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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000005.1:1224035..1226074+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_36940-T1 ID=ATCC64974_36940-T1|Name=ATCC64974_36940-T1|organism=Aspergillus niger N402|type=mRNA|length=2040bp|location=Sequence derived from alignment at OGUI01000005.1:1224035..1226074+ (Aspergillus niger N402)
ATGTCTCACGAGCTTCGAGTCCTGCCCCCAGGTGCGGGCTATGGAATCGT
CATCGGCATCGGTGGCATCTTCGCCCTATTCATGCTCGGTATCTCCTGGC
TACAGAATCGCTATACGCAGTTCTCCACCCATCGCGCCGAAGAATTCAAC
ACCGCCTCACGATCCGTCAAGCCGGGCTTGATCTCCGCTGGCATTGTCTC
CTCCTGGACATGGTCAGCTACACTCCTAACCAGTTCGACTTTTGCATATT
CCTATGGTGTCTGCGGACCCATGTGGTACGGTGCTATCGGCACCCTGCAG
ATCCTTCTGTTTGCCCTGATTGCGGTCAAAATCAAAGCCAATGCACCGGG
CGCACACACCATGCCGGAGATTGTCCTCGCTCGACACGGCAAGGTTGCTC
ATCTCACGTACTTGTACAATGGTCTGGCTACGAATATGCTGGTTAGTGCG
TGTTTGGTGCTAGGTGGCGCGCAGGTGGTGGCGGCACTCACGGGGATGAA
TGTGTATGCTGCCAATTTCCTTATTCCTGCCGTAGTCGCGGCGTATGTTA
TCGTCGGTGGATTGCGCGCGACTTTCATCGCGGATTATACTCATACCGTT
ATTCTGTTTATCGCGATATTGGTGTTTGGGTTTTCGGTCTCGGCTACCAG
TGACCTCATTGGAAGCCCTGGAAAGTTGTACGATTTGCTGCAGGAGGCGT
CGCGGAATATGCCGATTGATCGGAATACTGATGGGTCGTATCTTGCGTTT
CGGTCCGTTGGTGGTCTGATCTTCGCGGTTGACATATTTGTCTCTGGGTT
CAGTACTGTCTGGCTCGACCAAGCCTATTGGCAGCGAGCAATTGCGTCGC
GACCTGAATCTTCCGTGAAGGCATACATGCTAGGAGGTGTTGCATGGTAT
GGTGAGTACCAGGGTCTTCAAGAATTCCATGTCTTTTACTGGATACTGAT
AACCTTAGGCATTCCGTTCGGCTTTGCTACGGCCATGGGTCTCGGTTGTG
CGGCTCTTACCAACAACCCAGCCTTTCCCACATACCCCAACCCATTATCA
GCTTCTCAAGTCGACGCCGGACTTTCCGCCCCAGCAACCGCAATCACCCT
CCTAGGGAAAGGCGGCGCCGTGCTCATGCTCATCCTCCTGTTCATGGCAG
TGACTAGTTCCACATCCGCTGAACTCATCGCTGTCTCCTCCCTACTCACC
TTTGATGTGTACAAAACCTACATCCGCCCGAACACCGACTCTGCGACACT
CGTGCGCGTCAGCCACTGGGGCATTGTCATCTATGCCATTATCCTCGCCG
CGTTCTGCAGTATCCTCAATGCTGCAGGCGTCAGCCTCACCTGGTTACTA
ACAGTGCTGGGAGTCATCGTCGGCGGAGCAGCAATTCCCGTGGGACTTAT
TCTGCTCTGGGACCGCATGTCCACTGTTGCGGCTATTGCAGCTCCATGGA
TTGGATTTGGCTTGGGTATCATCGTCTGGTTCATCACTTCGTGGAAGCGA
TCGGGCGGCATCAGTGTTGCGACGACGGGCGATGCCACAAATGCCGTAGC
TGGAAACTTGGCCTCGTTTGGGGTGGGCACTATTTCCGCTGTGCTTTTGA
GCTTGATATTTCCAGGAAAGCGCAGACACGACACGTCGGCAACGAATAGT
ATCACAGGAGTCCCTGTCGAACCAGAGAAGACCTCGACAGAGGCATCAGC
CAAGAAGGATAATGATACCGAAATAGTCACAACAATGGCAACCCCGACTG
ACCCCATCACGCAGCCGAAGAACGATATAATTGAGTACCTCGAAACCGAG
ACCATTGAGCCCATGGATCCTGCTCTGGTTAAGAAGGCGGAGCGATTTGC
TTGGACAGCGAATGCTATTTTTATTGCGATTGCAGTGATACTTGTTCCTT
TCACTTTGTTCGGGACGAGGTATGTGTACAACAGAGAGTTCTTTACGGGG
TGGGTTGTCGTCTCCTTTATTTGGGTCTGGGCGAGTGTGCTCATCTGTGT
GATATATCCGGTGGTAAGTGGTCACGCTTTCGAGAAATGA back to topCoding sequence (CDS) from alignment at OGUI01000005.1:1224035..1226074+ >ATCC64974_36940-T1 ID=ATCC64974_36940-T1|Name=ATCC64974_36940-T1|organism=Aspergillus niger N402|type=CDS|length=2040bp|location=Sequence derived from alignment at OGUI01000005.1:1224035..1226074+ (Aspergillus niger N402)
ATGTCTCACGAGCTTCGAGTCCTGCCCCCAGGTGCGGGCTATGGAATCGT
CATCGGCATCGGTGGCATCTTCGCCCTATTCATGCTCGGTATCTCCTGGC
TACAGAATCGCTATACGCAGTTCTCCACCCATCGCGCCGAAGAATTCAAC
ACCGCCTCACGATCCGTCAAGCCGGGCTTGATCTCCGCTGGCATTGTCTC
CTCCTGGACATGGTCAGCTACACTCCTAACCAGTTCGACTTTTGCATATT
CCTATGGTGTCTGCGGACCCATGTGGTACGGTGCTATCGGCACCCTGCAG
ATCCTTCTGTTTGCCCTGATTGCGGTCAAAATCAAAGCCAATGCACCGGG
CGCACACACCATGCCGGAGATTGTCCTCGCTCGACACGGCAAGGTTGCTC
ATCTCACGTACTTGTACAATGGTCTGGCTACGAATATGCTGGTTAGTGCG
TGTTTGGTGCTAGGTGGCGCGCAGGTGGTGGCGGCACTCACGGGGATGAA
TGTGTATGCTGCCAATTTCCTTATTCCTGCCGTAGTCGCGGCGTATGTTA
TCGTCGGTGGATTGCGCGCGACTTTCATCGCGGATTATACTCATACCGTT
ATTCTGTTTATCGCGATATTGGTGTTTGGGTTTTCGGTCTCGGCTACCAG
TGACCTCATTGGAAGCCCTGGAAAGTTGTACGATTTGCTGCAGGAGGCGT
CGCGGAATATGCCGATTGATCGGAATACTGATGGGTCGTATCTTGCGTTT
CGGTCCGTTGGTGGTCTGATCTTCGCGGTTGACATATTTGTCTCTGGGTT
CAGTACTGTCTGGCTCGACCAAGCCTATTGGCAGCGAGCAATTGCGTCGC
GACCTGAATCTTCCGTGAAGGCATACATGCTAGGAGGTGTTGCATGGTAT
GGTGAGTACCAGGGTCTTCAAGAATTCCATGTCTTTTACTGGATACTGAT
AACCTTAGGCATTCCGTTCGGCTTTGCTACGGCCATGGGTCTCGGTTGTG
CGGCTCTTACCAACAACCCAGCCTTTCCCACATACCCCAACCCATTATCA
GCTTCTCAAGTCGACGCCGGACTTTCCGCCCCAGCAACCGCAATCACCCT
CCTAGGGAAAGGCGGCGCCGTGCTCATGCTCATCCTCCTGTTCATGGCAG
TGACTAGTTCCACATCCGCTGAACTCATCGCTGTCTCCTCCCTACTCACC
TTTGATGTGTACAAAACCTACATCCGCCCGAACACCGACTCTGCGACACT
CGTGCGCGTCAGCCACTGGGGCATTGTCATCTATGCCATTATCCTCGCCG
CGTTCTGCAGTATCCTCAATGCTGCAGGCGTCAGCCTCACCTGGTTACTA
ACAGTGCTGGGAGTCATCGTCGGCGGAGCAGCAATTCCCGTGGGACTTAT
TCTGCTCTGGGACCGCATGTCCACTGTTGCGGCTATTGCAGCTCCATGGA
TTGGATTTGGCTTGGGTATCATCGTCTGGTTCATCACTTCGTGGAAGCGA
TCGGGCGGCATCAGTGTTGCGACGACGGGCGATGCCACAAATGCCGTAGC
TGGAAACTTGGCCTCGTTTGGGGTGGGCACTATTTCCGCTGTGCTTTTGA
GCTTGATATTTCCAGGAAAGCGCAGACACGACACGTCGGCAACGAATAGT
ATCACAGGAGTCCCTGTCGAACCAGAGAAGACCTCGACAGAGGCATCAGC
CAAGAAGGATAATGATACCGAAATAGTCACAACAATGGCAACCCCGACTG
ACCCCATCACGCAGCCGAAGAACGATATAATTGAGTACCTCGAAACCGAG
ACCATTGAGCCCATGGATCCTGCTCTGGTTAAGAAGGCGGAGCGATTTGC
TTGGACAGCGAATGCTATTTTTATTGCGATTGCAGTGATACTTGTTCCTT
TCACTTTGTTCGGGACGAGGTATGTGTACAACAGAGAGTTCTTTACGGGG
TGGGTTGTCGTCTCCTTTATTTGGGTCTGGGCGAGTGTGCTCATCTGTGT
GATATATCCGGTGGTAAGTGGTCACGCTTTCGAGAAATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_36940-T1 | ATCC64974_36940-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR038377 |
| DBxref | InterPro:IPR001734 |
| DBxref | PFAM:PF00474 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000005.1 | supercontig | OGUI01000005.1:1224035..1226074 + |
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