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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000005.1:1610250..1610768- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_38240-T1 ID=ATCC64974_38240-T1|Name=ATCC64974_38240-T1|organism=Aspergillus niger N402|type=mRNA|length=519bp|location=Sequence derived from alignment at OGUI01000005.1:1610250..1610768- (Aspergillus niger N402)
ATGCTTAACTGCATCGACAACTCCGGCGCCGCCGTTGTCGAGTGCGTGAA
TGTCCTGAAGAAGAAGCGCCCCGCCACCGTTGGTACGATAACCCGCTCTT
TTCCATTCACTATTCAAAGGAATAACACTGATGTTGGGGTTCCGGGATGA
ACAGGTGACCGCATCGTGGTCGTGGTCCAGAAGCAACGAAATTTCGGCCC
CGACAGCAGCAACAACGTCGGTATTGCAAACAAGGTTCGCCGAGGAGACA
TTCGCCATGCCGTCGTCGTCCGCGCGGCCAAGGAAATGCAGCGTCCGGAT
GGTTCGATCGTCAAGTTCGATGATAACGCCTGTGTTCTCGTCAACAAGTC
CGGAGACCCCATCGGAACAAGAATGAACGGTCAGTCTAGGCGTACAGACT
ACGGCATCACATGGAAAGGATTGGAACGTCTTTACTGACATATACTAGGT
GTCGTGGCTACGGAACTACGAGGACGACAGTGGTCGAAGATCCTGTCGTT
GGCGCCGATGCATGTGTAG back to topCoding sequence (CDS) from alignment at OGUI01000005.1:1610250..1610768- >ATCC64974_38240-T1 ID=ATCC64974_38240-T1|Name=ATCC64974_38240-T1|organism=Aspergillus niger N402|type=CDS|length=1134bp|location=Sequence derived from alignment at OGUI01000005.1:1610250..1610768- (Aspergillus niger N402)
GTGTCGTGGCTACGGAACTACGAGGACGACAGTGGTCGAAGATCCTGTCG
TTGGCGCCGATGCATGTGTAGGTGACCGCATCGTGGTCGTGGTCCAGAAG
CAACGAAATTTCGGCCCCGACAGCAGCAACAACGTCGGTATTGCAAACAA
GGTTCGCCGAGGAGACATTCGCCATGCCGTCGTCGTCCGCGCGGCCAAGG
AAATGCAGCGTCCGGATGGTTCGATCGTCAAGTTCGATGATAACGCCTGT
GTTCTCGTCAACAAGTCCGGAGACCCCATCGGAACAAGAATGAACGATGC
TTAACTGCATCGACAACTCCGGCGCCGCCGTTGTCGAGTGCGTGAATGTC
CTGAAGAAGAAGCGCCCCGCCACCGTTGGTGTCGTGGCTACGGAACTACG
AGGACGACAGTGGTCGAAGATCCTGTCGTTGGCGCCGATGCATGTGTAGG
TGACCGCATCGTGGTCGTGGTCCAGAAGCAACGAAATTTCGGCCCCGACA
GCAGCAACAACGTCGGTATTGCAAACAAGGTTCGCCGAGGAGACATTCGC
CATGCCGTCGTCGTCCGCGCGGCCAAGGAAATGCAGCGTCCGGATGGTTC
GATCGTCAAGTTCGATGATAACGCCTGTGTTCTCGTCAACAAGTCCGGAG
ACCCCATCGGAACAAGAATGAACGATGCTTAACTGCATCGACAACTCCGG
CGCCGCCGTTGTCGAGTGCGTGAATGTCCTGAAGAAGAAGCGCCCCGCCA
CCGTTGGTGTCGTGGCTACGGAACTACGAGGACGACAGTGGTCGAAGATC
CTGTCGTTGGCGCCGATGCATGTGTAGGTGACCGCATCGTGGTCGTGGTC
CAGAAGCAACGAAATTTCGGCCCCGACAGCAGCAACAACGTCGGTATTGC
AAACAAGGTTCGCCGAGGAGACATTCGCCATGCCGTCGTCGTCCGCGCGG
CCAAGGAAATGCAGCGTCCGGATGGTTCGATCGTCAAGTTCGATGATAAC
GCCTGTGTTCTCGTCAACAAGTCCGGAGACCCCATCGGAACAAGAATGAA
CGATGCTTAACTGCATCGACAACTCCGGCGCCGCCGTTGTCGAGTGCGTG
AATGTCCTGAAGAAGAAGCGCCCCGCCACCGTTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0015934 | large ribosomal subunit |
| GO:0005840 | ribosome |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_38240-T1 | ATCC64974_38240-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| Note | BUSCO:EOG09265HP0 |
| DBxref | InterPro:IPR019972 |
| DBxref | InterPro:IPR036853 |
| DBxref | InterPro:IPR005745 |
| DBxref | InterPro:IPR000218 |
| DBxref | PFAM:PF00238 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000005.1 | supercontig | OGUI01000005.1:1610250..1610768 - |
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