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ATCC64974_38630-T1, ATCC64974_38630-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_38630-T1
Unique NameATCC64974_38630-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000005.1:1724376..1725316+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_38630-T1 ID=ATCC64974_38630-T1|Name=ATCC64974_38630-T1|organism=Aspergillus niger N402|type=mRNA|length=941bp|location=Sequence derived from alignment at OGUI01000005.1:1724376..1725316+ (Aspergillus niger N402)
ATGGTAAGAATATTGTTCTGATCGTCTATCAGTCTCGTTTCCGTGTTCCT
GGGCGTCGGAGAAGTGTTTTCGGTCAATCGGCATATTGCGAGATGGGACG
ACATACGGCACTCTTTTCCTACGGCGAACCGAGTTGAAAGCCGCCACTAT
ACGAAGCGCAACGATCGAAGCTGCAAACGAAAATCCTGAACCGTCAATAT
CAATACAAAAATGGTCAAAGATGATGGAATTCTCGACCGGGGTTTGCCCC
GCGATCAATTGTGGGATTGAAGTGAAAGATGTTGAGTGCGACCGAAACCA
TCAAAATCGAATTGTTCTGAGCCACGACACCCTTGCTATACCATCATCTG
CTTTTCCTCACTTTCTCGGAACAATATCATTCCCACCGTGAACCACCATC
TCCGACGACGAGGAACTCAGGAACAGGCTGCGGACGTTGTGTGATAACCA
TCCTACCACAGCAGGCGCTGATCAAACTCTTCTCGCATTCAGGTCAACGT
TCCGAAAACCCGCCGGACGTACTGCAAGTCCAAGGAGTGCCACAAGCACA
CCCAGCACAAGGTCACCCAGTACAAGGCTGGAAAGGTGAACACTGCCCAA
GCAACCGAGCCCACCGCGCGACCTATGCTGATGCAATCATGATCTCTACA
GGCCTCCCTGTTCGCCCAGGGTAAGCGTCGTTACGACCGGAAGCAGAGCG
GTTATGGTGGTCAGACCAAGCCCGTCTTCCACAAGAAGGCCAAGACCACC
AAGAAGATCGTCCTTCGTCTTGAGTGCACTGCTTGCAAGACCAAGAAGCA
GCTTTCTCTGAAGCGCTGCAAGCACTTCGAGCTTGGGTACGTTCATACGC
TCGGCATACGATCTATGGGTGATGCTAACCATCTCTCTTCTTTTTCAACA
GTGGTGACAAGAAGACCAAGGGTGCTGCTCTTGTCTTCTAA
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Coding sequence (CDS) from alignment at OGUI01000005.1:1724376..1725316+

>ATCC64974_38630-T1 ID=ATCC64974_38630-T1|Name=ATCC64974_38630-T1|organism=Aspergillus niger N402|type=CDS|length=1284bp|location=Sequence derived from alignment at OGUI01000005.1:1724376..1725316+ (Aspergillus niger N402)
ATGGTCAACGTTCCGAAAACCCGCCGGACGTACTGCAAGTCCAAGGAGTG
CCACAAGCACACCCAGCACAAGGTCACCCAGTACAAGGCTGGAAAGGCCT
CCCTGTTCGCCCAGGGTAAGCGTCGTTACGACCGGAAGCAGAGCGGTTAT
GGTGGTCAGACCAAGCCCGTCTTCCACAAGAAGGCCAAGACCACCAAGAA
GATCGTCCTTCGTCTTGAGTGCACTGCTTGCAAGACCAAGAAGCAGCTTT
CTCTGAAGCGCTGCAAGCACTTCGAGCTTGGTGGTGACAAGAAGACCAAG
GGTGCTGCTCTTGTCTTCTAAATGGTCAACGTTCCGAAAACCCGCCGGAC
GTACTGCAAGTCCAAGGAGTGCCACAAGCACACCCAGCACAAGGTCACCC
AGTACAAGGCTGGAAAGGCCTCCCTGTTCGCCCAGGGTAAGCGTCGTTAC
GACCGGAAGCAGAGCGGTTATGGTGGTCAGACCAAGCCCGTCTTCCACAA
GAAGGCCAAGACCACCAAGAAGATCGTCCTTCGTCTTGAGTGCACTGCTT
GCAAGACCAAGAAGCAGCTTTCTCTGAAGCGCTGCAAGCACTTCGAGCTT
GGTGGTGACAAGAAGACCAAGGGTGCTGCTCTTGTCTTCTAAATGGTCAA
CGTTCCGAAAACCCGCCGGACGTACTGCAAGTCCAAGGAGTGCCACAAGC
ACACCCAGCACAAGGTCACCCAGTACAAGGCTGGAAAGGCCTCCCTGTTC
GCCCAGGGTAAGCGTCGTTACGACCGGAAGCAGAGCGGTTATGGTGGTCA
GACCAAGCCCGTCTTCCACAAGAAGGCCAAGACCACCAAGAAGATCGTCC
TTCGTCTTGAGTGCACTGCTTGCAAGACCAAGAAGCAGCTTTCTCTGAAG
CGCTGCAAGCACTTCGAGCTTGGTGGTGACAAGAAGACCAAGGGTGCTGC
TCTTGTCTTCTAAATGGTCAACGTTCCGAAAACCCGCCGGACGTACTGCA
AGTCCAAGGAGTGCCACAAGCACACCCAGCACAAGGTCACCCAGTACAAG
GCTGGAAAGGCCTCCCTGTTCGCCCAGGGTAAGCGTCGTTACGACCGGAA
GCAGAGCGGTTATGGTGGTCAGACCAAGCCCGTCTTCCACAAGAAGGCCA
AGACCACCAAGAAGATCGTCCTTCGTCTTGAGTGCACTGCTTGCAAGACC
AAGAAGCAGCTTTCTCTGAAGCGCTGCAAGCACTTCGAGCTTGGTGGTGA
CAAGAAGACCAAGGGTGCTGCTCTTGTCTTCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL44ATCC64974_38630Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_38630-T1.exon1ATCC64974_38630-T1.exon1Aspergillus niger N402exon
ATCC64974_38630-T1.exon2ATCC64974_38630-T1.exon2Aspergillus niger N402exon
ATCC64974_38630-T1.exon3ATCC64974_38630-T1.exon3Aspergillus niger N402exon
ATCC64974_38630-T1.exon4ATCC64974_38630-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_38630-T1.cdsATCC64974_38630-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_38630-T1ATCC64974_38630-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09265JX6
DBxrefInterPro:IPR011332
DBxrefInterPro:IPR000552
DBxrefPFAM:PF00935
Product40s ribosomal protein L44e
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000005.1supercontigOGUI01000005.1:1724376..1725316 +
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