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ATCC64974_35460-T1, ATCC64974_35460-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_35460-T1
Unique NameATCC64974_35460-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000005.1:778652..779144-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_35460-T1 ID=ATCC64974_35460-T1|Name=ATCC64974_35460-T1|organism=Aspergillus niger N402|type=mRNA|length=493bp|location=Sequence derived from alignment at OGUI01000005.1:778652..779144- (Aspergillus niger N402)
ATGTCTCGGGCAGGAACTTGGATGAAGATGCTCGGCGTGTAAGGCGCATC
CACTCCCACCTCTTCCGTGCTTGCCGCGCGATTTCTAACGGATAATTAGC
GGCATCGTCATCTGTGTCGGCGGTCCGGCATTCGTCCAATACATCCGTCC
TACTGATGAAGAATTGTTCAAGCGTTACAACCCCGATCTTCAGAAGCGGA
GTCTGGAGGAAGGTGATCGCCGAGCTCGGGAATTCGATGAATATGTTACC
CGGTTGAAGCAATGGTCCAAGTCCGATAAGTCGAGTGCGTTATGGCCTCT
TCCTGTCTTCCACCTCATGTCTTGGATGTTTGTGAGCAGTTATACTGATG
TCATGGTTTGATTAGTTTGGTACGCGGCTCAGGAACAACAGGAACAGAAG
CGCGTGGAGGCTGAGGTACAACGGAACCAGGCCAGGGACGATGCTAAGGT
ACAACGTGAGGAGATGAGAAAGGAACTGCTGGGTGAGAAATAA
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Coding sequence (CDS) from alignment at OGUI01000005.1:778652..779144-

>ATCC64974_35460-T1 ID=ATCC64974_35460-T1|Name=ATCC64974_35460-T1|organism=Aspergillus niger N402|type=CDS|length=1053bp|location=Sequence derived from alignment at OGUI01000005.1:778652..779144- (Aspergillus niger N402)
TTTGGTACGCGGCTCAGGAACAACAGGAACAGAAGCGCGTGGAGGCTGAG
GTACAACGGAACCAGGCCAGGGACGATGCTAAGGTACAACGTGAGGAGAT
GAGAAAGGAACTGCTGGGTGAGAAATAACGGCATCGTCATCTGTGTCGGC
GGTCCGGCATTCGTCCAATACATCCGTCCTACTGATGAAGAATTGTTCAA
GCGTTACAACCCCGATCTTCAGAAGCGGAGTCTGGAGGAAGGTGATCGCC
GAGCTCGGGAATTCGATGAATATGTTACCCGGTTGAAGCAATGGTCCAAG
TCCGATAAGTCGAATGTCTCGGGCAGGAACTTGGATGAAGATGCTCGGCG
TTTTGGTACGCGGCTCAGGAACAACAGGAACAGAAGCGCGTGGAGGCTGA
GGTACAACGGAACCAGGCCAGGGACGATGCTAAGGTACAACGTGAGGAGA
TGAGAAAGGAACTGCTGGGTGAGAAATAACGGCATCGTCATCTGTGTCGG
CGGTCCGGCATTCGTCCAATACATCCGTCCTACTGATGAAGAATTGTTCA
AGCGTTACAACCCCGATCTTCAGAAGCGGAGTCTGGAGGAAGGTGATCGC
CGAGCTCGGGAATTCGATGAATATGTTACCCGGTTGAAGCAATGGTCCAA
GTCCGATAAGTCGAATGTCTCGGGCAGGAACTTGGATGAAGATGCTCGGC
GTTTTGGTACGCGGCTCAGGAACAACAGGAACAGAAGCGCGTGGAGGCTG
AGGTACAACGGAACCAGGCCAGGGACGATGCTAAGGTACAACGTGAGGAG
ATGAGAAAGGAACTGCTGGGTGAGAAATAACGGCATCGTCATCTGTGTCG
GCGGTCCGGCATTCGTCCAATACATCCGTCCTACTGATGAAGAATTGTTC
AAGCGTTACAACCCCGATCTTCAGAAGCGGAGTCTGGAGGAAGGTGATCG
CCGAGCTCGGGAATTCGATGAATATGTTACCCGGTTGAAGCAATGGTCCA
AGTCCGATAAGTCGAATGTCTCGGGCAGGAACTTGGATGAAGATGCTCGG
CGT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBP4ATCC64974_35460Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_35460-T1ATCC64974_35460-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_35460-T1.cdsATCC64974_35460-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_35460-T1.exon3ATCC64974_35460-T1.exon3Aspergillus niger N402exon
ATCC64974_35460-T1.exon2ATCC64974_35460-T1.exon2Aspergillus niger N402exon
ATCC64974_35460-T1.exon1ATCC64974_35460-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR012420
DBxrefPFAM:PF07960
Productassembly factor cbp4
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000005.1supercontigOGUI01000005.1:778652..779144 -
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