You are here

Home

ATCC64974_33820-T1, ATCC64974_33820-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_33820-T1
Unique NameATCC64974_33820-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000005.1:217094..218710-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_33820-T1 ID=ATCC64974_33820-T1|Name=ATCC64974_33820-T1|organism=Aspergillus niger N402|type=mRNA|length=1617bp|location=Sequence derived from alignment at OGUI01000005.1:217094..218710- (Aspergillus niger N402)
ATGACCAAGTCTCCTGACGAAAAACCCCTCGAGGTGCTCGACCGCACGTC
TTCCTGTGCTGAAGGTCAGATCGTCACCCACGATGCCCTCGTCACCCAGC
GTGGCATCAAGTCCCGCCACGCTCAGATGATGGCCATCGGCGGCACCATA
GGCACAGGTCTCTTCGTGGGAGTAGGAGAGGTGCTCGCGCTGGCCGGACC
AGCCAACATCCTGCTTGCCTACATCACCATCTGCATCATTGTCTACGCCA
TCATCACCGCCACCAACGAAATGAACACTTACCTCCCCTTCAGCGGCTGC
TCAATGGCCGCCTACGGCACCCGCTTCGTATCTCCCAGCTTAGGCTTCGC
CATGGGCCTCCTCTACTGGTACAGCTTCGGCATCCTCGTCGCCTACGAAA
CCACGGCCGCCGCCCTCGTCATCAACTACTGGTCCAACCCCGTCCCTCTC
GCCGTCTGGATCACCCTCATGCTTATCGTCGTCCTCGCCCTGAACTTCTT
CCCTGTCAAAGTCTACGGCGAGACCGAATTCTGGTTTGCCTCCCTCAAAG
TCTTCCTCATCATCGGCCTCCTCATCCTCTCCTTCGTCCTCTTCCTCGGC
GGCGGTCCCAACCACACCCGTCTAGGCTTCCACTACTGGAAATCCCCCGG
CGCCTTCAACACCTACCTCGTCTCCGGCTCCACTGGCCGCTTCTGCGCCT
TCCTCTACACTCTCTGCTACTCCGTCTTCTCCTTCAACTTCGCCCCGGAA
CTCCTCGTTGTCGCCGCAGGCGAAATGCAAAACCCCCGCAAGAATCTACC
CCGCGCCGCGAAACAGTACTTCTATCGCCTTATCATCTTCTACATCCTCG
GCGTACTCGCCATCGGCGTCATCTGCCCCAGTAATGCCTCCGGCTTGACA
AACGGCACCGGCGTCGCCGCCTCGCCCTGGGTCATCGCCATTAAACGCGC
CGGTATTCATGGCCTCGACTCCGTCGTCAACGCCGTCATCATCACCTCCG
CCTGGTCCTCCGCGAACTCGTACCTCTACATGTCCAGTCGGACACTATAT
TCCCTCGCGAGGGCAGGCAGTGCTCCGAAGATCTTCACCCGCTGTACCCG
CCACGGCGTGCCCTACTATGCTGTGTTGTGCAGCTCGCTGTTCTCGTTGC
TAGCGTATATGGACTGTAGTTCTGGCGCTAGCACGGCGTTTAATTGGTTC
GTGAGTCTCACTAACACGGCGGGGTTTACGTCCTGGACGTGCTGTGGGAT
TATATTTTTGAGGTTCCGGGCGGCGTGTAATGCCCAGGGTTTGAAGGATC
TTCCGTATCGGTCGAGATTGCAGCCGTGGATGGGGATTATTGCCACGATG
GCTTGCCCGATCTTGTTGCTGTGTAATGGATTTGAGGTCTTCTTTCATGG
TCATTGGAGCGTGTCGTCATTTTTAACTTCGTATGTTGGACTCTTTGTCT
TTGTGGCGGTTTATACTGGACATCGGGTGATGAGGTGGAGGGATGGGTGG
TGGATTCCGGCTGAGAAGGTGGATTTGGTGAGTGGATTGGAGGAGGTGGA
GGCTTTGGGGGTGGATGGGGATGATGATGGGGAGAAGAGGGGATTTTGGA
GGAAGTTGTGGGAGTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000005.1:217094..218710-

>ATCC64974_33820-T1 ID=ATCC64974_33820-T1|Name=ATCC64974_33820-T1|organism=Aspergillus niger N402|type=CDS|length=1617bp|location=Sequence derived from alignment at OGUI01000005.1:217094..218710- (Aspergillus niger N402)
ATGACCAAGTCTCCTGACGAAAAACCCCTCGAGGTGCTCGACCGCACGTC
TTCCTGTGCTGAAGGTCAGATCGTCACCCACGATGCCCTCGTCACCCAGC
GTGGCATCAAGTCCCGCCACGCTCAGATGATGGCCATCGGCGGCACCATA
GGCACAGGTCTCTTCGTGGGAGTAGGAGAGGTGCTCGCGCTGGCCGGACC
AGCCAACATCCTGCTTGCCTACATCACCATCTGCATCATTGTCTACGCCA
TCATCACCGCCACCAACGAAATGAACACTTACCTCCCCTTCAGCGGCTGC
TCAATGGCCGCCTACGGCACCCGCTTCGTATCTCCCAGCTTAGGCTTCGC
CATGGGCCTCCTCTACTGGTACAGCTTCGGCATCCTCGTCGCCTACGAAA
CCACGGCCGCCGCCCTCGTCATCAACTACTGGTCCAACCCCGTCCCTCTC
GCCGTCTGGATCACCCTCATGCTTATCGTCGTCCTCGCCCTGAACTTCTT
CCCTGTCAAAGTCTACGGCGAGACCGAATTCTGGTTTGCCTCCCTCAAAG
TCTTCCTCATCATCGGCCTCCTCATCCTCTCCTTCGTCCTCTTCCTCGGC
GGCGGTCCCAACCACACCCGTCTAGGCTTCCACTACTGGAAATCCCCCGG
CGCCTTCAACACCTACCTCGTCTCCGGCTCCACTGGCCGCTTCTGCGCCT
TCCTCTACACTCTCTGCTACTCCGTCTTCTCCTTCAACTTCGCCCCGGAA
CTCCTCGTTGTCGCCGCAGGCGAAATGCAAAACCCCCGCAAGAATCTACC
CCGCGCCGCGAAACAGTACTTCTATCGCCTTATCATCTTCTACATCCTCG
GCGTACTCGCCATCGGCGTCATCTGCCCCAGTAATGCCTCCGGCTTGACA
AACGGCACCGGCGTCGCCGCCTCGCCCTGGGTCATCGCCATTAAACGCGC
CGGTATTCATGGCCTCGACTCCGTCGTCAACGCCGTCATCATCACCTCCG
CCTGGTCCTCCGCGAACTCGTACCTCTACATGTCCAGTCGGACACTATAT
TCCCTCGCGAGGGCAGGCAGTGCTCCGAAGATCTTCACCCGCTGTACCCG
CCACGGCGTGCCCTACTATGCTGTGTTGTGCAGCTCGCTGTTCTCGTTGC
TAGCGTATATGGACTGTAGTTCTGGCGCTAGCACGGCGTTTAATTGGTTC
GTGAGTCTCACTAACACGGCGGGGTTTACGTCCTGGACGTGCTGTGGGAT
TATATTTTTGAGGTTCCGGGCGGCGTGTAATGCCCAGGGTTTGAAGGATC
TTCCGTATCGGTCGAGATTGCAGCCGTGGATGGGGATTATTGCCACGATG
GCTTGCCCGATCTTGTTGCTGTGTAATGGATTTGAGGTCTTCTTTCATGG
TCATTGGAGCGTGTCGTCATTTTTAACTTCGTATGTTGGACTCTTTGTCT
TTGTGGCGGTTTATACTGGACATCGGGTGATGAGGTGGAGGGATGGGTGG
TGGATTCCGGCTGAGAAGGTGGATTTGGTGAGTGGATTGGAGGAGGTGGA
GGCTTTGGGGGTGGATGGGGATGATGATGGGGAGAAGAGGGGATTTTGGA
GGAAGTTGTGGGAGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_33820ATCC64974_33820Aspergillus niger N402gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_33820-T1.cdsATCC64974_33820-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_33820-T1.exon1ATCC64974_33820-T1.exon1Aspergillus niger N402exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_33820-T1ATCC64974_33820-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000051.3
NoteSMCOG1038:phenylalanine-specific permease
DBxrefInterPro:IPR004841
DBxrefInterPro:IPR002293
DBxrefPFAM:PF13520
DBxrefPFAM:PF00324
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000005.1supercontigOGUI01000005.1:217094..218710 -
Powered by Drupal