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ATCC64974_3550-T1, ATCC64974_3550-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_3550-T1
Unique NameATCC64974_3550-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000001.1:1078181..1079203+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_3550-T1 ID=ATCC64974_3550-T1|Name=ATCC64974_3550-T1|organism=Aspergillus niger N402|type=mRNA|length=1023bp|location=Sequence derived from alignment at OGUI01000001.1:1078181..1079203+ (Aspergillus niger N402)
ATGTCTCTCTCCGCCGCTTCCAGCTCTATCCTGCGCGCTTGCGCCCGGCA
ACAACTGCCCTCTTCTCGCGCCGCCATTGCCTCCTGCCAGCAGCGGAGGG
GAGTCGCTGATGCCTCCAAGTCCACTTTCGATAGCCCCTTCGGCAGCTCC
AAGGAGTACTCTTCCACCCTGAAGATCCCCGATTTCAGCAAATACCAGTC
CAAGAAGCCCCCACGCTCCAACCAGGTCTTCTCTTACTTCATGGCCGGTT
CCCTCGGTCTGGCCTCTGCCGTCGGTGCTAAGGCCACCGTCCAGGGTAGG
TACCCCTGGAGACATTGAATATTGCGCATATACATGAGAAAAGAGGAGGA
AAAACTAGGAGGGGGGGAATATCAGGTTGAACAATGGGAGGGAATGGCTG
TGTGCTTGACCGCTCGGGACAAATCGCTGATATGGAGTTTCTCTCATTAC
TAGACTTCCTGGTCAACATGTCCGCCTCCGCCGATGTCCTCGCCCAGGCT
AAGGTTGAGATTGGCCTTGGTGCCATCCCTGAGGGCAAGAACGTATGTTC
TATATTCTCTTTTCCCCCGAACCAGAAGGCTGGCTCGTCCCCCTTTGCAA
TCCAGCATCTGACCGATTCCGAAACAGGTTATCATCAAGTGGCGTGGTAA
GCCCGTCTTCATCCGTCACCGCACCCAGGACGAGATCCAGGAGGCCCAGA
AGACCGAGTGGCAGTCCCTCCGTGACCCCCAGGCCGACGAGGACCGTGTC
CAGAAGCCCGAGTGGCTTGTCATGCTTGGTACGACATACTCCTCCCCGAC
CCGCCATTGACCTCCCATCTAATATATATCCCCCTATCTAGGTGTCTGCA
CTCACCTTGGTTGTGTCCCCATCGGTGAATCCGGCGACTATGGCGGCTGG
TTCTGCCCCTGCCACGGTTCGCACTACGACATCTCCGGCCGTATAAGAAA
GGGACCCGCTCCCCTCAACCTCGAGGTTCCCCAATACAACTTCCCCTCCG
AGGACACCCTCGTCATCGGTTAA
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Coding sequence (CDS) from alignment at OGUI01000001.1:1078181..1079203+

>ATCC64974_3550-T1 ID=ATCC64974_3550-T1|Name=ATCC64974_3550-T1|organism=Aspergillus niger N402|type=CDS|length=2868bp|location=Sequence derived from alignment at OGUI01000001.1:1078181..1079203+ (Aspergillus niger N402)
ATGTCTCTCTCCGCCGCTTCCAGCTCTATCCTGCGCGCTTGCGCCCGGCA
ACAACTGCCCTCTTCTCGCGCCGCCATTGCCTCCTGCCAGCAGCGGAGGG
GAGTCGCTGATGCCTCCAAGTCCACTTTCGATAGCCCCTTCGGCAGCTCC
AAGGAGTACTCTTCCACCCTGAAGATCCCCGATTTCAGCAAATACCAGTC
CAAGAAGCCCCCACGCTCCAACCAGGTCTTCTCTTACTTCATGGCCGGTT
CCCTCGGTCTGGCCTCTGCCGTCGGTGCTAAGGCCACCGTCCAGGACTTC
CTGGTCAACATGTCCGCCTCCGCCGATGTCCTCGCCCAGGCTAAGGTTGA
GATTGGCCTTGGTGCCATCCCTGAGGGCAAGAACGTTATCATCAAGTGGC
GTGGTAAGCCCGTCTTCATCCGTCACCGCACCCAGGACGAGATCCAGGAG
GCCCAGAAGACCGAGTGGCAGTCCCTCCGTGACCCCCAGGCCGACGAGGA
CCGTGTCCAGAAGCCCGAGTGGCTTGTCATGCTTGGTGTCTGCACTCACC
TTGGTTGTGTCCCCATCGGTGAATCCGGCGACTATGGCGGCTGGTTCTGC
CCCTGCCACGGTTCGCACTACGACATCTCCGGCCGTATAAGAAAGGGACC
CGCTCCCCTCAACCTCGAGGTTCCCCAATACAACTTCCCCTCCGAGGACA
CCCTCGTCATCGGTTAAATGTCTCTCTCCGCCGCTTCCAGCTCTATCCTG
CGCGCTTGCGCCCGGCAACAACTGCCCTCTTCTCGCGCCGCCATTGCCTC
CTGCCAGCAGCGGAGGGGAGTCGCTGATGCCTCCAAGTCCACTTTCGATA
GCCCCTTCGGCAGCTCCAAGGAGTACTCTTCCACCCTGAAGATCCCCGAT
TTCAGCAAATACCAGTCCAAGAAGCCCCCACGCTCCAACCAGGTCTTCTC
TTACTTCATGGCCGGTTCCCTCGGTCTGGCCTCTGCCGTCGGTGCTAAGG
CCACCGTCCAGGACTTCCTGGTCAACATGTCCGCCTCCGCCGATGTCCTC
GCCCAGGCTAAGGTTGAGATTGGCCTTGGTGCCATCCCTGAGGGCAAGAA
CGTTATCATCAAGTGGCGTGGTAAGCCCGTCTTCATCCGTCACCGCACCC
AGGACGAGATCCAGGAGGCCCAGAAGACCGAGTGGCAGTCCCTCCGTGAC
CCCCAGGCCGACGAGGACCGTGTCCAGAAGCCCGAGTGGCTTGTCATGCT
TGGTGTCTGCACTCACCTTGGTTGTGTCCCCATCGGTGAATCCGGCGACT
ATGGCGGCTGGTTCTGCCCCTGCCACGGTTCGCACTACGACATCTCCGGC
CGTATAAGAAAGGGACCCGCTCCCCTCAACCTCGAGGTTCCCCAATACAA
CTTCCCCTCCGAGGACACCCTCGTCATCGGTTAAATGTCTCTCTCCGCCG
CTTCCAGCTCTATCCTGCGCGCTTGCGCCCGGCAACAACTGCCCTCTTCT
CGCGCCGCCATTGCCTCCTGCCAGCAGCGGAGGGGAGTCGCTGATGCCTC
CAAGTCCACTTTCGATAGCCCCTTCGGCAGCTCCAAGGAGTACTCTTCCA
CCCTGAAGATCCCCGATTTCAGCAAATACCAGTCCAAGAAGCCCCCACGC
TCCAACCAGGTCTTCTCTTACTTCATGGCCGGTTCCCTCGGTCTGGCCTC
TGCCGTCGGTGCTAAGGCCACCGTCCAGGACTTCCTGGTCAACATGTCCG
CCTCCGCCGATGTCCTCGCCCAGGCTAAGGTTGAGATTGGCCTTGGTGCC
ATCCCTGAGGGCAAGAACGTTATCATCAAGTGGCGTGGTAAGCCCGTCTT
CATCCGTCACCGCACCCAGGACGAGATCCAGGAGGCCCAGAAGACCGAGT
GGCAGTCCCTCCGTGACCCCCAGGCCGACGAGGACCGTGTCCAGAAGCCC
GAGTGGCTTGTCATGCTTGGTGTCTGCACTCACCTTGGTTGTGTCCCCAT
CGGTGAATCCGGCGACTATGGCGGCTGGTTCTGCCCCTGCCACGGTTCGC
ACTACGACATCTCCGGCCGTATAAGAAAGGGACCCGCTCCCCTCAACCTC
GAGGTTCCCCAATACAACTTCCCCTCCGAGGACACCCTCGTCATCGGTTA
AATGTCTCTCTCCGCCGCTTCCAGCTCTATCCTGCGCGCTTGCGCCCGGC
AACAACTGCCCTCTTCTCGCGCCGCCATTGCCTCCTGCCAGCAGCGGAGG
GGAGTCGCTGATGCCTCCAAGTCCACTTTCGATAGCCCCTTCGGCAGCTC
CAAGGAGTACTCTTCCACCCTGAAGATCCCCGATTTCAGCAAATACCAGT
CCAAGAAGCCCCCACGCTCCAACCAGGTCTTCTCTTACTTCATGGCCGGT
TCCCTCGGTCTGGCCTCTGCCGTCGGTGCTAAGGCCACCGTCCAGGACTT
CCTGGTCAACATGTCCGCCTCCGCCGATGTCCTCGCCCAGGCTAAGGTTG
AGATTGGCCTTGGTGCCATCCCTGAGGGCAAGAACGTTATCATCAAGTGG
CGTGGTAAGCCCGTCTTCATCCGTCACCGCACCCAGGACGAGATCCAGGA
GGCCCAGAAGACCGAGTGGCAGTCCCTCCGTGACCCCCAGGCCGACGAGG
ACCGTGTCCAGAAGCCCGAGTGGCTTGTCATGCTTGGTGTCTGCACTCAC
CTTGGTTGTGTCCCCATCGGTGAATCCGGCGACTATGGCGGCTGGTTCTG
CCCCTGCCACGGTTCGCACTACGACATCTCCGGCCGTATAAGAAAGGGAC
CCGCTCCCCTCAACCTCGAGGTTCCCCAATACAACTTCCCCTCCGAGGAC
ACCCTCGTCATCGGTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:00515372 iron, 2 sulfur cluster binding
GO:0016491oxidoreductase activity
GO:0008121ubiquinol-cytochrome-c reductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_3550ATCC64974_3550Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_3550-T1.exon1ATCC64974_3550-T1.exon1Aspergillus niger N402exon
ATCC64974_3550-T1.exon2ATCC64974_3550-T1.exon2Aspergillus niger N402exon
ATCC64974_3550-T1.exon3ATCC64974_3550-T1.exon3Aspergillus niger N402exon
ATCC64974_3550-T1.exon4ATCC64974_3550-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_3550-T1.cdsATCC64974_3550-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_3550-T1ATCC64974_3550-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264MIL
DBxrefInterPro:IPR006317
DBxrefInterPro:IPR017941
DBxrefInterPro:IPR036922
DBxrefInterPro:IPR037008
DBxrefInterPro:IPR004192
DBxrefInterPro:IPR005805
DBxrefPFAM:PF02921
DBxrefPFAM:PF00355
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000001.1supercontigOGUI01000001.1:1078181..1079203 +
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