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ATCC64974_38730-T1, ATCC64974_38730-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_38730-T1
Unique NameATCC64974_38730-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000005.1:1798046..1799299-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_38730-T1 ID=ATCC64974_38730-T1|Name=ATCC64974_38730-T1|organism=Aspergillus niger N402|type=mRNA|length=1254bp|location=Sequence derived from alignment at OGUI01000005.1:1798046..1799299- (Aspergillus niger N402)
ATGCGCCGTTGCGGCTCCCGGCGGTGTTCCCCGGATCGGGACAAGCGTCT
GGGGCACGAACCCTAACAGAGGGTTTTGCTGGTCTCGCTTAGCAGACACA
ACCGCTTAGCTAATCAGCCGCCGTATCTCAAACTCCTCGCCCTGGGAATT
CTACCCGTCGACGAGTGCAACGAACATCATCCGCCAACGACCGTCGATAC
GCCGACATCAAGATGTGAGTCCATCTTCAGCTCTTGATTTTTGCTGCATC
AAGGGGGGAAAATACTGTTCGTCGCTGGACTGTATATCCTCCCCCTCTTC
CCCCGTTCAGACGCCCCGGATTCGCCTCCAGATGGCACTTTTTCGTGTCA
TACGCAGCAGCAACCCCCCGATCGGTTTGGACTTCATGCTGACCGACTGC
TTTTTTTTGCACCACACAGGGTCAACCTTCGCACCCAGAAGCGCCTCGCC
GCCTCCGTGGTGGGCTGCGGCAAGCGCAAGATTTGGCTCGACCCCAATGA
GATGAATGAGATCTCCAACGCCAACTCCCGCCAGACCATCCGCAAGCTCG
TCAGCGATGGCCTCATCATCCGCAAGCCCGTCACCATGCACTCCCGCTCC
CGTGCCCGTGAGCTCGCCGCCGCCCGCCGCATCGGCAGACACCGTGGTCT
GGGTAAGCGCAAGGGTACCAAGGAGGCTCGTATGCCCAGGTATGCTCGTT
GTCCAACCCCTTTGAGTGCCATTGCAAGGATTTTCTCGGTCGCCCACGAC
TATCAGCGAGATGCCATATGCGAAGGAAAATGATAAAATGGATGAGTGCT
GATGGATATCGGATTAAAGCCAGATCCTCTGGATGCGCCGCATGCGTATT
CTCCGTCGCCTGCTCGTCCGCTACCGTGCCTCCGGCAAGATCGACAAGCA
CCTGTACCACGAGCTCTACCACCTGAGCAAGGGTAACACCTTCAAGCACA
AGCGTTCCCTCATCGAGCACGTAAGTTTCGCCGCCATTTGCTTTTTTGAT
GAAATCGCTATACTCTCGAGACTACGAAACGGAACGAGTGTATACGGTCT
TCTGTTGGGAAGATGAGGAAATAGGGGCTAACATGATCTCTTTCCATACT
ACAGATCCAGAAGGCCAAGGCTGAGCGTCACCGTGAGCGCGTCCTCAAGG
AGGAGATGGATGCTAAGCGTGCCAAGAACAAGGCTCTCCGTGAGAGACGT
CTGGAGCGCAAGGAGGCCAAGCAGAACGCCCTCATTGCTGAGGCTCAGGA
GTAA
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Coding sequence (CDS) from alignment at OGUI01000005.1:1798046..1799299-

>ATCC64974_38730-T1 ID=ATCC64974_38730-T1|Name=ATCC64974_38730-T1|organism=Aspergillus niger N402|type=CDS|length=3570bp|location=Sequence derived from alignment at OGUI01000005.1:1798046..1799299- (Aspergillus niger N402)
ATCCAGAAGGCCAAGGCTGAGCGTCACCGTGAGCGCGTCCTCAAGGAGGA
GATGGATGCTAAGCGTGCCAAGAACAAGGCTCTCCGTGAGAGACGTCTGG
AGCGCAAGGAGGCCAAGCAGAACGCCCTCATTGCTGAGGCTCAGGAGTAA
CCAGATCCTCTGGATGCGCCGCATGCGTATTCTCCGTCGCCTGCTCGTCC
GCTACCGTGCCTCCGGCAAGATCGACAAGCACCTGTACCACGAGCTCTAC
CACCTGAGCAAGGGTAACACCTTCAAGCACAAGCGTTCCCTCATCGAGCA
CGGTCAACCTTCGCACCCAGAAGCGCCTCGCCGCCTCCGTGGTGGGCTGC
GGCAAGCGCAAGATTTGGCTCGACCCCAATGAGATGAATGAGATCTCCAA
CGCCAACTCCCGCCAGACCATCCGCAAGCTCGTCAGCGATGGCCTCATCA
TCCGCAAGCCCGTCACCATGCACTCCCGCTCCCGTGCCCGTGAGCTCGCC
GCCGCCCGCCGCATCGGCAGACACCGTGGTCTGGGTAAGCGCAAGGGTAC
CAAGGAGGCTCGTATGCCCAGCCGCCGTATCTCAAACTCCTCGCCCTGGG
AATTCTACCCGTCGACGAGTGCAACGAACATCATCCGCCAACGACCGTCG
ATACGCCGACATCAAGATATGCGCCGTTGCGGCTCCCGGCGGTGTTCCCC
GGATCGGGACAAGCATCCAGAAGGCCAAGGCTGAGCGTCACCGTGAGCGC
GTCCTCAAGGAGGAGATGGATGCTAAGCGTGCCAAGAACAAGGCTCTCCG
TGAGAGACGTCTGGAGCGCAAGGAGGCCAAGCAGAACGCCCTCATTGCTG
AGGCTCAGGAGTAACCAGATCCTCTGGATGCGCCGCATGCGTATTCTCCG
TCGCCTGCTCGTCCGCTACCGTGCCTCCGGCAAGATCGACAAGCACCTGT
ACCACGAGCTCTACCACCTGAGCAAGGGTAACACCTTCAAGCACAAGCGT
TCCCTCATCGAGCACGGTCAACCTTCGCACCCAGAAGCGCCTCGCCGCCT
CCGTGGTGGGCTGCGGCAAGCGCAAGATTTGGCTCGACCCCAATGAGATG
AATGAGATCTCCAACGCCAACTCCCGCCAGACCATCCGCAAGCTCGTCAG
CGATGGCCTCATCATCCGCAAGCCCGTCACCATGCACTCCCGCTCCCGTG
CCCGTGAGCTCGCCGCCGCCCGCCGCATCGGCAGACACCGTGGTCTGGGT
AAGCGCAAGGGTACCAAGGAGGCTCGTATGCCCAGCCGCCGTATCTCAAA
CTCCTCGCCCTGGGAATTCTACCCGTCGACGAGTGCAACGAACATCATCC
GCCAACGACCGTCGATACGCCGACATCAAGATATGCGCCGTTGCGGCTCC
CGGCGGTGTTCCCCGGATCGGGACAAGCATCCAGAAGGCCAAGGCTGAGC
GTCACCGTGAGCGCGTCCTCAAGGAGGAGATGGATGCTAAGCGTGCCAAG
AACAAGGCTCTCCGTGAGAGACGTCTGGAGCGCAAGGAGGCCAAGCAGAA
CGCCCTCATTGCTGAGGCTCAGGAGTAACCAGATCCTCTGGATGCGCCGC
ATGCGTATTCTCCGTCGCCTGCTCGTCCGCTACCGTGCCTCCGGCAAGAT
CGACAAGCACCTGTACCACGAGCTCTACCACCTGAGCAAGGGTAACACCT
TCAAGCACAAGCGTTCCCTCATCGAGCACGGTCAACCTTCGCACCCAGAA
GCGCCTCGCCGCCTCCGTGGTGGGCTGCGGCAAGCGCAAGATTTGGCTCG
ACCCCAATGAGATGAATGAGATCTCCAACGCCAACTCCCGCCAGACCATC
CGCAAGCTCGTCAGCGATGGCCTCATCATCCGCAAGCCCGTCACCATGCA
CTCCCGCTCCCGTGCCCGTGAGCTCGCCGCCGCCCGCCGCATCGGCAGAC
ACCGTGGTCTGGGTAAGCGCAAGGGTACCAAGGAGGCTCGTATGCCCAGC
CGCCGTATCTCAAACTCCTCGCCCTGGGAATTCTACCCGTCGACGAGTGC
AACGAACATCATCCGCCAACGACCGTCGATACGCCGACATCAAGATATGC
GCCGTTGCGGCTCCCGGCGGTGTTCCCCGGATCGGGACAAGCATCCAGAA
GGCCAAGGCTGAGCGTCACCGTGAGCGCGTCCTCAAGGAGGAGATGGATG
CTAAGCGTGCCAAGAACAAGGCTCTCCGTGAGAGACGTCTGGAGCGCAAG
GAGGCCAAGCAGAACGCCCTCATTGCTGAGGCTCAGGAGTAACCAGATCC
TCTGGATGCGCCGCATGCGTATTCTCCGTCGCCTGCTCGTCCGCTACCGT
GCCTCCGGCAAGATCGACAAGCACCTGTACCACGAGCTCTACCACCTGAG
CAAGGGTAACACCTTCAAGCACAAGCGTTCCCTCATCGAGCACGGTCAAC
CTTCGCACCCAGAAGCGCCTCGCCGCCTCCGTGGTGGGCTGCGGCAAGCG
CAAGATTTGGCTCGACCCCAATGAGATGAATGAGATCTCCAACGCCAACT
CCCGCCAGACCATCCGCAAGCTCGTCAGCGATGGCCTCATCATCCGCAAG
CCCGTCACCATGCACTCCCGCTCCCGTGCCCGTGAGCTCGCCGCCGCCCG
CCGCATCGGCAGACACCGTGGTCTGGGTAAGCGCAAGGGTACCAAGGAGG
CTCGTATGCCCAGCCGCCGTATCTCAAACTCCTCGCCCTGGGAATTCTAC
CCGTCGACGAGTGCAACGAACATCATCCGCCAACGACCGTCGATACGCCG
ACATCAAGATATGCGCCGTTGCGGCTCCCGGCGGTGTTCCCCGGATCGGG
ACAAGCATCCAGAAGGCCAAGGCTGAGCGTCACCGTGAGCGCGTCCTCAA
GGAGGAGATGGATGCTAAGCGTGCCAAGAACAAGGCTCTCCGTGAGAGAC
GTCTGGAGCGCAAGGAGGCCAAGCAGAACGCCCTCATTGCTGAGGCTCAG
GAGTAACCAGATCCTCTGGATGCGCCGCATGCGTATTCTCCGTCGCCTGC
TCGTCCGCTACCGTGCCTCCGGCAAGATCGACAAGCACCTGTACCACGAG
CTCTACCACCTGAGCAAGGGTAACACCTTCAAGCACAAGCGTTCCCTCAT
CGAGCACGGTCAACCTTCGCACCCAGAAGCGCCTCGCCGCCTCCGTGGTG
GGCTGCGGCAAGCGCAAGATTTGGCTCGACCCCAATGAGATGAATGAGAT
CTCCAACGCCAACTCCCGCCAGACCATCCGCAAGCTCGTCAGCGATGGCC
TCATCATCCGCAAGCCCGTCACCATGCACTCCCGCTCCCGTGCCCGTGAG
CTCGCCGCCGCCCGCCGCATCGGCAGACACCGTGGTCTGGGTAAGCGCAA
GGGTACCAAGGAGGCTCGTATGCCCAGCCGCCGTATCTCAAACTCCTCGC
CCTGGGAATTCTACCCGTCGACGAGTGCAACGAACATCATCCGCCAACGA
CCGTCGATACGCCGACATCAAGATATGCGCCGTTGCGGCTCCCGGCGGTG
TTCCCCGGATCGGGACAAGC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0022625cytosolic large ribosomal subunit
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_38730ATCC64974_38730Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_38730-T1ATCC64974_38730-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_38730-T1.cdsATCC64974_38730-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_38730-T1.exon5ATCC64974_38730-T1.exon5Aspergillus niger N402exon
ATCC64974_38730-T1.exon4ATCC64974_38730-T1.exon4Aspergillus niger N402exon
ATCC64974_38730-T1.exon3ATCC64974_38730-T1.exon3Aspergillus niger N402exon
ATCC64974_38730-T1.exon2ATCC64974_38730-T1.exon2Aspergillus niger N402exon
ATCC64974_38730-T1.exon1ATCC64974_38730-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR035970
DBxrefInterPro:IPR033935
DBxrefInterPro:IPR023638
DBxrefInterPro:IPR015972
DBxrefInterPro:IPR000196
DBxrefPFAM:PF01280
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000005.1supercontigOGUI01000005.1:1798046..1799299 -
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