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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000005.1:1691012..1691663- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_38490-T1 ID=ATCC64974_38490-T1|Name=ATCC64974_38490-T1|organism=Aspergillus niger N402|type=mRNA|length=652bp|location=Sequence derived from alignment at OGUI01000005.1:1691012..1691663- (Aspergillus niger N402)
ATGCCCCGCGCCCTCAAGCATCACGAAAAGAAACTCCTCCGCAAAGTCGA
CTTCCACGTCTACAAATCCGACAACAACCACCGGGAATCTCAAATCCGCA
CGCGCTATCACCTGCAAGACCCCCTCGACTACCGCAAATACAACCAGCTA
TGCGGATCCCTGCGTCAACTCGCGCACAAGTTGTCTGAGCTCGACCCCGA
GAGTGATCCCGTGCGCAAGAAGCTGGAATCCGAGGTGCTGGATAAGTTGT
TCCGCATGGGGATTCTGAAGCAGAGTCGCGAACAGGGGGCGGGACTTTCG
AGAGTCGAGAGGGAGGTTACGGTTAGTGCGTTTTGTAGGAGGAGGTTGGC
GGTTTGGATGACTAGGAGTGGGATGGTGGAGAATGTTAAGACTGTAAGTC
CTTCTCTTTTTTTTATCAACCTTCTTGGCGATGGGGTATTGGGTTGGGAT
TTAGGCTAATGAGGCTGGGTGGTGTTAGGCTGTCACTTTCATCGAGCAGG
GCCATGTTCGCGTCGGGACAGAGGTCGTTACGGATCCGGCGTACTTGGTT
ACGAGAAATCTGGAGGATTTCGTGACGTGGGTGGATAGCTCCAAGATTAA
GAGGAGTATTATGCAGTATCGGGATAATTTGGATGATTTTGATATGTTGT
GA back to topCoding sequence (CDS) from alignment at OGUI01000005.1:1691012..1691663- >ATCC64974_38490-T1 ID=ATCC64974_38490-T1|Name=ATCC64974_38490-T1|organism=Aspergillus niger N402|type=CDS|length=1134bp|location=Sequence derived from alignment at OGUI01000005.1:1691012..1691663- (Aspergillus niger N402)
GCTGTCACTTTCATCGAGCAGGGCCATGTTCGCGTCGGGACAGAGGTCGT
TACGGATCCGGCGTACTTGGTTACGAGAAATCTGGAGGATTTCGTGACGT
GGGTGGATAGCTCCAAGATTAAGAGGAGTATTATGCAGTATCGGGATAAT
TTGGATGATTTTGATATGTTGTGAATGCCCCGCGCCCTCAAGCATCACGA
AAAGAAACTCCTCCGCAAAGTCGACTTCCACGTCTACAAATCCGACAACA
ACCACCGGGAATCTCAAATCCGCACGCGCTATCACCTGCAAGACCCCCTC
GACTACCGCAAATACAACCAGCTATGCGGATCCCTGCGTCAACTCGCGCA
CAAGTTGTCTGAGCTCGACCCCGAGAGTGATCCCGTGCGCAAGAAGCTGG
AATCCGAGGTGCTGGATAAGTTGTTCCGCATGGGGATTCTGAAGCAGAGT
CGCGAACAGGGGGCGGGACTTTCGAGAGTCGAGAGGGAGGTTACGGTTAG
TGCGTTTTGTAGGAGGAGGTTGGCGGTTTGGATGACTAGGAGTGGGATGG
TGGAGAATGTTAAGACTGCTGTCACTTTCATCGAGCAGGGCCATGTTCGC
GTCGGGACAGAGGTCGTTACGGATCCGGCGTACTTGGTTACGAGAAATCT
GGAGGATTTCGTGACGTGGGTGGATAGCTCCAAGATTAAGAGGAGTATTA
TGCAGTATCGGGATAATTTGGATGATTTTGATATGTTGTGAATGCCCCGC
GCCCTCAAGCATCACGAAAAGAAACTCCTCCGCAAAGTCGACTTCCACGT
CTACAAATCCGACAACAACCACCGGGAATCTCAAATCCGCACGCGCTATC
ACCTGCAAGACCCCCTCGACTACCGCAAATACAACCAGCTATGCGGATCC
CTGCGTCAACTCGCGCACAAGTTGTCTGAGCTCGACCCCGAGAGTGATCC
CGTGCGCAAGAAGCTGGAATCCGAGGTGCTGGATAAGTTGTTCCGCATGG
GGATTCTGAAGCAGAGTCGCGAACAGGGGGCGGGACTTTCGAGAGTCGAG
AGGGAGGTTACGGTTAGTGCGTTTTGTAGGAGGAGGTTGGCGGTTTGGAT
GACTAGGAGTGGGATGGTGGAGAATGTTAAGACT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003723 | RNA binding |
| GO:0019843 | rRNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_38490-T1 | ATCC64974_38490-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264Y0W |
| DBxref | InterPro:IPR036986 |
| DBxref | InterPro:IPR002942 |
| DBxref | InterPro:IPR001912 |
| DBxref | PFAM:PF01479 |
| DBxref | PFAM:PF00163 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000005.1 | supercontig | OGUI01000005.1:1691012..1691663 - |
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