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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000005.1:1721861..1722455- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_38610-T1 ID=ATCC64974_38610-T1|Name=ATCC64974_38610-T1|organism=Aspergillus niger N402|type=mRNA|length=595bp|location=Sequence derived from alignment at OGUI01000005.1:1721861..1722455- (Aspergillus niger N402)
ATGTTGATCAAGTGAGTTGTTGTCCGCCCATGACGCACGCAGATACCCTC
TGTCGCGATAGCAAAGCTAATCGGCGTCAACCTCCAGAGTCCGTACCCTT
ACTGGCAAGGAGATCGAGTTGGACATCGAGCCGGATTACAAGGTACATAC
ACACATCTACACATCCACAGACATATATATGTCTTTGCAATCTCGCCCCA
TCCGCGTGTGGTGATTGTTAGCTGGTCTTACTAGCCGGCTGCAACAACTC
CGCTCGCACACGACCAGCCACCCACCCCACGGACCTATGATACTTTCTTC
CGCGCAGTCGCTAACAAGTACATATGCAGGTGTCCCGGATAAAGGAGCGT
GTTGAAGAGAAAGAGGGTATTCCTCCTGTTCAGCAGCGATTGATTTTCGG
TGGAAAGCAGATGTACGCATACACCCGTTTCCCTATTCCTACACTTGGGG
ATGTATAATCGCTATGCTTTGGGCCAAATACTGATAAAGGGACTTTCATG
AATATAGGGCCGACGACAAGACTGCATCGGAATATAACCTGGAAGGTGGT
GCCACGCTACACCTTGTTCTTGCTCTGCGTGGTGGATGCTTGTGA back to topCoding sequence (CDS) from alignment at OGUI01000005.1:1721861..1722455- >ATCC64974_38610-T1 ID=ATCC64974_38610-T1|Name=ATCC64974_38610-T1|organism=Aspergillus niger N402|type=CDS|length=948bp|location=Sequence derived from alignment at OGUI01000005.1:1721861..1722455- (Aspergillus niger N402)
GGCCGACGACAAGACTGCATCGGAATATAACCTGGAAGGTGGTGCCACGC
TACACCTTGTTCTTGCTCTGCGTGGTGGATGCTTGTGAGTGTCCCGGATA
AAGGAGCGTGTTGAAGAGAAAGAGGGTATTCCTCCTGTTCAGCAGCGATT
GATTTTCGGTGGAAAGCAGATAGTCCGTACCCTTACTGGCAAGGAGATCG
AGTTGGACATCGAGCCGGATTACAAGATGTTGATCAAGGCCGACGACAAG
ACTGCATCGGAATATAACCTGGAAGGTGGTGCCACGCTACACCTTGTTCT
TGCTCTGCGTGGTGGATGCTTGTGAGTGTCCCGGATAAAGGAGCGTGTTG
AAGAGAAAGAGGGTATTCCTCCTGTTCAGCAGCGATTGATTTTCGGTGGA
AAGCAGATAGTCCGTACCCTTACTGGCAAGGAGATCGAGTTGGACATCGA
GCCGGATTACAAGATGTTGATCAAGGCCGACGACAAGACTGCATCGGAAT
ATAACCTGGAAGGTGGTGCCACGCTACACCTTGTTCTTGCTCTGCGTGGT
GGATGCTTGTGAGTGTCCCGGATAAAGGAGCGTGTTGAAGAGAAAGAGGG
TATTCCTCCTGTTCAGCAGCGATTGATTTTCGGTGGAAAGCAGATAGTCC
GTACCCTTACTGGCAAGGAGATCGAGTTGGACATCGAGCCGGATTACAAG
ATGTTGATCAAGGCCGACGACAAGACTGCATCGGAATATAACCTGGAAGG
TGGTGCCACGCTACACCTTGTTCTTGCTCTGCGTGGTGGATGCTTGTGAG
TGTCCCGGATAAAGGAGCGTGTTGAAGAGAAAGAGGGTATTCCTCCTGTT
CAGCAGCGATTGATTTTCGGTGGAAAGCAGATAGTCCGTACCCTTACTGG
CAAGGAGATCGAGTTGGACATCGAGCCGGATTACAAGATGTTGATCAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_38610-T1 | ATCC64974_38610-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029071 |
| DBxref | InterPro:IPR038738 |
| DBxref | InterPro:IPR019954 |
| DBxref | InterPro:IPR000626 |
| DBxref | InterPro:IPR019956 |
| DBxref | PFAM:PF00240 |
| DBxref | PFAM:PF11976 |
| Product | nedd8-conjugating enzyme UBE2F |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000005.1 | supercontig | OGUI01000005.1:1721861..1722455 - |
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