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ATCC64974_35790-T1, ATCC64974_35790-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_35790-T1
Unique NameATCC64974_35790-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000005.1:887118..888827+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_35790-T1 ID=ATCC64974_35790-T1|Name=ATCC64974_35790-T1|organism=Aspergillus niger N402|type=mRNA|length=1710bp|location=Sequence derived from alignment at OGUI01000005.1:887118..888827+ (Aspergillus niger N402)
ATGTCGACGACCTCCAAGCGTAAGCGTGCAAGGAAGGCCTGCATTCCATG
CCACCAGCGGAAACGGAAATGCGACAACCAATATCCTTGCAGCATGTGTA
CCACTTACGACTATAACTGCAGATACGACAAGGACCTGACAGGAACTGTG
GGAGAAAGCGTTGATGTCCCACCCCAAGCTAAGCGCATCAGCCTTGATGG
CAGAAGTCGTTTGACCAACCAGCCACACGTAGAGCAAGGCTCCCACGAAG
CCAATAGCTCATCGACAAAAAGTCCCGCCACTGTGACCAGCACATCACCT
GGAATCTTTGACGACAATAAGTGCAGATACACCGGGGCATCAGCGGCCAT
GGCTTTTCCACATGTCCTGGGCGTTAGTCTCGGTGCTGACAGTCCTCCGC
GATTGCGGTCATGCGCCTACAACTTTGGCAACCGACCAGACGAGGCTTCA
AACACCCACAGCTTTCTCGGAGATCTGATCTCCGAGGAGGACGTCGGCTA
CTATGCGGGGGTTTATTTCGCTGTCATGAACCCGATCGGCGACATCTTGG
ACCCAAGAATATTCGCCGATCGATGTCACCAATATTACAACGGCGTTTCT
AGCACAGACATTGCATTTGCTGCTGTGGCTGCTGGCGTAGCCTGCCTCGG
GTCCTTTCTCTCATCCAACAGACATGCACGGGAGACTGACCTGGTGCGAT
ACGCTAAGGCGATTCTCGATGATCCATCGTCAATACGCACGCTAAATATT
GACCACATACTCGCATGGGACATGCGAGCATTCTACCTTCGCGCCACAAG
CCGCCCCAAGAATGCCTGGATTGCCTCCTGTACCGTCATGCACCTGTGTG
AAACAGTTGGGTTGCACGACGAAGCGAGTATCAAGAAGATGGCATCCAAG
GCCGGCTCTGCTGTTCTTGGGCTTGATGCCGACCGACTGAGGAGAATCTT
TTGGGTCTCTTGGGCTGGACACAATATGTTATCCTATGAGCAAGATTGTT
CTGCTGTAAACTTTCGCTATGTGACTTGTCAGTCTTTTGTAGCAACACCA
GGGTCCGTTGCCGACCAGTTCGTCCGATTAGTCCAACTTACCCCAGCCCC
GAACTCCCCGTTTCGTCTCAAATGGGAGCCTTCGAATCTGAGTGAGGAAC
TATTTGAACGTCTAAAAGCAGTGACTGAACTCCAGGTCAAACATCCATTT
TTGGTGGTGACCGCGGCAGACATCGCCTTTTGCTTTTATCGTCGCCTGTA
CCAGGCTCAGACGGGGATCTCAGATGATTTTATCAATCTCGTCATTGATT
GCGGTAACGCAGGGGTTGAGGCAGCCGAGAAGCTCGCTAACGAGGGTCAT
TTATTCTGGAACATCCTTGGCAGCGTCTTCCAATTTGCTTGTGTTCTGTT
GGCTATTGACAGGCCGATTGCCTCCGCTCACATCGGCACTGTCTTCAAGG
GTTTGGAGAACTTAGTCAAGGCGGCCGATACAACACTGACGCGCGAGGCA
TTATCAATAGCACGACATCTACTCAGCCTCAAGACGGCTAGAAAGCGCAA
GGAGCTGGCTGAGCTGGAAGCGATCGAGGCAGGCTATCAATTTGGTCTGA
CACCACCGGGACCAGAGGCCAGTGTCTCTGTGCCTGACATCAGCTGGGAT
CTATACTGGGATCAGTTCTTTATTGAGCCGTATCTGTCGATGCCTGGTGG
AGGTATCTAG
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Coding sequence (CDS) from alignment at OGUI01000005.1:887118..888827+

>ATCC64974_35790-T1 ID=ATCC64974_35790-T1|Name=ATCC64974_35790-T1|organism=Aspergillus niger N402|type=CDS|length=1710bp|location=Sequence derived from alignment at OGUI01000005.1:887118..888827+ (Aspergillus niger N402)
ATGTCGACGACCTCCAAGCGTAAGCGTGCAAGGAAGGCCTGCATTCCATG
CCACCAGCGGAAACGGAAATGCGACAACCAATATCCTTGCAGCATGTGTA
CCACTTACGACTATAACTGCAGATACGACAAGGACCTGACAGGAACTGTG
GGAGAAAGCGTTGATGTCCCACCCCAAGCTAAGCGCATCAGCCTTGATGG
CAGAAGTCGTTTGACCAACCAGCCACACGTAGAGCAAGGCTCCCACGAAG
CCAATAGCTCATCGACAAAAAGTCCCGCCACTGTGACCAGCACATCACCT
GGAATCTTTGACGACAATAAGTGCAGATACACCGGGGCATCAGCGGCCAT
GGCTTTTCCACATGTCCTGGGCGTTAGTCTCGGTGCTGACAGTCCTCCGC
GATTGCGGTCATGCGCCTACAACTTTGGCAACCGACCAGACGAGGCTTCA
AACACCCACAGCTTTCTCGGAGATCTGATCTCCGAGGAGGACGTCGGCTA
CTATGCGGGGGTTTATTTCGCTGTCATGAACCCGATCGGCGACATCTTGG
ACCCAAGAATATTCGCCGATCGATGTCACCAATATTACAACGGCGTTTCT
AGCACAGACATTGCATTTGCTGCTGTGGCTGCTGGCGTAGCCTGCCTCGG
GTCCTTTCTCTCATCCAACAGACATGCACGGGAGACTGACCTGGTGCGAT
ACGCTAAGGCGATTCTCGATGATCCATCGTCAATACGCACGCTAAATATT
GACCACATACTCGCATGGGACATGCGAGCATTCTACCTTCGCGCCACAAG
CCGCCCCAAGAATGCCTGGATTGCCTCCTGTACCGTCATGCACCTGTGTG
AAACAGTTGGGTTGCACGACGAAGCGAGTATCAAGAAGATGGCATCCAAG
GCCGGCTCTGCTGTTCTTGGGCTTGATGCCGACCGACTGAGGAGAATCTT
TTGGGTCTCTTGGGCTGGACACAATATGTTATCCTATGAGCAAGATTGTT
CTGCTGTAAACTTTCGCTATGTGACTTGTCAGTCTTTTGTAGCAACACCA
GGGTCCGTTGCCGACCAGTTCGTCCGATTAGTCCAACTTACCCCAGCCCC
GAACTCCCCGTTTCGTCTCAAATGGGAGCCTTCGAATCTGAGTGAGGAAC
TATTTGAACGTCTAAAAGCAGTGACTGAACTCCAGGTCAAACATCCATTT
TTGGTGGTGACCGCGGCAGACATCGCCTTTTGCTTTTATCGTCGCCTGTA
CCAGGCTCAGACGGGGATCTCAGATGATTTTATCAATCTCGTCATTGATT
GCGGTAACGCAGGGGTTGAGGCAGCCGAGAAGCTCGCTAACGAGGGTCAT
TTATTCTGGAACATCCTTGGCAGCGTCTTCCAATTTGCTTGTGTTCTGTT
GGCTATTGACAGGCCGATTGCCTCCGCTCACATCGGCACTGTCTTCAAGG
GTTTGGAGAACTTAGTCAAGGCGGCCGATACAACACTGACGCGCGAGGCA
TTATCAATAGCACGACATCTACTCAGCCTCAAGACGGCTAGAAAGCGCAA
GGAGCTGGCTGAGCTGGAAGCGATCGAGGCAGGCTATCAATTTGGTCTGA
CACCACCGGGACCAGAGGCCAGTGTCTCTGTGCCTGACATCAGCTGGGAT
CTATACTGGGATCAGTTCTTTATTGAGCCGTATCTGTCGATGCCTGGTGG
AGGTATCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_35790ATCC64974_35790Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_35790-T1.exon1ATCC64974_35790-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_35790-T1.cdsATCC64974_35790-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_35790-T1ATCC64974_35790-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000051.5
NoteEggNog:ENOG41
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR007219
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000005.1supercontigOGUI01000005.1:887118..888827 +
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