATGGGTCAGCGATTTCGGGATGAAA
CACGTTGGTTTGTCAAAGCTAGTCTGGGATTGGAGTCAGAAGATCCCAAC
AACGTTACCGAAAGTGCTATCATTCGAGGGTTTAGTCCGATAGCAGATTT
TATCCGAGAGGAATATGATGAAGATGGAAAACAAACTTTCAACGCAGGAT
GTCATTCTTCAGAAGTTATATGGTCATACAACATAGGCTTACGCTGACGG
AAGAGATCATTTTTGTTATCCACATGTCCAAGGTGGAACAGGAAAATCGC
CTTGGGATAGACATACCTTCAACCGATCAATATCTTGCATATCGGCTTGG
AACAAATCTGATGGGCGTGATCTGCGCTGCAACAGAGTAATCAAGCTGAT
GCCAGTGAGTCCCTCAGCCTCTTACCAGAAGATCCAGCCAAGGCGCAAAA
AGTGAAAGGTGCCGATTTTTCACTACTAGCCTGCCTTTGGTGGCCCCATG
CATCATTCAGGAAGCTGCGTGTGTTGGCGTTTCTCGTTGTATGGTTGATT
GTCTGGGACGATGAACTGGACGGTGCCTCCCAGTTTACGGCGTACGACCT
GAATATGGGTCAGCGATTTCGGGATGAAACACGTTGGTTTGTCAAAGCTA
GTCTGGGATTGGAGTCAGAAGATCCCAACAACGTTACCGAAAGTGCTATC
ATTCGAGGGTTTAGTCCGATAGCAGATTTTATCCGAGAGGAATATGATGA
AGATGGAAAACAAACTTTCAACGCAGGATGTCATTCTTCAGAAGTTATAT
GGTCATACAACATAGGCTTACGCTGACGGAAGAGATCATTTTTGTTATCC
ACATGTCCAAGGTGGAACAGGAAAATCGCCTTGGGATAGACATACCTTCA
ACCGATCAATATCTTGCATATCGGCTTGGAACAAATCTGATGGGCGTGAT
CTGCGCTGCAACAGAGTAATCAAGCTGATGCCAGTGAGTCCCTCAGCCTC
TTACCAGAAGATCCAGCCAAGGCGCAAAAAGTGAAAGGTGCCGATTTTTC
ACTACTAGCCTGCCTTTGGTGGCCCCATGCATCATTCAGGAAGCTGCGTG
TGTTGGCGTTTCTCGTTGTATGGTTGATTGTCTGGGACGATGAACTGGAC
GGTGCCTCCCAGTTTACGGCGTACGACCTGAATATGGGTCAGCGATTTCG
GGATGAAACACGTTGGTTTGTCAAAGCTAGTCTGGGATTGGAGTCAGAAG
ATCCCAACAACGTTACCGAAAGTGCTATCATTCGAGGGTTTAGTCCGATA
GCAGATTTTATCCGAGAGGAATATGATGAAGATGGAAAACAAACTTTCAA
CGCAGGATGTCATTCTTCAGAAGTTATATGGTCATAC
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_33290ATCC64974_33290Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_33290-T1ATCC64974_33290-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_33290-T1.cdsATCC64974_33290-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_33290-T1.exon3ATCC64974_33290-T1.exon3Aspergillus niger N402exon
ATCC64974_33290-T1.exon2ATCC64974_33290-T1.exon2Aspergillus niger N402exon
ATCC64974_33290-T1.exon1ATCC64974_33290-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000051.2
NoteEggNog:ENOG41
DBxrefInterPro:IPR008949
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000005.1supercontigOGUI01000005.1:72914..73693 -
Powered by Drupal