You are here

Home

ATCC64974_35520-T1, ATCC64974_35520-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_35520-T1
Unique NameATCC64974_35520-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000005.1:792378..793363+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_35520-T1 ID=ATCC64974_35520-T1|Name=ATCC64974_35520-T1|organism=Aspergillus niger N402|type=mRNA|length=986bp|location=Sequence derived from alignment at OGUI01000005.1:792378..793363+ (Aspergillus niger N402)
ATGTCATACGATATCAAAGATCTATTCAATGTGCGCGGCCTAGTTGCCGT
CATCACTGGCGGGAGCTCCGGTATGTGTCACGGTCACTCTTTGAATCCTC
CAAACAGATAGCTGATGATGCTACTATTGCAGGTCTGGGTAAGACGATGG
CTCTCGCCCTCGCTACCAATGGAGCCAGCAGAGTCTATATCCTGGGCCGC
CACAAAGAGACTCTCGAAGATACAGCCGACTTGCATCCCGGCATTATTAT
CCCTATCGTCGCTGATGTGGGCTCAAAGGCCTCTCTTGCTGCCGCTGCCG
ATCAAATTCATACGGAAACTGGGTACATCAACCTCCTCGTCGCAAATGCA
GGAATGCTCTATATGGACACGCCAGAAGCCATCAGTGTAAAGGTCGGTCG
CTCTTTACAGGAGAATGCGACCCCTGATGAGTTGGAATCGTTCCTCATGG
ATACCCCGGTCGATGAATTCTTGGACACGTTCCGGGTAAACACAACAGGG
GTATTCTACACCATTGCGGCCTTTATATCATTACTGGACAAAGGCAACAA
GCGAGGAAATGTCTTTCAAAAGAGCCAGGTGATTGCTGTGAGCAGTGTAG
CAGCACATAACCGGAGAGTGGTTGGAGGTTGTGCATACGGGATGAGTAAG
GCTGCTGTGATCATGTTAATGAAGAAGATGATGACATACTTGATTCCTCA
CGGGATTCGGGCAAACACAATCTCTCCTGGCCGTGAGTATTTCCATCTTC
AATTTCGAAGTTAGGTACTGATTGGACCAGTGTTCCCAAGCAATCTGTGT
GGAAGCCCAGCCAATGAAGAGATCTCGATTGAAGGCGCGTTTGACCGAGA
GTTCATTCCACTGCAAAGAGCAGGGAGGCGCGAGGAGATTGCTGGAACTA
TTCTGTATCTGGCCAGCAAGGCAGGCGGGTATGTTAATGGGGATTTGCAT
CTGATTGATGGGGGCATGGCAGGATGCAGCAGTTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000005.1:792378..793363+

>ATCC64974_35520-T1 ID=ATCC64974_35520-T1|Name=ATCC64974_35520-T1|organism=Aspergillus niger N402|type=CDS|length=2628bp|location=Sequence derived from alignment at OGUI01000005.1:792378..793363+ (Aspergillus niger N402)
ATGTCATACGATATCAAAGATCTATTCAATGTGCGCGGCCTAGTTGCCGT
CATCACTGGCGGGAGCTCCGGTCTGGGTAAGACGATGGCTCTCGCCCTCG
CTACCAATGGAGCCAGCAGAGTCTATATCCTGGGCCGCCACAAAGAGACT
CTCGAAGATACAGCCGACTTGCATCCCGGCATTATTATCCCTATCGTCGC
TGATGTGGGCTCAAAGGCCTCTCTTGCTGCCGCTGCCGATCAAATTCATA
CGGAAACTGGGTACATCAACCTCCTCGTCGCAAATGCAGGAATGCTCTAT
ATGGACACGCCAGAAGCCATCAGTGTAAAGGTCGGTCGCTCTTTACAGGA
GAATGCGACCCCTGATGAGTTGGAATCGTTCCTCATGGATACCCCGGTCG
ATGAATTCTTGGACACGTTCCGGGTAAACACAACAGGGGTATTCTACACC
ATTGCGGCCTTTATATCATTACTGGACAAAGGCAACAAGCGAGGAAATGT
CTTTCAAAAGAGCCAGGTGATTGCTGTGAGCAGTGTAGCAGCACATAACC
GGAGAGTGGTTGGAGGTTGTGCATACGGGATGAGTAAGGCTGCTGTGATC
ATGTTAATGAAGAAGATGATGACATACTTGATTCCTCACGGGATTCGGGC
AAACACAATCTCTCCTGGCCTGTTCCCAAGCAATCTGTGTGGAAGCCCAG
CCAATGAAGAGATCTCGATTGAAGGCGCGTTTGACCGAGAGTTCATTCCA
CTGCAAAGAGCAGGGAGGCGCGAGGAGATTGCTGGAACTATTCTGTATCT
GGCCAGCAAGGCAGGCGGGTATGTTAATGGGGATTTGCATCTGATTGATG
GGGGCATGGCAGGATGCAGCAGTTGAATGTCATACGATATCAAAGATCTA
TTCAATGTGCGCGGCCTAGTTGCCGTCATCACTGGCGGGAGCTCCGGTCT
GGGTAAGACGATGGCTCTCGCCCTCGCTACCAATGGAGCCAGCAGAGTCT
ATATCCTGGGCCGCCACAAAGAGACTCTCGAAGATACAGCCGACTTGCAT
CCCGGCATTATTATCCCTATCGTCGCTGATGTGGGCTCAAAGGCCTCTCT
TGCTGCCGCTGCCGATCAAATTCATACGGAAACTGGGTACATCAACCTCC
TCGTCGCAAATGCAGGAATGCTCTATATGGACACGCCAGAAGCCATCAGT
GTAAAGGTCGGTCGCTCTTTACAGGAGAATGCGACCCCTGATGAGTTGGA
ATCGTTCCTCATGGATACCCCGGTCGATGAATTCTTGGACACGTTCCGGG
TAAACACAACAGGGGTATTCTACACCATTGCGGCCTTTATATCATTACTG
GACAAAGGCAACAAGCGAGGAAATGTCTTTCAAAAGAGCCAGGTGATTGC
TGTGAGCAGTGTAGCAGCACATAACCGGAGAGTGGTTGGAGGTTGTGCAT
ACGGGATGAGTAAGGCTGCTGTGATCATGTTAATGAAGAAGATGATGACA
TACTTGATTCCTCACGGGATTCGGGCAAACACAATCTCTCCTGGCCTGTT
CCCAAGCAATCTGTGTGGAAGCCCAGCCAATGAAGAGATCTCGATTGAAG
GCGCGTTTGACCGAGAGTTCATTCCACTGCAAAGAGCAGGGAGGCGCGAG
GAGATTGCTGGAACTATTCTGTATCTGGCCAGCAAGGCAGGCGGGTATGT
TAATGGGGATTTGCATCTGATTGATGGGGGCATGGCAGGATGCAGCAGTT
GAATGTCATACGATATCAAAGATCTATTCAATGTGCGCGGCCTAGTTGCC
GTCATCACTGGCGGGAGCTCCGGTCTGGGTAAGACGATGGCTCTCGCCCT
CGCTACCAATGGAGCCAGCAGAGTCTATATCCTGGGCCGCCACAAAGAGA
CTCTCGAAGATACAGCCGACTTGCATCCCGGCATTATTATCCCTATCGTC
GCTGATGTGGGCTCAAAGGCCTCTCTTGCTGCCGCTGCCGATCAAATTCA
TACGGAAACTGGGTACATCAACCTCCTCGTCGCAAATGCAGGAATGCTCT
ATATGGACACGCCAGAAGCCATCAGTGTAAAGGTCGGTCGCTCTTTACAG
GAGAATGCGACCCCTGATGAGTTGGAATCGTTCCTCATGGATACCCCGGT
CGATGAATTCTTGGACACGTTCCGGGTAAACACAACAGGGGTATTCTACA
CCATTGCGGCCTTTATATCATTACTGGACAAAGGCAACAAGCGAGGAAAT
GTCTTTCAAAAGAGCCAGGTGATTGCTGTGAGCAGTGTAGCAGCACATAA
CCGGAGAGTGGTTGGAGGTTGTGCATACGGGATGAGTAAGGCTGCTGTGA
TCATGTTAATGAAGAAGATGATGACATACTTGATTCCTCACGGGATTCGG
GCAAACACAATCTCTCCTGGCCTGTTCCCAAGCAATCTGTGTGGAAGCCC
AGCCAATGAAGAGATCTCGATTGAAGGCGCGTTTGACCGAGAGTTCATTC
CACTGCAAAGAGCAGGGAGGCGCGAGGAGATTGCTGGAACTATTCTGTAT
CTGGCCAGCAAGGCAGGCGGGTATGTTAATGGGGATTTGCATCTGATTGA
TGGGGGCATGGCAGGATGCAGCAGTTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_35520ATCC64974_35520Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_35520-T1.exon1ATCC64974_35520-T1.exon1Aspergillus niger N402exon
ATCC64974_35520-T1.exon2ATCC64974_35520-T1.exon2Aspergillus niger N402exon
ATCC64974_35520-T1.exon3ATCC64974_35520-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_35520-T1.cdsATCC64974_35520-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_35520-T1ATCC64974_35520-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR020904
DBxrefInterPro:IPR002347
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000005.1supercontigOGUI01000005.1:792378..793363 +
Powered by Drupal