You are here

Home

ATCC64974_33830-T1, ATCC64974_33830-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_33830-T1
Unique NameATCC64974_33830-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000005.1:219319..220308+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_33830-T1 ID=ATCC64974_33830-T1|Name=ATCC64974_33830-T1|organism=Aspergillus niger N402|type=mRNA|length=990bp|location=Sequence derived from alignment at OGUI01000005.1:219319..220308+ (Aspergillus niger N402)
ATGACTTCAACCACTACTACCACCGTGGCGAAGAAAGAAGAGCCTCCACA
GCCCACAGAGTCGAACATCACCGGCAAATCAGCCATCCAGGCCATCTCAC
AAGGAGCCACCCTACCAAGCATCCCTTCCTTTACCTCCGCAGACAAGAAA
CGACGATGGATGCTGGAGCACATGGCCGGCGCCTTTAGAGTATTCGCTCG
CAAGGGTTTCTCCGAAGGAATGAGCGGGCACATCTCCTTGCGTGATCCAG
AGCATCCAGACTGCTTCTGGACGAATCCGTATGACTTCCCACCCACAAAA
TCGGCCGAGTCGCACCAGCTGAAAACCCCACAGACTTGGACTCCATTTCG
GCCTAGTCAAAGTATCCGATCTCATCCTACTCAACCATGCTGGCGAGCCC
GTCGGGGGCAACCGATCACGGCCAGCCAATGCCGCGGGCTTCCAGATCCA
CGGCGTCCTGCACAAGATGTATCCGCATGTGAACGCGGCGTGCCATGCCC
ACTCGAAGTACGGTAAAGCGTGGTCGACGTTCGCCAAGCCATTGGATATG
ATCAACCAGGACGTCACTATGTTTTATGGCGATGCGCAGGCCGTCTATCC
TGAGTTTGGGGGCGTAGTGCTAGAGGAAGAGGAAAGTCTGCGTCTGGGTA
GACACCTGGGTGACAAGGGGAAGTTGCTGATACTGCGAAACCATGGTCTT
CTTACGGTCGGACAGACGGTTGATGAAGCGGCTTATCTTTTCACTTTGGC
TGAGCGAAGCTGCGAGATCCAGCTGCAGGTGGATGCAGCTGCTGCTCAGG
GACTTGAGAAGAAGCTTATTGAGCCGGATGCAGCTGATTTTACGTTCAAG
ATGACTAGTGATCCGGTAAGTGGCAATGAACACTTTATGTTAGAGGATAT
GGCTAATGAAAGCAGGAGGCGTTGTATCATGAGTTCCAACCGGATTATGA
GATGGAGCGAGCGCTGTGCAACGACCAGTTTCTACAGTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000005.1:219319..220308+

>ATCC64974_33830-T1 ID=ATCC64974_33830-T1|Name=ATCC64974_33830-T1|organism=Aspergillus niger N402|type=CDS|length=2655bp|location=Sequence derived from alignment at OGUI01000005.1:219319..220308+ (Aspergillus niger N402)
ATGACTTCAACCACTACTACCACCGTGGCGAAGAAAGAAGAGCCTCCACA
GCCCACAGAGTCGAACATCACCGGCAAATCAGCCATCCAGGCCATCTCAC
AAGGAGCCACCCTACCAAGCATCCCTTCCTTTACCTCCGCAGACAAGAAA
CGACGATGGATGCTGGAGCACATGGCCGGCGCCTTTAGAGTATTCGCTCG
CAAGGGTTTCTCCGAAGGAATGAGCGGGCACATCTCCTTGCGTGATCCAG
AGCATCCAGACTGCTTCTGGACGAATCCACTTGGACTCCATTTCGGCCTA
GTCAAAGTATCCGATCTCATCCTACTCAACCATGCTGGCGAGCCCGTCGG
GGGCAACCGATCACGGCCAGCCAATGCCGCGGGCTTCCAGATCCACGGCG
TCCTGCACAAGATGTATCCGCATGTGAACGCGGCGTGCCATGCCCACTCG
AAGTACGGTAAAGCGTGGTCGACGTTCGCCAAGCCATTGGATATGATCAA
CCAGGACGTCACTATGTTTTATGGCGATGCGCAGGCCGTCTATCCTGAGT
TTGGGGGCGTAGTGCTAGAGGAAGAGGAAAGTCTGCGTCTGGGTAGACAC
CTGGGTGACAAGGGGAAGTTGCTGATACTGCGAAACCATGGTCTTCTTAC
GGTCGGACAGACGGTTGATGAAGCGGCTTATCTTTTCACTTTGGCTGAGC
GAAGCTGCGAGATCCAGCTGCAGGTGGATGCAGCTGCTGCTCAGGGACTT
GAGAAGAAGCTTATTGAGCCGGATGCAGCTGATTTTACGTTCAAGATGAC
TAGTGATCCGGAGGCGTTGTATCATGAGTTCCAACCGGATTATGAGATGG
AGCGAGCGCTGTGCAACGACCAGTTTCTACAGTGAATGACTTCAACCACT
ACTACCACCGTGGCGAAGAAAGAAGAGCCTCCACAGCCCACAGAGTCGAA
CATCACCGGCAAATCAGCCATCCAGGCCATCTCACAAGGAGCCACCCTAC
CAAGCATCCCTTCCTTTACCTCCGCAGACAAGAAACGACGATGGATGCTG
GAGCACATGGCCGGCGCCTTTAGAGTATTCGCTCGCAAGGGTTTCTCCGA
AGGAATGAGCGGGCACATCTCCTTGCGTGATCCAGAGCATCCAGACTGCT
TCTGGACGAATCCACTTGGACTCCATTTCGGCCTAGTCAAAGTATCCGAT
CTCATCCTACTCAACCATGCTGGCGAGCCCGTCGGGGGCAACCGATCACG
GCCAGCCAATGCCGCGGGCTTCCAGATCCACGGCGTCCTGCACAAGATGT
ATCCGCATGTGAACGCGGCGTGCCATGCCCACTCGAAGTACGGTAAAGCG
TGGTCGACGTTCGCCAAGCCATTGGATATGATCAACCAGGACGTCACTAT
GTTTTATGGCGATGCGCAGGCCGTCTATCCTGAGTTTGGGGGCGTAGTGC
TAGAGGAAGAGGAAAGTCTGCGTCTGGGTAGACACCTGGGTGACAAGGGG
AAGTTGCTGATACTGCGAAACCATGGTCTTCTTACGGTCGGACAGACGGT
TGATGAAGCGGCTTATCTTTTCACTTTGGCTGAGCGAAGCTGCGAGATCC
AGCTGCAGGTGGATGCAGCTGCTGCTCAGGGACTTGAGAAGAAGCTTATT
GAGCCGGATGCAGCTGATTTTACGTTCAAGATGACTAGTGATCCGGAGGC
GTTGTATCATGAGTTCCAACCGGATTATGAGATGGAGCGAGCGCTGTGCA
ACGACCAGTTTCTACAGTGAATGACTTCAACCACTACTACCACCGTGGCG
AAGAAAGAAGAGCCTCCACAGCCCACAGAGTCGAACATCACCGGCAAATC
AGCCATCCAGGCCATCTCACAAGGAGCCACCCTACCAAGCATCCCTTCCT
TTACCTCCGCAGACAAGAAACGACGATGGATGCTGGAGCACATGGCCGGC
GCCTTTAGAGTATTCGCTCGCAAGGGTTTCTCCGAAGGAATGAGCGGGCA
CATCTCCTTGCGTGATCCAGAGCATCCAGACTGCTTCTGGACGAATCCAC
TTGGACTCCATTTCGGCCTAGTCAAAGTATCCGATCTCATCCTACTCAAC
CATGCTGGCGAGCCCGTCGGGGGCAACCGATCACGGCCAGCCAATGCCGC
GGGCTTCCAGATCCACGGCGTCCTGCACAAGATGTATCCGCATGTGAACG
CGGCGTGCCATGCCCACTCGAAGTACGGTAAAGCGTGGTCGACGTTCGCC
AAGCCATTGGATATGATCAACCAGGACGTCACTATGTTTTATGGCGATGC
GCAGGCCGTCTATCCTGAGTTTGGGGGCGTAGTGCTAGAGGAAGAGGAAA
GTCTGCGTCTGGGTAGACACCTGGGTGACAAGGGGAAGTTGCTGATACTG
CGAAACCATGGTCTTCTTACGGTCGGACAGACGGTTGATGAAGCGGCTTA
TCTTTTCACTTTGGCTGAGCGAAGCTGCGAGATCCAGCTGCAGGTGGATG
CAGCTGCTGCTCAGGGACTTGAGAAGAAGCTTATTGAGCCGGATGCAGCT
GATTTTACGTTCAAGATGACTAGTGATCCGGAGGCGTTGTATCATGAGTT
CCAACCGGATTATGAGATGGAGCGAGCGCTGTGCAACGACCAGTTTCTAC
AGTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_33830ATCC64974_33830Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_33830-T1.exon1ATCC64974_33830-T1.exon1Aspergillus niger N402exon
ATCC64974_33830-T1.exon2ATCC64974_33830-T1.exon2Aspergillus niger N402exon
ATCC64974_33830-T1.exon3ATCC64974_33830-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_33830-T1.cdsATCC64974_33830-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_33830-T1ATCC64974_33830-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000051.3
NoteEggNog:ENOG41
DBxrefInterPro:IPR036409
DBxrefInterPro:IPR001303
DBxrefPFAM:PF00596
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000005.1supercontigOGUI01000005.1:219319..220308 +
Powered by Drupal