You are here

Home

ATCC64974_34310-T1, ATCC64974_34310-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_34310-T1
Unique NameATCC64974_34310-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000005.1:355081..357195+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_34310-T1 ID=ATCC64974_34310-T1|Name=ATCC64974_34310-T1|organism=Aspergillus niger N402|type=mRNA|length=2115bp|location=Sequence derived from alignment at OGUI01000005.1:355081..357195+ (Aspergillus niger N402)
ATGGCCTGTCTTACTGACCTGCCAAACGAGCTCCTGCTGGACATAGTAAG
CTACATCGAATACAACCTCGATCTGGCAGCACTGTCCCAGACCAACCGTC
GAATCTACCATCTTACGAGTTCGCTCGTGGACCAAAAAATCAATCATATG
TTTAAAAATAGCCGCCTATATGTCAACGAAAGCCGTGCAATGCAACGAGC
AGCTGCAAATGGAAACGTGGACTGTGTCCGCAGGTTGTTTCGAGCCGGGA
TCCCCGCGCGCCCCGACATACACTATGACCGCTGGAAGCCCAGTGATCCG
GCTACTGTTGCGGCCATGTACGGACATGCAAATGTTGTTCGGCTGTTCTT
GGATGCTGGAGTCGATCCAAATGTTATAACATCCCATCAAAGTTTATGTG
CCCGTGGTAATCTTTTAACCATCGCCATCCAGCAAGGCCATGAATCGGTT
GTTCGACTACTGCTGGAACATGGGGTAAAGCTGGTCTTTACCAAGGAAGA
CCCGGATATAAACCAGCCCCTATCCGTTGCAACGGAGTTCGGTCACTACG
AGCTGGTGAAGCTGCTTCTAGAACATGGGTGCAATCCCCTGACACCCGAT
TACCGACAGGATGGTAAAGATGAAACATCGGCTTTCTTCAGAGCTGGCGC
TCGGAGTCTGCCTATTCTGCAGCTGTTCCTGGAGCCCAATATACCAAAGG
ACTACTTCTCTGATCCTAAGTACAACTCTCAAGAGTTGGTATTGAAGGTT
CTTGAGTGGGGAGATATACCGCTGGCCAGGTTCCTTTTGGATCACGGCGC
CGAGCTTGCCATACCAAATTACGACTCATCGGAACCTACTCGCGTCGTTC
CACTTGATGACGTTCTGTATCGCGTCGGCTGTGCGTCTGGCCAGTATTCT
GAAAAAGCTGATTTTCTCCTCCAAAAATTCAATGTAGATAACATCATCAA
AGACGGGAACTTTTCCGCTGTTGTTTGTCTTGCTGCTGGTGCGGCTCTCG
GAGGCAATGTGGGACTGCTTGACCGTGTGTTAGAGGTTGATTGGGTACAC
ACACGCAAAGTCATTCAGCCACAGGACTGGAAAGATCGCTTAACCTTGTA
CCTAGTCGATGCAGTCCGCTGGGGTCATCTTGAAGTTGCCAGACTGTTGC
TTGATCACGGTGCAGATCCCAACGGCCCAGCCCCAGACGGCGAAGACTCA
ACATTTACCAGGCCTGTATACACTGCAGTGGAGAAGGGACACACAAAGCT
TGTCGTACTACTGCTTGATCGGGGAGCCGACCCCAACCCAGAAGACCGTG
GTGGTCTGTTCTTGTTTGCCACTAGTTGTTGCTTACATCAGGTAGTGCGG
CAGACACGTTTGGATATTGTCCAGCTTCTGATTGACAGAAAGATCCATGT
GCCGGAGGTGTCAAGTGGCTTAGACCCAATGACATCTCTGGTCTGTTCGG
GAGCTAAAGTATTCCAGCTGGCTGTACAGCATATGAACCTCAAACTTAAA
GTAGGTGACATCTGGCATATGCAGGCCTTTCAGGTCGCAGTGAAGACTGG
AGACATTCCAATTATCACAGAATTTCTCGAGGCAGGGTTTAAGCCAAATA
ATTGGTCCTGGCTTCTGCCCAACGCGGCAGATCATTTTGACCCAGATGTT
GCCGAGCAGGCCGTTGATCTGTTGCTCAAGTACGGTGCAGATATTGACGT
ACAGAGTCATGAAACGAGCAGGCCAAATCTTTACAGCTTTAATTCGTCCT
GTCTAGCAGTACGCAAAGACAGAGTCATTAAGCTGCTCTTGAAGAAAGGC
GCCAATCCTTTCAGGGTTGACTGGTCCGGAAAACACGTTTTCATAGCGGC
AGCAGCGGCAGGCGAGATTCATTCTGTGAAAGGCGTATTGGAGTACATTG
AGGAGACAGGTATCCCATTCGGTGAGGTGAGATCCATGGTTGAGGAAGCC
GCGCGATGTGCAACCAGTGCTGCGGAGTTTGCGGTACCTTTAGCTCAAAA
AGGCCTACTATCGACTAGCAGAGCATTTGAAGGTCCCTTCGAGAAAGCTA
GGAATATTACTAGAGTGGAGGAGTACTTATGGCGTTGGTACTGGCGCAGA
GTCTATCCTTGTTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000005.1:355081..357195+

>ATCC64974_34310-T1 ID=ATCC64974_34310-T1|Name=ATCC64974_34310-T1|organism=Aspergillus niger N402|type=CDS|length=2115bp|location=Sequence derived from alignment at OGUI01000005.1:355081..357195+ (Aspergillus niger N402)
ATGGCCTGTCTTACTGACCTGCCAAACGAGCTCCTGCTGGACATAGTAAG
CTACATCGAATACAACCTCGATCTGGCAGCACTGTCCCAGACCAACCGTC
GAATCTACCATCTTACGAGTTCGCTCGTGGACCAAAAAATCAATCATATG
TTTAAAAATAGCCGCCTATATGTCAACGAAAGCCGTGCAATGCAACGAGC
AGCTGCAAATGGAAACGTGGACTGTGTCCGCAGGTTGTTTCGAGCCGGGA
TCCCCGCGCGCCCCGACATACACTATGACCGCTGGAAGCCCAGTGATCCG
GCTACTGTTGCGGCCATGTACGGACATGCAAATGTTGTTCGGCTGTTCTT
GGATGCTGGAGTCGATCCAAATGTTATAACATCCCATCAAAGTTTATGTG
CCCGTGGTAATCTTTTAACCATCGCCATCCAGCAAGGCCATGAATCGGTT
GTTCGACTACTGCTGGAACATGGGGTAAAGCTGGTCTTTACCAAGGAAGA
CCCGGATATAAACCAGCCCCTATCCGTTGCAACGGAGTTCGGTCACTACG
AGCTGGTGAAGCTGCTTCTAGAACATGGGTGCAATCCCCTGACACCCGAT
TACCGACAGGATGGTAAAGATGAAACATCGGCTTTCTTCAGAGCTGGCGC
TCGGAGTCTGCCTATTCTGCAGCTGTTCCTGGAGCCCAATATACCAAAGG
ACTACTTCTCTGATCCTAAGTACAACTCTCAAGAGTTGGTATTGAAGGTT
CTTGAGTGGGGAGATATACCGCTGGCCAGGTTCCTTTTGGATCACGGCGC
CGAGCTTGCCATACCAAATTACGACTCATCGGAACCTACTCGCGTCGTTC
CACTTGATGACGTTCTGTATCGCGTCGGCTGTGCGTCTGGCCAGTATTCT
GAAAAAGCTGATTTTCTCCTCCAAAAATTCAATGTAGATAACATCATCAA
AGACGGGAACTTTTCCGCTGTTGTTTGTCTTGCTGCTGGTGCGGCTCTCG
GAGGCAATGTGGGACTGCTTGACCGTGTGTTAGAGGTTGATTGGGTACAC
ACACGCAAAGTCATTCAGCCACAGGACTGGAAAGATCGCTTAACCTTGTA
CCTAGTCGATGCAGTCCGCTGGGGTCATCTTGAAGTTGCCAGACTGTTGC
TTGATCACGGTGCAGATCCCAACGGCCCAGCCCCAGACGGCGAAGACTCA
ACATTTACCAGGCCTGTATACACTGCAGTGGAGAAGGGACACACAAAGCT
TGTCGTACTACTGCTTGATCGGGGAGCCGACCCCAACCCAGAAGACCGTG
GTGGTCTGTTCTTGTTTGCCACTAGTTGTTGCTTACATCAGGTAGTGCGG
CAGACACGTTTGGATATTGTCCAGCTTCTGATTGACAGAAAGATCCATGT
GCCGGAGGTGTCAAGTGGCTTAGACCCAATGACATCTCTGGTCTGTTCGG
GAGCTAAAGTATTCCAGCTGGCTGTACAGCATATGAACCTCAAACTTAAA
GTAGGTGACATCTGGCATATGCAGGCCTTTCAGGTCGCAGTGAAGACTGG
AGACATTCCAATTATCACAGAATTTCTCGAGGCAGGGTTTAAGCCAAATA
ATTGGTCCTGGCTTCTGCCCAACGCGGCAGATCATTTTGACCCAGATGTT
GCCGAGCAGGCCGTTGATCTGTTGCTCAAGTACGGTGCAGATATTGACGT
ACAGAGTCATGAAACGAGCAGGCCAAATCTTTACAGCTTTAATTCGTCCT
GTCTAGCAGTACGCAAAGACAGAGTCATTAAGCTGCTCTTGAAGAAAGGC
GCCAATCCTTTCAGGGTTGACTGGTCCGGAAAACACGTTTTCATAGCGGC
AGCAGCGGCAGGCGAGATTCATTCTGTGAAAGGCGTATTGGAGTACATTG
AGGAGACAGGTATCCCATTCGGTGAGGTGAGATCCATGGTTGAGGAAGCC
GCGCGATGTGCAACCAGTGCTGCGGAGTTTGCGGTACCTTTAGCTCAAAA
AGGCCTACTATCGACTAGCAGAGCATTTGAAGGTCCCTTCGAGAAAGCTA
GGAATATTACTAGAGTGGAGGAGTACTTATGGCGTTGGTACTGGCGCAGA
GTCTATCCTTGTTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_34310ATCC64974_34310Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_34310-T1.exon1ATCC64974_34310-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_34310-T1.cdsATCC64974_34310-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_34310-T1ATCC64974_34310-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR001810
DBxrefInterPro:IPR002110
DBxrefPFAM:PF12937
DBxrefPFAM:PF13637
DBxrefPFAM:PF12796
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000005.1supercontigOGUI01000005.1:355081..357195 +
Powered by Drupal