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ATCC64974_3600-T1, ATCC64974_3600-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_3600-T1
Unique NameATCC64974_3600-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000001.1:1091298..1092075+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_3600-T1 ID=ATCC64974_3600-T1|Name=ATCC64974_3600-T1|organism=Aspergillus niger N402|type=mRNA|length=778bp|location=Sequence derived from alignment at OGUI01000001.1:1091298..1092075+ (Aspergillus niger N402)
ATGTTCCTTCGTTCCGTTACTCGCGCTGCTGCTCGCAGCTCGGCTGTGCC
CACCACGGGCCTGCGCTCCTACCGCACCGTTTCGGGCCCAATGGCTTGCC
TGAACGCTCGTCCTCAGACTGAGAAGAAGTCTATCGCTCCCCAGCAGACC
CGCGCCGCCTCCGAGCATGCCATCTCGAATCCCACACTCGCCGGTATTGA
GAAGCGCTGGGAGGCCATGCCCCCTCAGGAGCAGGCCGAGCTGTGGATGC
AGCTGAGGGACCGCATGAAGGTCGACTGGCACCAGATGACTCTCCAGGAG
AAGAAGGCCGGTATGCTGTTCTTTCTTGCCCCTTTCCGCTATCTTCCCCG
CGTCCAGCAGAATTTTGCTAACATGGGCCATTTTTTCTTCTTCCCCACGA
TTTAGCCTACTGGATCTCCTTCGGACCCCACGGCCCTCGTTCCGTGCCCC
CCAAGGGCGAGAACCTCAAGATCTTCTTCAAGGTCGCCCAGCTCACCCTC
GTCAGCTTTGGTATTTTCTACGTCATCCACCTGTTCGCCAAGCCCCAGCC
CAAGACCATGACCAAGGAGTGGCAGGAGGCCTCCAATGAGTATGCTAAGG
TATGTGAAATCAACAATCTGCATCAGTTGCTCGCCAATTGGCGTTGGCTG
CACATTGGAACGGTCGCTGATGAGTATTATCACAACAGCAAGAGAAGATC
AACCCTATCTACGGCATCAGCGCCGAGGGTTACGAGGGCAAGGGCTTCGT
CCAGAGCCCCCCTGCTGAGAAGCAATAG
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Coding sequence (CDS) from alignment at OGUI01000001.1:1091298..1092075+

>ATCC64974_3600-T1 ID=ATCC64974_3600-T1|Name=ATCC64974_3600-T1|organism=Aspergillus niger N402|type=CDS|length=1782bp|location=Sequence derived from alignment at OGUI01000001.1:1091298..1092075+ (Aspergillus niger N402)
ATGTTCCTTCGTTCCGTTACTCGCGCTGCTGCTCGCAGCTCGGCTGTGCC
CACCACGGGCCTGCGCTCCTACCGCACCGTTTCGGGCCCAATGGCTTGCC
TGAACGCTCGTCCTCAGACTGAGAAGAAGTCTATCGCTCCCCAGCAGACC
CGCGCCGCCTCCGAGCATGCCATCTCGAATCCCACACTCGCCGGTATTGA
GAAGCGCTGGGAGGCCATGCCCCCTCAGGAGCAGGCCGAGCTGTGGATGC
AGCTGAGGGACCGCATGAAGGTCGACTGGCACCAGATGACTCTCCAGGAG
AAGAAGGCCGCCTACTGGATCTCCTTCGGACCCCACGGCCCTCGTTCCGT
GCCCCCCAAGGGCGAGAACCTCAAGATCTTCTTCAAGGTCGCCCAGCTCA
CCCTCGTCAGCTTTGGTATTTTCTACGTCATCCACCTGTTCGCCAAGCCC
CAGCCCAAGACCATGACCAAGGAGTGGCAGGAGGCCTCCAATGAGTATGC
TAAGCAAGAGAAGATCAACCCTATCTACGGCATCAGCGCCGAGGGTTACG
AGGGCAAGGGCTTCGTCCAGAGCCCCCCTGCTGAGAAGCAATAGATGTTC
CTTCGTTCCGTTACTCGCGCTGCTGCTCGCAGCTCGGCTGTGCCCACCAC
GGGCCTGCGCTCCTACCGCACCGTTTCGGGCCCAATGGCTTGCCTGAACG
CTCGTCCTCAGACTGAGAAGAAGTCTATCGCTCCCCAGCAGACCCGCGCC
GCCTCCGAGCATGCCATCTCGAATCCCACACTCGCCGGTATTGAGAAGCG
CTGGGAGGCCATGCCCCCTCAGGAGCAGGCCGAGCTGTGGATGCAGCTGA
GGGACCGCATGAAGGTCGACTGGCACCAGATGACTCTCCAGGAGAAGAAG
GCCGCCTACTGGATCTCCTTCGGACCCCACGGCCCTCGTTCCGTGCCCCC
CAAGGGCGAGAACCTCAAGATCTTCTTCAAGGTCGCCCAGCTCACCCTCG
TCAGCTTTGGTATTTTCTACGTCATCCACCTGTTCGCCAAGCCCCAGCCC
AAGACCATGACCAAGGAGTGGCAGGAGGCCTCCAATGAGTATGCTAAGCA
AGAGAAGATCAACCCTATCTACGGCATCAGCGCCGAGGGTTACGAGGGCA
AGGGCTTCGTCCAGAGCCCCCCTGCTGAGAAGCAATAGATGTTCCTTCGT
TCCGTTACTCGCGCTGCTGCTCGCAGCTCGGCTGTGCCCACCACGGGCCT
GCGCTCCTACCGCACCGTTTCGGGCCCAATGGCTTGCCTGAACGCTCGTC
CTCAGACTGAGAAGAAGTCTATCGCTCCCCAGCAGACCCGCGCCGCCTCC
GAGCATGCCATCTCGAATCCCACACTCGCCGGTATTGAGAAGCGCTGGGA
GGCCATGCCCCCTCAGGAGCAGGCCGAGCTGTGGATGCAGCTGAGGGACC
GCATGAAGGTCGACTGGCACCAGATGACTCTCCAGGAGAAGAAGGCCGCC
TACTGGATCTCCTTCGGACCCCACGGCCCTCGTTCCGTGCCCCCCAAGGG
CGAGAACCTCAAGATCTTCTTCAAGGTCGCCCAGCTCACCCTCGTCAGCT
TTGGTATTTTCTACGTCATCCACCTGTTCGCCAAGCCCCAGCCCAAGACC
ATGACCAAGGAGTGGCAGGAGGCCTCCAATGAGTATGCTAAGCAAGAGAA
GATCAACCCTATCTACGGCATCAGCGCCGAGGGTTACGAGGGCAAGGGCT
TCGTCCAGAGCCCCCCTGCTGAGAAGCAATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004129cytochrome-c oxidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
COX5ATCC64974_3600Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_3600-T1.exon1ATCC64974_3600-T1.exon1Aspergillus niger N402exon
ATCC64974_3600-T1.exon2ATCC64974_3600-T1.exon2Aspergillus niger N402exon
ATCC64974_3600-T1.exon3ATCC64974_3600-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_3600-T1.cdsATCC64974_3600-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_3600-T1ATCC64974_3600-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036639
DBxrefInterPro:IPR004203
DBxrefPFAM:PF02936
ProductCytochrome c oxidase subunit 5
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000001.1supercontigOGUI01000001.1:1091298..1092075 +
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