You are here

Home

ATCC64974_33650-T1, ATCC64974_33650-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_33650-T1
Unique NameATCC64974_33650-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000005.1:174414..175484-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_33650-T1 ID=ATCC64974_33650-T1|Name=ATCC64974_33650-T1|organism=Aspergillus niger N402|type=mRNA|length=1071bp|location=Sequence derived from alignment at OGUI01000005.1:174414..175484- (Aspergillus niger N402)
ATGGCTATCTTCAACGCATCTGACGTCAACCTTCACACGGCCAGCAAAGA
GGATGTGCTGTGCTACTATGCCATCTCTGAAAATGACTACAACGGTCATA
TGGGAGCCCGCATCTCCTCCATCTTCGTCATCCTCTTCGTCTCCACAGCC
TTCACTTTCTTCCCCGTTGTGGCTAAGAGCATGCCCCGCTGGAAGATTCC
TCACAACGTCTACATCTTCGCCCGCTACTTTGGTACGGGTGTCATCCTAG
CGACAGCCTTTATTCATCTGCTAGATCCGGCGTATAAGCGCATCGGACCC
AAGACCTGCGTTGGCGTTTCCGGCAATTGGTCCATATACTCCTGGTGTGC
GGGCATTGTCCTTGCTTCCATCACTCTGATCTTCCTTCTCGATCTCGCGG
CTGAGGTATACGTGGAAAACAAGTACGGCATGCACCGCGAGGAGAATGCC
ACGGATGCCTTTATTGCCGGTGATCCGACCAGCGCGCATGTTCACCCCAA
CCCCGAAGATGGTCGCATGTCGGCAGAGAAGACCTCCCCCACCGCAACCT
CTGCAGAAACCTCGTCGGAACAAAGCGAACGCTCCTTCAGGCAACAGATT
GCCGGTTTCTTGATCCTCGAGTTCGGTATCATCTTCCACTCGGTCATCAT
CGGGCTCAATCTTGGTGTGACCGGTTCCGAATTCGCGACCCTCTACCCCG
TGTTGGTCTTCCACCAGTCCTTCGAGGGCCTGGGTATCGGTGCCAGACTC
TCAGCCATCCCCTTCGGACATCGCAAGTGGCTCCCTCACCTGCTGTGTCT
GGCATATGGTCTGACCACTCCAATCTCGATCGCGATCGGCCTGGGACTGC
GCACCGCCTATAATCCGGGCTCGAAGACATCCTTAATCGTGCAGGGAGTG
TTCAATGCCATCTCAGCAGGAGTGCTGATCTACAGCGCCCTGGTGGAACT
GCTGGCCCGCGACTTCATCTTCGACCCGTGCCGCACTCGTCGTCGCTCGA
AGTTGCTGTACATGGTTTTCTGCACGTTGTTGGGGGCGGGCATCATGGCT
TTGATTGGAAAGTGGGCGTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000005.1:174414..175484-

>ATCC64974_33650-T1 ID=ATCC64974_33650-T1|Name=ATCC64974_33650-T1|organism=Aspergillus niger N402|type=CDS|length=1071bp|location=Sequence derived from alignment at OGUI01000005.1:174414..175484- (Aspergillus niger N402)
ATGGCTATCTTCAACGCATCTGACGTCAACCTTCACACGGCCAGCAAAGA
GGATGTGCTGTGCTACTATGCCATCTCTGAAAATGACTACAACGGTCATA
TGGGAGCCCGCATCTCCTCCATCTTCGTCATCCTCTTCGTCTCCACAGCC
TTCACTTTCTTCCCCGTTGTGGCTAAGAGCATGCCCCGCTGGAAGATTCC
TCACAACGTCTACATCTTCGCCCGCTACTTTGGTACGGGTGTCATCCTAG
CGACAGCCTTTATTCATCTGCTAGATCCGGCGTATAAGCGCATCGGACCC
AAGACCTGCGTTGGCGTTTCCGGCAATTGGTCCATATACTCCTGGTGTGC
GGGCATTGTCCTTGCTTCCATCACTCTGATCTTCCTTCTCGATCTCGCGG
CTGAGGTATACGTGGAAAACAAGTACGGCATGCACCGCGAGGAGAATGCC
ACGGATGCCTTTATTGCCGGTGATCCGACCAGCGCGCATGTTCACCCCAA
CCCCGAAGATGGTCGCATGTCGGCAGAGAAGACCTCCCCCACCGCAACCT
CTGCAGAAACCTCGTCGGAACAAAGCGAACGCTCCTTCAGGCAACAGATT
GCCGGTTTCTTGATCCTCGAGTTCGGTATCATCTTCCACTCGGTCATCAT
CGGGCTCAATCTTGGTGTGACCGGTTCCGAATTCGCGACCCTCTACCCCG
TGTTGGTCTTCCACCAGTCCTTCGAGGGCCTGGGTATCGGTGCCAGACTC
TCAGCCATCCCCTTCGGACATCGCAAGTGGCTCCCTCACCTGCTGTGTCT
GGCATATGGTCTGACCACTCCAATCTCGATCGCGATCGGCCTGGGACTGC
GCACCGCCTATAATCCGGGCTCGAAGACATCCTTAATCGTGCAGGGAGTG
TTCAATGCCATCTCAGCAGGAGTGCTGATCTACAGCGCCCTGGTGGAACT
GCTGGCCCGCGACTTCATCTTCGACCCGTGCCGCACTCGTCGTCGCTCGA
AGTTGCTGTACATGGTTTTCTGCACGTTGTTGGGGGCGGGCATCATGGCT
TTGATTGGAAAGTGGGCGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0046873metal ion transmembrane transporter activity
GO:0005385zinc ion transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0030001metal ion transport
GO:0055085transmembrane transport
GO:0071577zinc ion transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_33650ATCC64974_33650Aspergillus niger N402gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_33650-T1.cdsATCC64974_33650-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_33650-T1.exon1ATCC64974_33650-T1.exon1Aspergillus niger N402exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_33650-T1ATCC64974_33650-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR003689
DBxrefInterPro:IPR004698
DBxrefPFAM:PF02535
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000005.1supercontigOGUI01000005.1:174414..175484 -
Powered by Drupal