You are here

ATCC64974_33960-T1, ATCC64974_33960-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_33960-T1
Unique NameATCC64974_33960-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000005.1:252775..253567+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_33960-T1 ID=ATCC64974_33960-T1|Name=ATCC64974_33960-T1|organism=Aspergillus niger N402|type=mRNA|length=793bp|location=Sequence derived from alignment at OGUI01000005.1:252775..253567+ (Aspergillus niger N402)
ATGGCCATGAGCCATGGCCACCACCAAAGTGGAAATATAAAAAGCCATGT ATGTTCTGCGGCTTCATCTCAAGCATACTTGGTGCTAAAGTGCGAAGTAG GCCATTCGGATTGCGCTAAAGGGGACAAAACACTTGTTTCTCTTTCCCCT CTGGTCCACCCAAACGCACGGGCAACAGAAAGCGTCTCTAGTTTCGCCTC AGGATTACTATCCGTCAGGAAAGCGTCCACTTTCGCCGGAGTATTGGGGT ATAAAGGACTTTCAACGCTCTCAAATGCCTCTGGATCAGCCAGCCAAAAA GGAGGTGTTGCATGAGACCCGCGAGGGCTTCCAGCACACCGAAGAGCGTG AGAGACTAACGGGAGTTCTGCAGACCGTGCTTGTCAGTAATCCACCAAAC CGCGATAACCAGCAGGATGTTCTAAATGCTGATTTCATCTACGATATTCT CATATCCACTTTCGACAAGCCATTGAGACGACGCATGCTAGTGGACTTTG AAACAGAGGCTAATTTCATGGATCACGATGTCTTCCAGAGAATGAATGTC CGCATGGACCCATATGATGGCCCGCCAACCCAACTTACGACTCGGGGGGA ATTGAGGCCCGTAGGTAAAATGCAGGCAACATGGACTATTTGTGGCCACG AAAAGCCATATTGTGCCGAATTTTATGTTGTTCGAGGTACCAGTTTTGAT ATCATCCTTGGCACCACTTCATGCCGGGATATCGGTCTTTACCGTATGGA TCCTATGGTTGCCAGACGACTCGGTAACCCGGAACAGACATAG
back to top

Coding sequence (CDS) from alignment at OGUI01000005.1:252775..253567+

>ATCC64974_33960-T1 ID=ATCC64974_33960-T1|Name=ATCC64974_33960-T1|organism=Aspergillus niger N402|type=CDS|length=1482bp|location=Sequence derived from alignment at OGUI01000005.1:252775..253567+ (Aspergillus niger N402)
ATGGCCATGAGCCATGGCCACCACCAAAGTGGAAATATAAAAAGCCATGC
CATTCGGATTGCGCTAAAGGGGACAAAACACTTGTTTCTCTTTCCCCTCT
GGTCCACCCAAACGCACGGGCAACAGAAAGCGTCTCTAGTTTCGCCTCAG
GATTACTATCCGTCAGGAAAGCGTCCACTTTCGCCGGAGTATTGGGGTAT
AAAGGACTTTCAACGCTCTCAAATGCCTCTGGATCAGCCAGCCAAAAAGG
AGGTGTTGCATGAGACCCGCGAGGGCTTCCAGCACACCGAAGAGCGTGAG
AGACTAACGGGAGTTCTGCAGACCGTGCTTGTCAGTAATCCACCAAACCG
CGATAACCAGCAGGATGTTCTAAATGCTGATTTCATCTACGATATTCTCA
TATCCACTTTCGACAAGCCATTGAGACGACGCATGCTAGTGGACTTTGAA
ACAGAGGCTAATTTCATGGATCACGATGTCTTCCAGAGAATGAATGTCCG
CATGGACCCATATGATGGCCCGCCAACCCAACTTACGACTCGGGGGGAAT
TGAGGCCCGTAGGTAAAATGCAGGCAACATGGACTATTTGTGGCCACGAA
AAGCCATATTGTGCCGAATTTTATGTTGTTCGAGGTACCAGTTTTGATAT
CATCCTTGGCACCACTTCATGCCGGGATATCGGTCTTTACCGTATGGATC
CTATGGTTGCCAGACGACTCGGTAACCCGGAACAGACATAGATGGCCATG
AGCCATGGCCACCACCAAAGTGGAAATATAAAAAGCCATGCCATTCGGAT
TGCGCTAAAGGGGACAAAACACTTGTTTCTCTTTCCCCTCTGGTCCACCC
AAACGCACGGGCAACAGAAAGCGTCTCTAGTTTCGCCTCAGGATTACTAT
CCGTCAGGAAAGCGTCCACTTTCGCCGGAGTATTGGGGTATAAAGGACTT
TCAACGCTCTCAAATGCCTCTGGATCAGCCAGCCAAAAAGGAGGTGTTGC
ATGAGACCCGCGAGGGCTTCCAGCACACCGAAGAGCGTGAGAGACTAACG
GGAGTTCTGCAGACCGTGCTTGTCAGTAATCCACCAAACCGCGATAACCA
GCAGGATGTTCTAAATGCTGATTTCATCTACGATATTCTCATATCCACTT
TCGACAAGCCATTGAGACGACGCATGCTAGTGGACTTTGAAACAGAGGCT
AATTTCATGGATCACGATGTCTTCCAGAGAATGAATGTCCGCATGGACCC
ATATGATGGCCCGCCAACCCAACTTACGACTCGGGGGGAATTGAGGCCCG
TAGGTAAAATGCAGGCAACATGGACTATTTGTGGCCACGAAAAGCCATAT
TGTGCCGAATTTTATGTTGTTCGAGGTACCAGTTTTGATATCATCCTTGG
CACCACTTCATGCCGGGATATCGGTCTTTACCGTATGGATCCTATGGTTG
CCAGACGACTCGGTAACCCGGAACAGACATAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_33960ATCC64974_33960Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_33960-T1.exon1ATCC64974_33960-T1.exon1Aspergillus niger N402exon
ATCC64974_33960-T1.exon2ATCC64974_33960-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_33960-T1.cdsATCC64974_33960-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_33960-T1ATCC64974_33960-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR021109
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000005.1supercontigOGUI01000005.1:252775..253567 +