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ATCC64974_3630-T1, ATCC64974_3630-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_3630-T1
Unique NameATCC64974_3630-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000001.1:1100290..1102145-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_3630-T1 ID=ATCC64974_3630-T1|Name=ATCC64974_3630-T1|organism=Aspergillus niger N402|type=mRNA|length=1856bp|location=Sequence derived from alignment at OGUI01000001.1:1100290..1102145- (Aspergillus niger N402)
ATGCTTCTCGACAAGCTCTCTGTTCTCTCTTTCCTGGGCCTGGCGCCCAT
CTTTGCTGCTGCGCAGCTCTCCGGTTCCGTGGGACCGCTGACATCCGCGT
CCACCAAGGCAGCTACCAAGACTTGCAACGTTTTGGACTACGGTGCTAAG
GCGGATAAGTCTACTGATCTGGGCGCGCCGTTGGCATCTGCCTTCGCTGA
CTGCAAGTCTGGCGGTCTCGTCTATGTCCCCTCTGGTGACTATGCTCTCT
CCACTTGGGCGAGGTTGAGCGGTGGTGAGGCATGGGCTCTGCAGATCGAT
GGAATCATCTACCGTACTGGCACGGACGGCGGCAACATGATCTATATCGA
GCACTCTAGCGACTTCGAACTTTTCAGTAGCACCTCCGAAGGTGCCATGC
AGGGTCTGGGCTACGAGTTCCATGCCGATGATAACTGGAGCGGCCCTCGT
CTGCTGCGACTCTATGAAGTTACTGACTTCTCGGTCCACGATTTCATCCT
GGTTGACTCTCCCTCTTTCCACTTCTCTCTCGACACTTGCACCAATGGCG
AAATCTACAACATGGCAATCCGCGGCGGTAACCATGGTGGTCTGGATGGT
ATTGATGTCTGGAGTAACAACATCTGGGTCCACGATGTGAGTACCGAAGA
GCATAACGTTTCCATACAGGTTATTAATTAGTCCGATAGGTCGAGGTGAC
GAACAAGGACGAGTGTGTCACAGTCAAGGTAAGACCCTGATGAGTGCCCG
AGCAGGAAGCTTCAGGCTAACAATCAATAATAGAGCCCATCGAAGAACAT
CCTCATTGAGAGCATCTACTGCAACTGGAGTGGTGGCTGTGGTATGGGCT
CGTTTGGCTCTGATACCAATGTTAGCGACATCACTTACCGCAACATCTAC
ACCTGGAGCTCGAACAACATGATGTTGATCAAGAGCAACGGAGGTAGCGG
CTTCGTCGAGAATGTCCTCCTCGAGAACTTCATTGGTGAGTGATATCTTA
TGCAAAATTATTGGTCTTGACGGGACTAACCGAGGACTCTTTCTGTTGGT
AAACAGGACACGGCAACGCTTACTCTCTGGATATCGACAGCTACTGGGCC
AGTATGAGCGCGGTGGACGGCGATGGTGTCCAGCTGAGCAACATCACCGT
GAAGAACTGGAAGGGAACCGAAGCTTACGGTGCTGAGCGTGGTCCTGTCA
AGGTGGTCTGTGCTGATGGTGCCCCTTGCTACGACATTACCATTGAGGAC
TTCGCCATGTGGACCGAGGAGGGTGATAGTCAGTGGTACTCTTGTGAGAG
TGCTTATGGCAGCGGATACTGCCTTCAGGACAGCGATGACCACGTCTCTT
ACTCGGTCACCACTTCTACAGTCAGCTCCGCTCCCTCGGGCTACTCTGCG
ACCTCCATGGCCGCCGATCTGACCACTGACTTCGGCTCTACTGTCTCTAT
CCCCATCCCGACCATCCCTACCTCTTTCTACCCGGGTGCCACCCCCTACA
GTGCTCTGATGGCCAACAGCGCTTCTACTGCCGCTGCTTCTTCCATTGCC
AGCCATGCCACTGTCCATAGCAGCAGCGCTTCCGTTGCTGCTTCTGTGCC
CAGCGCTGTCGCCCCTAGCGAGAGCATCCCCGCCGCCACTTCCGCCGTGG
TATCCAGCGCTGCTGCCATTGCCCCCAGCCCCGCTGTGGGTGCCCAGGAG
GGGTCTACCACCTCCGCTCCCAGCTTTGCTGCCCCCAGTGGTGCTGGAAA
CTCTCCCCAGGGTCCCACCGGAGCTTCTGGATTCGGCGAAAAGGGCCAGC
AGGGTGAGCAGGGTGAACAGGGCGAACAGGGCGAGCAGGGTGTCTGCTAC
GTGTAA
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Coding sequence (CDS) from alignment at OGUI01000001.1:1100290..1102145-

>ATCC64974_3630-T1 ID=ATCC64974_3630-T1|Name=ATCC64974_3630-T1|organism=Aspergillus niger N402|type=CDS|length=6708bp|location=Sequence derived from alignment at OGUI01000001.1:1100290..1102145- (Aspergillus niger N402)
GACACGGCAACGCTTACTCTCTGGATATCGACAGCTACTGGGCCAGTATG
AGCGCGGTGGACGGCGATGGTGTCCAGCTGAGCAACATCACCGTGAAGAA
CTGGAAGGGAACCGAAGCTTACGGTGCTGAGCGTGGTCCTGTCAAGGTGG
TCTGTGCTGATGGTGCCCCTTGCTACGACATTACCATTGAGGACTTCGCC
ATGTGGACCGAGGAGGGTGATAGTCAGTGGTACTCTTGTGAGAGTGCTTA
TGGCAGCGGATACTGCCTTCAGGACAGCGATGACCACGTCTCTTACTCGG
TCACCACTTCTACAGTCAGCTCCGCTCCCTCGGGCTACTCTGCGACCTCC
ATGGCCGCCGATCTGACCACTGACTTCGGCTCTACTGTCTCTATCCCCAT
CCCGACCATCCCTACCTCTTTCTACCCGGGTGCCACCCCCTACAGTGCTC
TGATGGCCAACAGCGCTTCTACTGCCGCTGCTTCTTCCATTGCCAGCCAT
GCCACTGTCCATAGCAGCAGCGCTTCCGTTGCTGCTTCTGTGCCCAGCGC
TGTCGCCCCTAGCGAGAGCATCCCCGCCGCCACTTCCGCCGTGGTATCCA
GCGCTGCTGCCATTGCCCCCAGCCCCGCTGTGGGTGCCCAGGAGGGGTCT
ACCACCTCCGCTCCCAGCTTTGCTGCCCCCAGTGGTGCTGGAAACTCTCC
CCAGGGTCCCACCGGAGCTTCTGGATTCGGCGAAAAGGGCCAGCAGGGTG
AGCAGGGTGAACAGGGCGAACAGGGCGAGCAGGGTGTCTGCTACGTGTAA
AGCCCATCGAAGAACATCCTCATTGAGAGCATCTACTGCAACTGGAGTGG
TGGCTGTGGTATGGGCTCGTTTGGCTCTGATACCAATGTTAGCGACATCA
CTTACCGCAACATCTACACCTGGAGCTCGAACAACATGATGTTGATCAAG
AGCAACGGAGGTAGCGGCTTCGTCGAGAATGTCCTCCTCGAGAACTTCAT
TGGTCGAGGTGACGAACAAGGACGAGTGTGTCACAGTCAAGATGCTTCTC
GACAAGCTCTCTGTTCTCTCTTTCCTGGGCCTGGCGCCCATCTTTGCTGC
TGCGCAGCTCTCCGGTTCCGTGGGACCGCTGACATCCGCGTCCACCAAGG
CAGCTACCAAGACTTGCAACGTTTTGGACTACGGTGCTAAGGCGGATAAG
TCTACTGATCTGGGCGCGCCGTTGGCATCTGCCTTCGCTGACTGCAAGTC
TGGCGGTCTCGTCTATGTCCCCTCTGGTGACTATGCTCTCTCCACTTGGG
CGAGGTTGAGCGGTGGTGAGGCATGGGCTCTGCAGATCGATGGAATCATC
TACCGTACTGGCACGGACGGCGGCAACATGATCTATATCGAGCACTCTAG
CGACTTCGAACTTTTCAGTAGCACCTCCGAAGGTGCCATGCAGGGTCTGG
GCTACGAGTTCCATGCCGATGATAACTGGAGCGGCCCTCGTCTGCTGCGA
CTCTATGAAGTTACTGACTTCTCGGTCCACGATTTCATCCTGGTTGACTC
TCCCTCTTTCCACTTCTCTCTCGACACTTGCACCAATGGCGAAATCTACA
ACATGGCAATCCGCGGCGGTAACCATGGTGGTCTGGATGGTATTGATGTC
TGGAGTAACAACATCTGGGTCCACGATGACACGGCAACGCTTACTCTCTG
GATATCGACAGCTACTGGGCCAGTATGAGCGCGGTGGACGGCGATGGTGT
CCAGCTGAGCAACATCACCGTGAAGAACTGGAAGGGAACCGAAGCTTACG
GTGCTGAGCGTGGTCCTGTCAAGGTGGTCTGTGCTGATGGTGCCCCTTGC
TACGACATTACCATTGAGGACTTCGCCATGTGGACCGAGGAGGGTGATAG
TCAGTGGTACTCTTGTGAGAGTGCTTATGGCAGCGGATACTGCCTTCAGG
ACAGCGATGACCACGTCTCTTACTCGGTCACCACTTCTACAGTCAGCTCC
GCTCCCTCGGGCTACTCTGCGACCTCCATGGCCGCCGATCTGACCACTGA
CTTCGGCTCTACTGTCTCTATCCCCATCCCGACCATCCCTACCTCTTTCT
ACCCGGGTGCCACCCCCTACAGTGCTCTGATGGCCAACAGCGCTTCTACT
GCCGCTGCTTCTTCCATTGCCAGCCATGCCACTGTCCATAGCAGCAGCGC
TTCCGTTGCTGCTTCTGTGCCCAGCGCTGTCGCCCCTAGCGAGAGCATCC
CCGCCGCCACTTCCGCCGTGGTATCCAGCGCTGCTGCCATTGCCCCCAGC
CCCGCTGTGGGTGCCCAGGAGGGGTCTACCACCTCCGCTCCCAGCTTTGC
TGCCCCCAGTGGTGCTGGAAACTCTCCCCAGGGTCCCACCGGAGCTTCTG
GATTCGGCGAAAAGGGCCAGCAGGGTGAGCAGGGTGAACAGGGCGAACAG
GGCGAGCAGGGTGTCTGCTACGTGTAAAGCCCATCGAAGAACATCCTCAT
TGAGAGCATCTACTGCAACTGGAGTGGTGGCTGTGGTATGGGCTCGTTTG
GCTCTGATACCAATGTTAGCGACATCACTTACCGCAACATCTACACCTGG
AGCTCGAACAACATGATGTTGATCAAGAGCAACGGAGGTAGCGGCTTCGT
CGAGAATGTCCTCCTCGAGAACTTCATTGGTCGAGGTGACGAACAAGGAC
GAGTGTGTCACAGTCAAGATGCTTCTCGACAAGCTCTCTGTTCTCTCTTT
CCTGGGCCTGGCGCCCATCTTTGCTGCTGCGCAGCTCTCCGGTTCCGTGG
GACCGCTGACATCCGCGTCCACCAAGGCAGCTACCAAGACTTGCAACGTT
TTGGACTACGGTGCTAAGGCGGATAAGTCTACTGATCTGGGCGCGCCGTT
GGCATCTGCCTTCGCTGACTGCAAGTCTGGCGGTCTCGTCTATGTCCCCT
CTGGTGACTATGCTCTCTCCACTTGGGCGAGGTTGAGCGGTGGTGAGGCA
TGGGCTCTGCAGATCGATGGAATCATCTACCGTACTGGCACGGACGGCGG
CAACATGATCTATATCGAGCACTCTAGCGACTTCGAACTTTTCAGTAGCA
CCTCCGAAGGTGCCATGCAGGGTCTGGGCTACGAGTTCCATGCCGATGAT
AACTGGAGCGGCCCTCGTCTGCTGCGACTCTATGAAGTTACTGACTTCTC
GGTCCACGATTTCATCCTGGTTGACTCTCCCTCTTTCCACTTCTCTCTCG
ACACTTGCACCAATGGCGAAATCTACAACATGGCAATCCGCGGCGGTAAC
CATGGTGGTCTGGATGGTATTGATGTCTGGAGTAACAACATCTGGGTCCA
CGATGACACGGCAACGCTTACTCTCTGGATATCGACAGCTACTGGGCCAG
TATGAGCGCGGTGGACGGCGATGGTGTCCAGCTGAGCAACATCACCGTGA
AGAACTGGAAGGGAACCGAAGCTTACGGTGCTGAGCGTGGTCCTGTCAAG
GTGGTCTGTGCTGATGGTGCCCCTTGCTACGACATTACCATTGAGGACTT
CGCCATGTGGACCGAGGAGGGTGATAGTCAGTGGTACTCTTGTGAGAGTG
CTTATGGCAGCGGATACTGCCTTCAGGACAGCGATGACCACGTCTCTTAC
TCGGTCACCACTTCTACAGTCAGCTCCGCTCCCTCGGGCTACTCTGCGAC
CTCCATGGCCGCCGATCTGACCACTGACTTCGGCTCTACTGTCTCTATCC
CCATCCCGACCATCCCTACCTCTTTCTACCCGGGTGCCACCCCCTACAGT
GCTCTGATGGCCAACAGCGCTTCTACTGCCGCTGCTTCTTCCATTGCCAG
CCATGCCACTGTCCATAGCAGCAGCGCTTCCGTTGCTGCTTCTGTGCCCA
GCGCTGTCGCCCCTAGCGAGAGCATCCCCGCCGCCACTTCCGCCGTGGTA
TCCAGCGCTGCTGCCATTGCCCCCAGCCCCGCTGTGGGTGCCCAGGAGGG
GTCTACCACCTCCGCTCCCAGCTTTGCTGCCCCCAGTGGTGCTGGAAACT
CTCCCCAGGGTCCCACCGGAGCTTCTGGATTCGGCGAAAAGGGCCAGCAG
GGTGAGCAGGGTGAACAGGGCGAACAGGGCGAGCAGGGTGTCTGCTACGT
GTAAAGCCCATCGAAGAACATCCTCATTGAGAGCATCTACTGCAACTGGA
GTGGTGGCTGTGGTATGGGCTCGTTTGGCTCTGATACCAATGTTAGCGAC
ATCACTTACCGCAACATCTACACCTGGAGCTCGAACAACATGATGTTGAT
CAAGAGCAACGGAGGTAGCGGCTTCGTCGAGAATGTCCTCCTCGAGAACT
TCATTGGTCGAGGTGACGAACAAGGACGAGTGTGTCACAGTCAAGATGCT
TCTCGACAAGCTCTCTGTTCTCTCTTTCCTGGGCCTGGCGCCCATCTTTG
CTGCTGCGCAGCTCTCCGGTTCCGTGGGACCGCTGACATCCGCGTCCACC
AAGGCAGCTACCAAGACTTGCAACGTTTTGGACTACGGTGCTAAGGCGGA
TAAGTCTACTGATCTGGGCGCGCCGTTGGCATCTGCCTTCGCTGACTGCA
AGTCTGGCGGTCTCGTCTATGTCCCCTCTGGTGACTATGCTCTCTCCACT
TGGGCGAGGTTGAGCGGTGGTGAGGCATGGGCTCTGCAGATCGATGGAAT
CATCTACCGTACTGGCACGGACGGCGGCAACATGATCTATATCGAGCACT
CTAGCGACTTCGAACTTTTCAGTAGCACCTCCGAAGGTGCCATGCAGGGT
CTGGGCTACGAGTTCCATGCCGATGATAACTGGAGCGGCCCTCGTCTGCT
GCGACTCTATGAAGTTACTGACTTCTCGGTCCACGATTTCATCCTGGTTG
ACTCTCCCTCTTTCCACTTCTCTCTCGACACTTGCACCAATGGCGAAATC
TACAACATGGCAATCCGCGGCGGTAACCATGGTGGTCTGGATGGTATTGA
TGTCTGGAGTAACAACATCTGGGTCCACGATGACACGGCAACGCTTACTC
TCTGGATATCGACAGCTACTGGGCCAGTATGAGCGCGGTGGACGGCGATG
GTGTCCAGCTGAGCAACATCACCGTGAAGAACTGGAAGGGAACCGAAGCT
TACGGTGCTGAGCGTGGTCCTGTCAAGGTGGTCTGTGCTGATGGTGCCCC
TTGCTACGACATTACCATTGAGGACTTCGCCATGTGGACCGAGGAGGGTG
ATAGTCAGTGGTACTCTTGTGAGAGTGCTTATGGCAGCGGATACTGCCTT
CAGGACAGCGATGACCACGTCTCTTACTCGGTCACCACTTCTACAGTCAG
CTCCGCTCCCTCGGGCTACTCTGCGACCTCCATGGCCGCCGATCTGACCA
CTGACTTCGGCTCTACTGTCTCTATCCCCATCCCGACCATCCCTACCTCT
TTCTACCCGGGTGCCACCCCCTACAGTGCTCTGATGGCCAACAGCGCTTC
TACTGCCGCTGCTTCTTCCATTGCCAGCCATGCCACTGTCCATAGCAGCA
GCGCTTCCGTTGCTGCTTCTGTGCCCAGCGCTGTCGCCCCTAGCGAGAGC
ATCCCCGCCGCCACTTCCGCCGTGGTATCCAGCGCTGCTGCCATTGCCCC
CAGCCCCGCTGTGGGTGCCCAGGAGGGGTCTACCACCTCCGCTCCCAGCT
TTGCTGCCCCCAGTGGTGCTGGAAACTCTCCCCAGGGTCCCACCGGAGCT
TCTGGATTCGGCGAAAAGGGCCAGCAGGGTGAGCAGGGTGAACAGGGCGA
ACAGGGCGAGCAGGGTGTCTGCTACGTGTAAAGCCCATCGAAGAACATCC
TCATTGAGAGCATCTACTGCAACTGGAGTGGTGGCTGTGGTATGGGCTCG
TTTGGCTCTGATACCAATGTTAGCGACATCACTTACCGCAACATCTACAC
CTGGAGCTCGAACAACATGATGTTGATCAAGAGCAACGGAGGTAGCGGCT
TCGTCGAGAATGTCCTCCTCGAGAACTTCATTGGTCGAGGTGACGAACAA
GGACGAGTGTGTCACAGTCAAGATGCTTCTCGACAAGCTCTCTGTTCTCT
CTTTCCTGGGCCTGGCGCCCATCTTTGCTGCTGCGCAGCTCTCCGGTTCC
GTGGGACCGCTGACATCCGCGTCCACCAAGGCAGCTACCAAGACTTGCAA
CGTTTTGGACTACGGTGCTAAGGCGGATAAGTCTACTGATCTGGGCGCGC
CGTTGGCATCTGCCTTCGCTGACTGCAAGTCTGGCGGTCTCGTCTATGTC
CCCTCTGGTGACTATGCTCTCTCCACTTGGGCGAGGTTGAGCGGTGGTGA
GGCATGGGCTCTGCAGATCGATGGAATCATCTACCGTACTGGCACGGACG
GCGGCAACATGATCTATATCGAGCACTCTAGCGACTTCGAACTTTTCAGT
AGCACCTCCGAAGGTGCCATGCAGGGTCTGGGCTACGAGTTCCATGCCGA
TGATAACTGGAGCGGCCCTCGTCTGCTGCGACTCTATGAAGTTACTGACT
TCTCGGTCCACGATTTCATCCTGGTTGACTCTCCCTCTTTCCACTTCTCT
CTCGACACTTGCACCAATGGCGAAATCTACAACATGGCAATCCGCGGCGG
TAACCATGGTGGTCTGGATGGTATTGATGTCTGGAGTAACAACATCTGGG
TCCACGAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_3630ATCC64974_3630Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_3630-T1ATCC64974_3630-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_3630-T1.cdsATCC64974_3630-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_3630-T1.exon4ATCC64974_3630-T1.exon4Aspergillus niger N402exon
ATCC64974_3630-T1.exon3ATCC64974_3630-T1.exon3Aspergillus niger N402exon
ATCC64974_3630-T1.exon2ATCC64974_3630-T1.exon2Aspergillus niger N402exon
ATCC64974_3630-T1.exon1ATCC64974_3630-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-21)
NoteCAZy:GH28
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR000743
DBxrefInterPro:IPR012334
DBxrefPFAM:PF00295
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000001.1supercontigOGUI01000001.1:1100290..1102145 -
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