You are here

Home

ATCC64974_34670-T1, ATCC64974_34670-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_34670-T1
Unique NameATCC64974_34670-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000005.1:515061..515905-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_34670-T1 ID=ATCC64974_34670-T1|Name=ATCC64974_34670-T1|organism=Aspergillus niger N402|type=mRNA|length=845bp|location=Sequence derived from alignment at OGUI01000005.1:515061..515905- (Aspergillus niger N402)
ATGTCGCAAAGTCATGCTTTGTCCGATGATCAGGTTTGTCGCTCGATTTC
CGACTAGGGACCATGCATGTGCCCGCTTCCGAGCTGAGCTGATACCATTA
TCTCCATCCAGGTTGCGGGCGAGCTCCGCAAGATGACGGCCTTCATCCGG
CAGGAAGCGCTGGAGAAGGCCCGTGAAATCCAGCTCAAAGCTGACGAAGA
GTTCGCCATCGAGAAGTCCAAGCTCGTTCGCCAGGAGACTGCCGCCATCG
ACACTCAGTATGAGAAGAAGTTCAAGCAAGCTTCCATGTCCCAGCAGATC
ACTCGCTCCACTCTCGCCAACCGCACCCGTCTTCGTGTTCTTTCTTCTCG
CCAGGAACTCCTTGATGATTTGTTCCAGAAGGCTCGTGATCAGATCTCCG
GTATCGCAGCTAAGGATGCGTCGAAGTATGAGGCTGTGCTGAAGGGCTTG
GTTCTTGAGGGCTTGTACGCTCTCAATGAAGACAAGGTGTCTATTCGGGC
GAGGAAGCAGGATACTGATGCTGTGAAGAAGGCCATTGAAGAGGCCGAAA
AGGAATTCAAGGAGACCGTCGGCAAGGAGACGTCTGCGGAGCTGGACGAG
GAGGAGCCGCTGCCCGAGGGATCGTAAGTCCCCTTTCACCTTTCTTACCT
CCAAATTTGTCCCCAATATGGTCGTCTAACCTGGTGAATTATAGTGCTGG
TGGTGTCATCATTATCGGTGGCCAGGGCAAGATCGAGATCAACAACACGT
TCGAAGAGCGGCTGCGCCTGCTCGAAATCGACGCCCTGCCCGCCGTCCGC
GAGACGCTGTTCGGTAAGAACACCAACCGGAGGTTCTACGACTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000005.1:515061..515905-

>ATCC64974_34670-T1 ID=ATCC64974_34670-T1|Name=ATCC64974_34670-T1|organism=Aspergillus niger N402|type=CDS|length=2088bp|location=Sequence derived from alignment at OGUI01000005.1:515061..515905- (Aspergillus niger N402)
TGCTGGTGGTGTCATCATTATCGGTGGCCAGGGCAAGATCGAGATCAACA
ACACGTTCGAAGAGCGGCTGCGCCTGCTCGAAATCGACGCCCTGCCCGCC
GTCCGCGAGACGCTGTTCGGTAAGAACACCAACCGGAGGTTCTACGACTA
GGTTGCGGGCGAGCTCCGCAAGATGACGGCCTTCATCCGGCAGGAAGCGC
TGGAGAAGGCCCGTGAAATCCAGCTCAAAGCTGACGAAGAGTTCGCCATC
GAGAAGTCCAAGCTCGTTCGCCAGGAGACTGCCGCCATCGACACTCAGTA
TGAGAAGAAGTTCAAGCAAGCTTCCATGTCCCAGCAGATCACTCGCTCCA
CTCTCGCCAACCGCACCCGTCTTCGTGTTCTTTCTTCTCGCCAGGAACTC
CTTGATGATTTGTTCCAGAAGGCTCGTGATCAGATCTCCGGTATCGCAGC
TAAGGATGCGTCGAAGTATGAGGCTGTGCTGAAGGGCTTGGTTCTTGAGG
GCTTGTACGCTCTCAATGAAGACAAGGTGTCTATTCGGGCGAGGAAGCAG
GATACTGATGCTGTGAAGAAGGCCATTGAAGAGGCCGAAAAGGAATTCAA
GGAGACCGTCGGCAAGGAGACGTCTGCGGAGCTGGACGAGGAGGAGCCGC
TGCCCGAGGGATCATGTCGCAAAGTCATGCTTTGTCCGATGATCAGTGCT
GGTGGTGTCATCATTATCGGTGGCCAGGGCAAGATCGAGATCAACAACAC
GTTCGAAGAGCGGCTGCGCCTGCTCGAAATCGACGCCCTGCCCGCCGTCC
GCGAGACGCTGTTCGGTAAGAACACCAACCGGAGGTTCTACGACTAGGTT
GCGGGCGAGCTCCGCAAGATGACGGCCTTCATCCGGCAGGAAGCGCTGGA
GAAGGCCCGTGAAATCCAGCTCAAAGCTGACGAAGAGTTCGCCATCGAGA
AGTCCAAGCTCGTTCGCCAGGAGACTGCCGCCATCGACACTCAGTATGAG
AAGAAGTTCAAGCAAGCTTCCATGTCCCAGCAGATCACTCGCTCCACTCT
CGCCAACCGCACCCGTCTTCGTGTTCTTTCTTCTCGCCAGGAACTCCTTG
ATGATTTGTTCCAGAAGGCTCGTGATCAGATCTCCGGTATCGCAGCTAAG
GATGCGTCGAAGTATGAGGCTGTGCTGAAGGGCTTGGTTCTTGAGGGCTT
GTACGCTCTCAATGAAGACAAGGTGTCTATTCGGGCGAGGAAGCAGGATA
CTGATGCTGTGAAGAAGGCCATTGAAGAGGCCGAAAAGGAATTCAAGGAG
ACCGTCGGCAAGGAGACGTCTGCGGAGCTGGACGAGGAGGAGCCGCTGCC
CGAGGGATCATGTCGCAAAGTCATGCTTTGTCCGATGATCAGTGCTGGTG
GTGTCATCATTATCGGTGGCCAGGGCAAGATCGAGATCAACAACACGTTC
GAAGAGCGGCTGCGCCTGCTCGAAATCGACGCCCTGCCCGCCGTCCGCGA
GACGCTGTTCGGTAAGAACACCAACCGGAGGTTCTACGACTAGGTTGCGG
GCGAGCTCCGCAAGATGACGGCCTTCATCCGGCAGGAAGCGCTGGAGAAG
GCCCGTGAAATCCAGCTCAAAGCTGACGAAGAGTTCGCCATCGAGAAGTC
CAAGCTCGTTCGCCAGGAGACTGCCGCCATCGACACTCAGTATGAGAAGA
AGTTCAAGCAAGCTTCCATGTCCCAGCAGATCACTCGCTCCACTCTCGCC
AACCGCACCCGTCTTCGTGTTCTTTCTTCTCGCCAGGAACTCCTTGATGA
TTTGTTCCAGAAGGCTCGTGATCAGATCTCCGGTATCGCAGCTAAGGATG
CGTCGAAGTATGAGGCTGTGCTGAAGGGCTTGGTTCTTGAGGGCTTGTAC
GCTCTCAATGAAGACAAGGTGTCTATTCGGGCGAGGAAGCAGGATACTGA
TGCTGTGAAGAAGGCCATTGAAGAGGCCGAAAAGGAATTCAAGGAGACCG
TCGGCAAGGAGACGTCTGCGGAGCTGGACGAGGAGGAGCCGCTGCCCGAG
GGATCATGTCGCAAAGTCATGCTTTGTCCGATGATCAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0033178proton-transporting two-sector ATPase complex, catalytic domain
Vocabulary: Molecular Function
TermDefinition
GO:0046961proton-transporting ATPase activity, rotational mechanism
Vocabulary: Biological Process
TermDefinition
GO:1902600proton transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
VMA4ATCC64974_34670Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_34670-T1ATCC64974_34670-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_34670-T1.cdsATCC64974_34670-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_34670-T1.exon3ATCC64974_34670-T1.exon3Aspergillus niger N402exon
ATCC64974_34670-T1.exon2ATCC64974_34670-T1.exon2Aspergillus niger N402exon
ATCC64974_34670-T1.exon1ATCC64974_34670-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09264OML
DBxrefInterPro:IPR038495
DBxrefInterPro:IPR002842
DBxrefPFAM:PF01991
ProductV-ATPase V1 sector subunit E
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000005.1supercontigOGUI01000005.1:515061..515905 -
Powered by Drupal