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ATCC64974_38600-T1, ATCC64974_38600-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_38600-T1
Unique NameATCC64974_38600-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000005.1:1719990..1721211+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_38600-T1 ID=ATCC64974_38600-T1|Name=ATCC64974_38600-T1|organism=Aspergillus niger N402|type=mRNA|length=1222bp|location=Sequence derived from alignment at OGUI01000005.1:1719990..1721211+ (Aspergillus niger N402)
ATGCCGCCACCATCACTTCTGCAGCTCTGCACGGCGACTGCGATTAGGAA
CGTGAAACGTATGCAGAGCCCAATCCCACCTTGACAAGAGCCCATCGGTA
AACTGATACTAAGTGCTCGTGCAGAATTAAATGATATTGGCAACATTCCC
TATGTACTCGCTCGTCCATTTCTACTGAAAGTGGAGAGTCCTGAGAAACT
GGTGAGTCTGCAGCGGAACCCCCCCGTCCTTCGTCAGTAACCCTTTGGCT
AACAGTCAAACTCACCCCACAACACAGAGAACTCTGGAATTACAGTCCCC
ACATTTGATGCGAGATGACGAGGAACTCTGGCTGGAGTTCATCAAAAGAG
ATATCCCGCGATGGGACGAATACGATCTGCCTGAGAAACCCGATTGTTGG
TATGACGTATATTGTGACCTCCGGGAACAAGTCCAACGGGCAGTGGAAGA
GGATGCTGAAAAGCTGAAGATGGCTTTAGATGGCATCAGCTCGGAGCGCC
AGGAAAAAAGTGCCAAATTCGTTACCGATCGTCGAATCATCGGTCTCCCC
CGAGAGAGGCCGACCGCGAGGCAACGATATGCTTCGTACGATCGGAGACT
GGGCGGCTCGCCGACGTCGTCATCTTCCATGACCCCCTGGGCTTTTGGTA
GGCCAAGAGAAACAAAGAAAAAGAACAGCATATTTACAGCAACAAAGAGG
AATAATGTTCTTACTGTGCCAACAAAGCACCTTAATAACAGAGCTTCCCA
GGTCAGACAGGCTCCGCGGTCTCTGATCGAGGACCATATACGTCCTGCTG
AGCCCCCTGTCGCTCGACGAAAGGAGGCTCCAGCTCTGAGAGCGCCCGGT
CGGTCACGGCCCCAGATGAGTGCTCCCTCCACAAGCCAGAATAGTCTGGA
AGTTGGTCCCAGCTTGCGGGAAAGAGAGGCTCGTTTACGAGCAATAACCC
AATCGCATAGCCCTGCTGCAGCCAGTAAGCCTATGGCAGGGAGAAATGCA
CAGACATCGCTGCCAACAAGAGGTCCATCCGGATCTCTATCAGGGGTAGC
GGCCAAGAAACAGACATCCCATCCGCTCAGTAACAGTGCGACTGGCTCTC
ATCGGGGGTCTGCCGTAGAGGACATGCCAGCGTCTCCGCCACAACCACCC
CGTCCGGCAGTTGTCCGCAAACGTCCTGCCCCGAACCTCTTTATCCAACC
AAAGAAGAAGAAACTGAACTGA
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Coding sequence (CDS) from alignment at OGUI01000005.1:1719990..1721211+

>ATCC64974_38600-T1 ID=ATCC64974_38600-T1|Name=ATCC64974_38600-T1|organism=Aspergillus niger N402|type=CDS|length=3240bp|location=Sequence derived from alignment at OGUI01000005.1:1719990..1721211+ (Aspergillus niger N402)
ATGCCGCCACCATCACTTCTGCAGCTCTGCACGGCGACTGCGATTAGGAA
CGTGAAACAATTAAATGATATTGGCAACATTCCCTATGTACTCGCTCGTC
CATTTCTACTGAAAGTGGAGAGTCCTGAGAAACTGAGAACTCTGGAATTA
CAGTCCCCACATTTGATGCGAGATGACGAGGAACTCTGGCTGGAGTTCAT
CAAAAGAGATATCCCGCGATGGGACGAATACGATCTGCCTGAGAAACCCG
ATTGTTGGTATGACGTATATTGTGACCTCCGGGAACAAGTCCAACGGGCA
GTGGAAGAGGATGCTGAAAAGCTGAAGATGGCTTTAGATGGCATCAGCTC
GGAGCGCCAGGAAAAAAGTGCCAAATTCGTTACCGATCGTCGAATCATCG
GTCTCCCCCGAGAGAGGCCGACCGCGAGGCAACGATATGCTTCGTACGAT
CGGAGACTGGGCGGCTCGCCGACGTCGTCATCTTCCATGACCCCCTGGGC
TTTTGGTAGGCCAAGAGAAACAAAGAAAAAGAACAGCATATTTACAGCAA
CAAAGAGGAATAATGTTCTTACTGTGCCAACAAAGCACCTTAATAACAGA
GCTTCCCAGGTCAGACAGGCTCCGCGGTCTCTGATCGAGGACCATATACG
TCCTGCTGAGCCCCCTGTCGCTCGACGAAAGGAGGCTCCAGCTCTGAGAG
CGCCCGGTCGGTCACGGCCCCAGATGAGTGCTCCCTCCACAAGCCAGAAT
AGTCTGGAAGTTGGTCCCAGCTTGCGGGAAAGAGAGGCTCGTTTACGAGC
AATAACCCAATCGCATAGCCCTGCTGCAGCCAGTAAGCCTATGGCAGGGA
GAAATGCACAGACATCGCTGCCAACAAGAGGTCCATCCGGATCTCTATCA
GGGGTAGCGGCCAAGAAACAGACATCCCATCCGCTCAGTAACAGTGCGAC
TGGCTCTCATCGGGGGTCTGCCGTAGAGGACATGCCAGCGTCTCCGCCAC
AACCACCCCGTCCGGCAGTTGTCCGCAAACGTCCTGCCCCGAACCTCTTT
ATCCAACCAAAGAAGAAGAAACTGAACTGAATGCCGCCACCATCACTTCT
GCAGCTCTGCACGGCGACTGCGATTAGGAACGTGAAACAATTAAATGATA
TTGGCAACATTCCCTATGTACTCGCTCGTCCATTTCTACTGAAAGTGGAG
AGTCCTGAGAAACTGAGAACTCTGGAATTACAGTCCCCACATTTGATGCG
AGATGACGAGGAACTCTGGCTGGAGTTCATCAAAAGAGATATCCCGCGAT
GGGACGAATACGATCTGCCTGAGAAACCCGATTGTTGGTATGACGTATAT
TGTGACCTCCGGGAACAAGTCCAACGGGCAGTGGAAGAGGATGCTGAAAA
GCTGAAGATGGCTTTAGATGGCATCAGCTCGGAGCGCCAGGAAAAAAGTG
CCAAATTCGTTACCGATCGTCGAATCATCGGTCTCCCCCGAGAGAGGCCG
ACCGCGAGGCAACGATATGCTTCGTACGATCGGAGACTGGGCGGCTCGCC
GACGTCGTCATCTTCCATGACCCCCTGGGCTTTTGGTAGGCCAAGAGAAA
CAAAGAAAAAGAACAGCATATTTACAGCAACAAAGAGGAATAATGTTCTT
ACTGTGCCAACAAAGCACCTTAATAACAGAGCTTCCCAGGTCAGACAGGC
TCCGCGGTCTCTGATCGAGGACCATATACGTCCTGCTGAGCCCCCTGTCG
CTCGACGAAAGGAGGCTCCAGCTCTGAGAGCGCCCGGTCGGTCACGGCCC
CAGATGAGTGCTCCCTCCACAAGCCAGAATAGTCTGGAAGTTGGTCCCAG
CTTGCGGGAAAGAGAGGCTCGTTTACGAGCAATAACCCAATCGCATAGCC
CTGCTGCAGCCAGTAAGCCTATGGCAGGGAGAAATGCACAGACATCGCTG
CCAACAAGAGGTCCATCCGGATCTCTATCAGGGGTAGCGGCCAAGAAACA
GACATCCCATCCGCTCAGTAACAGTGCGACTGGCTCTCATCGGGGGTCTG
CCGTAGAGGACATGCCAGCGTCTCCGCCACAACCACCCCGTCCGGCAGTT
GTCCGCAAACGTCCTGCCCCGAACCTCTTTATCCAACCAAAGAAGAAGAA
ACTGAACTGAATGCCGCCACCATCACTTCTGCAGCTCTGCACGGCGACTG
CGATTAGGAACGTGAAACAATTAAATGATATTGGCAACATTCCCTATGTA
CTCGCTCGTCCATTTCTACTGAAAGTGGAGAGTCCTGAGAAACTGAGAAC
TCTGGAATTACAGTCCCCACATTTGATGCGAGATGACGAGGAACTCTGGC
TGGAGTTCATCAAAAGAGATATCCCGCGATGGGACGAATACGATCTGCCT
GAGAAACCCGATTGTTGGTATGACGTATATTGTGACCTCCGGGAACAAGT
CCAACGGGCAGTGGAAGAGGATGCTGAAAAGCTGAAGATGGCTTTAGATG
GCATCAGCTCGGAGCGCCAGGAAAAAAGTGCCAAATTCGTTACCGATCGT
CGAATCATCGGTCTCCCCCGAGAGAGGCCGACCGCGAGGCAACGATATGC
TTCGTACGATCGGAGACTGGGCGGCTCGCCGACGTCGTCATCTTCCATGA
CCCCCTGGGCTTTTGGTAGGCCAAGAGAAACAAAGAAAAAGAACAGCATA
TTTACAGCAACAAAGAGGAATAATGTTCTTACTGTGCCAACAAAGCACCT
TAATAACAGAGCTTCCCAGGTCAGACAGGCTCCGCGGTCTCTGATCGAGG
ACCATATACGTCCTGCTGAGCCCCCTGTCGCTCGACGAAAGGAGGCTCCA
GCTCTGAGAGCGCCCGGTCGGTCACGGCCCCAGATGAGTGCTCCCTCCAC
AAGCCAGAATAGTCTGGAAGTTGGTCCCAGCTTGCGGGAAAGAGAGGCTC
GTTTACGAGCAATAACCCAATCGCATAGCCCTGCTGCAGCCAGTAAGCCT
ATGGCAGGGAGAAATGCACAGACATCGCTGCCAACAAGAGGTCCATCCGG
ATCTCTATCAGGGGTAGCGGCCAAGAAACAGACATCCCATCCGCTCAGTA
ACAGTGCGACTGGCTCTCATCGGGGGTCTGCCGTAGAGGACATGCCAGCG
TCTCCGCCACAACCACCCCGTCCGGCAGTTGTCCGCAAACGTCCTGCCCC
GAACCTCTTTATCCAACCAAAGAAGAAGAAACTGAACTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0070449elongin complex
Vocabulary: Biological Process
TermDefinition
GO:0006357regulation of transcription by RNA polymerase II
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_38600ATCC64974_38600Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_38600-T1.exon1ATCC64974_38600-T1.exon1Aspergillus niger N402exon
ATCC64974_38600-T1.exon2ATCC64974_38600-T1.exon2Aspergillus niger N402exon
ATCC64974_38600-T1.exon3ATCC64974_38600-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_38600-T1.cdsATCC64974_38600-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_38600-T1ATCC64974_38600-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR010684
DBxrefPFAM:PF06881
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000005.1supercontigOGUI01000005.1:1719990..1721211 +
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