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ATCC64974_3430-T1, ATCC64974_3430-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_3430-T1
Unique NameATCC64974_3430-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000001.1:1045401..1046210-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_3430-T1 ID=ATCC64974_3430-T1|Name=ATCC64974_3430-T1|organism=Aspergillus niger N402|type=mRNA|length=810bp|location=Sequence derived from alignment at OGUI01000001.1:1045401..1046210- (Aspergillus niger N402)
ATGGCCCCTCTCGTCTCCTCCCTGGCCCTGCGCACGCTCCGGACCCTGGT
CCAGCGTCCCGCCGCCATTAAATCCACCTCCTGCTCCATCACCACCCTCG
CCGCCGCCGCTCCCCGACGACCTTTCCAGCCTGTTCTCCGCACGCCCACC
GCAGTCGCTGCTGCTGCTGCTGCACGCAAGACCTCCATCCCCTCTTCCTC
CTCCTCCATCCTCCGGCAATTCTCCACCTCCCCGTTCCGCCAGGCTACCT
ACAACCAAGTGCGGCGCGGATGCCGTGTTGCGCAGCGCGCACGTCGCTCC
CGGTCTCCGGCGCTGATCGGCCGGTCTCAGATGAAGGGAGTGTGTTTGAA
GACGGGTATTACGAAGCCGAAGAAGCCTAACTCCGGTGAGCGGAAGACGG
CGAGAGTGAGGTTGAGTAGTGGGAAGGTGGTTACGGCTTATATTCCTGGT
GAAGGTGAGATCACTTTCCTCCATTCGTTTTTTTGTGGTTCGGGTTGGGG
ATCGGGGGTGAGGAGAATGAGAATAGATGGGGATAATGGAATTGAGCGAG
AGAGGCTAATATCTCTGGTCTGTGTGTAGGACACAATATCCAGCAGCACA
GTGTCGTTATGGTCCGTGGTGGTCGTGTGCCTGATTGTCCTGGTGTGAAG
TACCATTTGGTTCGTGGTGCTATGGATTTGGTAGGTTTACTTTCTGATAT
GGGTTTCCTGGGAATTCGGGGGTAGGTTTGCTAACTTCTCTCAGGGTGGT
GTTGCTTCTCGGTTGAACAGTCGGTCCAAGTATGGTACGAAGAAGCCTAA
GAAGGACTAG
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Coding sequence (CDS) from alignment at OGUI01000001.1:1045401..1046210-

>ATCC64974_3430-T1 ID=ATCC64974_3430-T1|Name=ATCC64974_3430-T1|organism=Aspergillus niger N402|type=CDS|length=1863bp|location=Sequence derived from alignment at OGUI01000001.1:1045401..1046210- (Aspergillus niger N402)
GGTGGTGTTGCTTCTCGGTTGAACAGTCGGTCCAAGTATGGTACGAAGAA
GCCTAAGAAGGACTAGGACACAATATCCAGCAGCACAGTGTCGTTATGGT
CCGTGGTGGTCGTGTGCCTGATTGTCCTGGTGTGAAGTACCATTTGGTTC
GTGGTGCTATGGATTTGATGGCCCCTCTCGTCTCCTCCCTGGCCCTGCGC
ACGCTCCGGACCCTGGTCCAGCGTCCCGCCGCCATTAAATCCACCTCCTG
CTCCATCACCACCCTCGCCGCCGCCGCTCCCCGACGACCTTTCCAGCCTG
TTCTCCGCACGCCCACCGCAGTCGCTGCTGCTGCTGCTGCACGCAAGACC
TCCATCCCCTCTTCCTCCTCCTCCATCCTCCGGCAATTCTCCACCTCCCC
GTTCCGCCAGGCTACCTACAACCAAGTGCGGCGCGGATGCCGTGTTGCGC
AGCGCGCACGTCGCTCCCGGTCTCCGGCGCTGATCGGCCGGTCTCAGATG
AAGGGAGTGTGTTTGAAGACGGGTATTACGAAGCCGAAGAAGCCTAACTC
CGGTGAGCGGAAGACGGCGAGAGTGAGGTTGAGTAGTGGGAAGGTGGTTA
CGGCTTATATTCCTGGTGAAGGGTGGTGTTGCTTCTCGGTTGAACAGTCG
GTCCAAGTATGGTACGAAGAAGCCTAAGAAGGACTAGGACACAATATCCA
GCAGCACAGTGTCGTTATGGTCCGTGGTGGTCGTGTGCCTGATTGTCCTG
GTGTGAAGTACCATTTGGTTCGTGGTGCTATGGATTTGATGGCCCCTCTC
GTCTCCTCCCTGGCCCTGCGCACGCTCCGGACCCTGGTCCAGCGTCCCGC
CGCCATTAAATCCACCTCCTGCTCCATCACCACCCTCGCCGCCGCCGCTC
CCCGACGACCTTTCCAGCCTGTTCTCCGCACGCCCACCGCAGTCGCTGCT
GCTGCTGCTGCACGCAAGACCTCCATCCCCTCTTCCTCCTCCTCCATCCT
CCGGCAATTCTCCACCTCCCCGTTCCGCCAGGCTACCTACAACCAAGTGC
GGCGCGGATGCCGTGTTGCGCAGCGCGCACGTCGCTCCCGGTCTCCGGCG
CTGATCGGCCGGTCTCAGATGAAGGGAGTGTGTTTGAAGACGGGTATTAC
GAAGCCGAAGAAGCCTAACTCCGGTGAGCGGAAGACGGCGAGAGTGAGGT
TGAGTAGTGGGAAGGTGGTTACGGCTTATATTCCTGGTGAAGGGTGGTGT
TGCTTCTCGGTTGAACAGTCGGTCCAAGTATGGTACGAAGAAGCCTAAGA
AGGACTAGGACACAATATCCAGCAGCACAGTGTCGTTATGGTCCGTGGTG
GTCGTGTGCCTGATTGTCCTGGTGTGAAGTACCATTTGGTTCGTGGTGCT
ATGGATTTGATGGCCCCTCTCGTCTCCTCCCTGGCCCTGCGCACGCTCCG
GACCCTGGTCCAGCGTCCCGCCGCCATTAAATCCACCTCCTGCTCCATCA
CCACCCTCGCCGCCGCCGCTCCCCGACGACCTTTCCAGCCTGTTCTCCGC
ACGCCCACCGCAGTCGCTGCTGCTGCTGCTGCACGCAAGACCTCCATCCC
CTCTTCCTCCTCCTCCATCCTCCGGCAATTCTCCACCTCCCCGTTCCGCC
AGGCTACCTACAACCAAGTGCGGCGCGGATGCCGTGTTGCGCAGCGCGCA
CGTCGCTCCCGGTCTCCGGCGCTGATCGGCCGGTCTCAGATGAAGGGAGT
GTGTTTGAAGACGGGTATTACGAAGCCGAAGAAGCCTAACTCCGGTGAGC
GGAAGACGGCGAGAGTGAGGTTGAGTAGTGGGAAGGTGGTTACGGCTTAT
ATTCCTGGTGAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015935small ribosomal subunit
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_3430ATCC64974_3430Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_3430-T1ATCC64974_3430-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_3430-T1.cdsATCC64974_3430-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_3430-T1.exon3ATCC64974_3430-T1.exon3Aspergillus niger N402exon
ATCC64974_3430-T1.exon2ATCC64974_3430-T1.exon2Aspergillus niger N402exon
ATCC64974_3430-T1.exon1ATCC64974_3430-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG092653KS
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR005679
DBxrefInterPro:IPR006032
DBxrefPFAM:PF00164
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000001.1supercontigOGUI01000001.1:1045401..1046210 -
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