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ATCC64974_34890-T1, ATCC64974_34890-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_34890-T1
Unique NameATCC64974_34890-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000005.1:603635..604439-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_34890-T1 ID=ATCC64974_34890-T1|Name=ATCC64974_34890-T1|organism=Aspergillus niger N402|type=mRNA|length=805bp|location=Sequence derived from alignment at OGUI01000005.1:603635..604439- (Aspergillus niger N402)
ATGGTGATTATCAACCTTGTCCAGGGGATCGGTTTACAATCCAAGCTAAC
AGAACCAGTCTCAATCATTGCGTCCGTACCTTTTGGCTGTTAGATCTTCA
TTGACGGCAGCACTCGCGATATCGAACTTCGCTTCTCAAACCTCCGAAAG
ACAGTACGTTGGGCCGGTTCCCATCCCCTCACCCTTTTGGGTCGGACCAG
GCTAATTATGTATCTGGATAGCAATGTCCCCGAAATTGAAGCCGCAACTT
CTCCGGAACTACTTCTCAACCCCCTTACAATCTCCCGGAATGAGAACGAG
AGGGTCCTTATCGAGCCCAGCGTGAACAGTGTCCGTGTCAGCATCCGAAT
CAAGCAGGCAGATGAGATCGAACATATCTTGGTCCACAAGTTCACTAGGT
TCCTGACGCAGCGCGCGGAATCCTTCTTCATTCTACGGAGAAAGCCAGTG
AAGGGATATGACATTTCATTCCTCATTACGAACTTCCATACTGAACAGAT
GCTGAAACACAAATTGGTGGACTTCATCATTCAATTGTATGTTTCATCTG
CCTTGTCCATATGTCATTCGATCAATGAGAGGCTAACGATTTCTTCGTCT
AATAGTATGGAGGAAGTGGATAAGGAAATCTCGGAAATGAAGCTCTTCGT
ATGTGTCCATGTCCATCTGATTGATGGAGGCTTCTAACCCACATTTGCTG
TAGTTGAATGCTCGTGCTCGTTTCGTTGCTGAGTCGTTCTTGACACCGGT
AAGTCGCCCTGGCTACTTCAGCTGAACCTGGCTGATAAAATTACAGTTTG
ATTAG
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Coding sequence (CDS) from alignment at OGUI01000005.1:603635..604439-

>ATCC64974_34890-T1 ID=ATCC64974_34890-T1|Name=ATCC64974_34890-T1|organism=Aspergillus niger N402|type=CDS|length=3060bp|location=Sequence derived from alignment at OGUI01000005.1:603635..604439- (Aspergillus niger N402)
TTTGATTAGTTGAATGCTCGTGCTCGTTTCGTTGCTGAGTCGTTCTTGAC
ACCGTATGGAGGAAGTGGATAAGGAAATCTCGGAAATGAAGCTCTTCCAA
TGTCCCCGAAATTGAAGCCGCAACTTCTCCGGAACTACTTCTCAACCCCC
TTACAATCTCCCGGAATGAGAACGAGAGGGTCCTTATCGAGCCCAGCGTG
AACAGTGTCCGTGTCAGCATCCGAATCAAGCAGGCAGATGAGATCGAACA
TATCTTGGTCCACAAGTTCACTAGGTTCCTGACGCAGCGCGCGGAATCCT
TCTTCATTCTACGGAGAAAGCCAGTGAAGGGATATGACATTTCATTCCTC
ATTACGAACTTCCATACTGAACAGATGCTGAAACACAAATTGGTGGACTT
CATCATTCAATTTCTCAATCATTGCGTCCGTACCTTTTGGCTGTTAGATC
TTCATTGACGGCAGCACTCGCGATATCGAACTTCGCTTCTCAAACCTCCG
AAAGACAATGTTTGATTAGTTGAATGCTCGTGCTCGTTTCGTTGCTGAGT
CGTTCTTGACACCGTATGGAGGAAGTGGATAAGGAAATCTCGGAAATGAA
GCTCTTCCAATGTCCCCGAAATTGAAGCCGCAACTTCTCCGGAACTACTT
CTCAACCCCCTTACAATCTCCCGGAATGAGAACGAGAGGGTCCTTATCGA
GCCCAGCGTGAACAGTGTCCGTGTCAGCATCCGAATCAAGCAGGCAGATG
AGATCGAACATATCTTGGTCCACAAGTTCACTAGGTTCCTGACGCAGCGC
GCGGAATCCTTCTTCATTCTACGGAGAAAGCCAGTGAAGGGATATGACAT
TTCATTCCTCATTACGAACTTCCATACTGAACAGATGCTGAAACACAAAT
TGGTGGACTTCATCATTCAATTTCTCAATCATTGCGTCCGTACCTTTTGG
CTGTTAGATCTTCATTGACGGCAGCACTCGCGATATCGAACTTCGCTTCT
CAAACCTCCGAAAGACAATGTTTGATTAGTTGAATGCTCGTGCTCGTTTC
GTTGCTGAGTCGTTCTTGACACCGTATGGAGGAAGTGGATAAGGAAATCT
CGGAAATGAAGCTCTTCCAATGTCCCCGAAATTGAAGCCGCAACTTCTCC
GGAACTACTTCTCAACCCCCTTACAATCTCCCGGAATGAGAACGAGAGGG
TCCTTATCGAGCCCAGCGTGAACAGTGTCCGTGTCAGCATCCGAATCAAG
CAGGCAGATGAGATCGAACATATCTTGGTCCACAAGTTCACTAGGTTCCT
GACGCAGCGCGCGGAATCCTTCTTCATTCTACGGAGAAAGCCAGTGAAGG
GATATGACATTTCATTCCTCATTACGAACTTCCATACTGAACAGATGCTG
AAACACAAATTGGTGGACTTCATCATTCAATTTCTCAATCATTGCGTCCG
TACCTTTTGGCTGTTAGATCTTCATTGACGGCAGCACTCGCGATATCGAA
CTTCGCTTCTCAAACCTCCGAAAGACAATGTTTGATTAGTTGAATGCTCG
TGCTCGTTTCGTTGCTGAGTCGTTCTTGACACCGTATGGAGGAAGTGGAT
AAGGAAATCTCGGAAATGAAGCTCTTCCAATGTCCCCGAAATTGAAGCCG
CAACTTCTCCGGAACTACTTCTCAACCCCCTTACAATCTCCCGGAATGAG
AACGAGAGGGTCCTTATCGAGCCCAGCGTGAACAGTGTCCGTGTCAGCAT
CCGAATCAAGCAGGCAGATGAGATCGAACATATCTTGGTCCACAAGTTCA
CTAGGTTCCTGACGCAGCGCGCGGAATCCTTCTTCATTCTACGGAGAAAG
CCAGTGAAGGGATATGACATTTCATTCCTCATTACGAACTTCCATACTGA
ACAGATGCTGAAACACAAATTGGTGGACTTCATCATTCAATTTCTCAATC
ATTGCGTCCGTACCTTTTGGCTGTTAGATCTTCATTGACGGCAGCACTCG
CGATATCGAACTTCGCTTCTCAAACCTCCGAAAGACAATGTTTGATTAGT
TGAATGCTCGTGCTCGTTTCGTTGCTGAGTCGTTCTTGACACCGTATGGA
GGAAGTGGATAAGGAAATCTCGGAAATGAAGCTCTTCCAATGTCCCCGAA
ATTGAAGCCGCAACTTCTCCGGAACTACTTCTCAACCCCCTTACAATCTC
CCGGAATGAGAACGAGAGGGTCCTTATCGAGCCCAGCGTGAACAGTGTCC
GTGTCAGCATCCGAATCAAGCAGGCAGATGAGATCGAACATATCTTGGTC
CACAAGTTCACTAGGTTCCTGACGCAGCGCGCGGAATCCTTCTTCATTCT
ACGGAGAAAGCCAGTGAAGGGATATGACATTTCATTCCTCATTACGAACT
TCCATACTGAACAGATGCTGAAACACAAATTGGTGGACTTCATCATTCAA
TTTCTCAATCATTGCGTCCGTACCTTTTGGCTGTTAGATCTTCATTGACG
GCAGCACTCGCGATATCGAACTTCGCTTCTCAAACCTCCGAAAGACAATG
TTTGATTAGTTGAATGCTCGTGCTCGTTTCGTTGCTGAGTCGTTCTTGAC
ACCGTATGGAGGAAGTGGATAAGGAAATCTCGGAAATGAAGCTCTTCCAA
TGTCCCCGAAATTGAAGCCGCAACTTCTCCGGAACTACTTCTCAACCCCC
TTACAATCTCCCGGAATGAGAACGAGAGGGTCCTTATCGAGCCCAGCGTG
AACAGTGTCCGTGTCAGCATCCGAATCAAGCAGGCAGATGAGATCGAACA
TATCTTGGTCCACAAGTTCACTAGGTTCCTGACGCAGCGCGCGGAATCCT
TCTTCATTCTACGGAGAAAGCCAGTGAAGGGATATGACATTTCATTCCTC
ATTACGAACTTCCATACTGAACAGATGCTGAAACACAAATTGGTGGACTT
CATCATTCAATTTCTCAATCATTGCGTCCGTACCTTTTGGCTGTTAGATC
TTCATTGACGGCAGCACTCGCGATATCGAACTTCGCTTCTCAAACCTCCG
AAAGACAATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005885Arp2/3 protein complex
GO:0015629actin cytoskeleton
Vocabulary: Biological Process
TermDefinition
GO:0030833regulation of actin filament polymerization
GO:0030041actin filament polymerization
GO:0034314Arp2/3 complex-mediated actin nucleation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ARPC4ATCC64974_34890Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_34890-T1ATCC64974_34890-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_34890-T1.cdsATCC64974_34890-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_34890-T1.exon6ATCC64974_34890-T1.exon6Aspergillus niger N402exon
ATCC64974_34890-T1.exon5ATCC64974_34890-T1.exon5Aspergillus niger N402exon
ATCC64974_34890-T1.exon4ATCC64974_34890-T1.exon4Aspergillus niger N402exon
ATCC64974_34890-T1.exon3ATCC64974_34890-T1.exon3Aspergillus niger N402exon
ATCC64974_34890-T1.exon2ATCC64974_34890-T1.exon2Aspergillus niger N402exon
ATCC64974_34890-T1.exon1ATCC64974_34890-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09265CCT
DBxrefInterPro:IPR034666
DBxrefInterPro:IPR008384
DBxrefPFAM:PF05856
ProductActin- protein 2/3 complex subunit 4
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000005.1supercontigOGUI01000005.1:603635..604439 -
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