ATCC64974_38990-T1, ATCC64974_38990-T1 (mRNA) Aspergillus niger N402

Overview


Name	ATCC64974_38990-T1
Unique Name	ATCC64974_38990-T1
Type	mRNA
Organism	Aspergillus niger N402

Sequences

The following sequences are available for this feature:

mRNA from alignment at OGUI01000005.1:1911805..1913340-
coding sequence from alignment at OGUI01000005.1:1911805..1913340-

mRNA from alignment at OGUI01000005.1:1911805..1913340-

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>ATCC64974_38990-T1 ID=ATCC64974_38990-T1|Name=ATCC64974_38990-T1|organism=Aspergillus niger N402|type=mRNA|length=1536bp|location=Sequence derived from alignment at OGUI01000005.1:1911805..1913340- (Aspergillus niger N402)
ATGGGCTCTAATCCGGATGATGTTGGCAGACAGAAGTCACAATCCTCTCA
GAAAGGAGGCCTTCCACAGCATGATGGAATATTGACGCCGGATGCTACTC
GATCGGCTTCGAAGTCGCAGAGTGGTACATTATTGCCGACTCACAATGAG
AAAGGACACCGACGGCACCATAGTCTGTTTCGAATCGATACCGCTGGAGA
GAGTGGGCGTACTGGCGTCCATCCACTTCACTTCCTGCGCGTTTGTTTTC
GGAGCACCTGTACTCTTTCCATGTTGGTGAACGTCCTCTGGCCTTTCGTT
CCAGCTGCGATTGCTCTTCATTTCGCTCGGCCGGACCTTCATGTTTGGAT
ATTTGCCCTCAACTATATCGCAATGGTACCTTCAGCGAACTTGCTTGGAT
TCGCGGGTGGCGAGCTAGCCAAGAAGCTGCCCAAGGTATTCGGTGTCTTG
CTGGAGACCTTTCTCAGTTCCGTTGTGGAAATCGTCCTTTTCATGGTTCT
GATCCACAAGGACAGGGGAGGCAATCTGATCCCTGTTATTCAAGCCGCCA
TTCTAGGCTCTATCCTGGCGAACCTCCTTCTCTGCTTAGGCCTATGCTTT
TTCTTTGGAGGCATTGGGCGTGAAGATCAATCATTCCATGAGGCCGTCAG
CGAAGTAGGCTCAGGACTCCTGCTAGTGGCAGGGTTTGGCCTTCTGATCC
CGAGTGCCTTCTATTCGACTTTGAAAAGCAATGCATCGCATACACATGTA
CAAATCTCGACAGAAACACTGAATCAGTCTACACTGATCATTAGCAGAGC
CACAGCCGTCATACTCCTAGTGGCTTTTATCATGTATGTTGTCGTGTCCC
GAGATAGTTTTATGGATCTGTCTACTCACATGCTTTAGGTATCTGTTCTA
CAACCTCCATAGCCATCATAGCATATTCGACGAAGTCCTTGAATTCGACG
AGCATTTGGATGAAGATCGCGAACGGGAAATGAAGCGGGCAAAGCTTACG
TTAATTGAATGCTTTGTTGCCATTGCAATAGCTCTTGCATGCGTCTGCAT
GTCGGCCGTCTTTCTGGTGGAGGAAATAGAGGATATTGTGAATGAGAGAG
GTGTATCAGACAACTTCATGGGCCTTATTCTTGTGCCGCTTGTTGAGAAG
GCAGCAGAGCACTTGACTGCTATCGATGAAGCCTGGTAATTACATCCATT
GGCGACTGTTTACTCCGCATCTTCTGACTCCGAAATAGGGACAATCAGAT
TAATTTTGCACTCTTCCACTGCCTGGGACCGTCGATACAGACTGCGCTGT
TGAACGCACCGCTTGCAGTCATTGTGGGTTGGGGCATTGGCAAGGACATG
GGTCTGAATTTCGAGATCTTCATGATCGTTTTGGTCGTTTTGTCCATCTT
AGTTGTTGGAAACTTTCTTCGAGATGGCAAGTCCAACTATTTGGAAGGAG
GGCTCTGCGTTCTGGTCTACGTTATTATCGCCGTCACTACATGGTACTAT
CCTCAGATTGTAGTGGAGGGCGAGGCTGAGGCATGA

Coding sequence (CDS) from alignment at OGUI01000005.1:1911805..1913340-

>ATCC64974_38990-T1 ID=ATCC64974_38990-T1|Name=ATCC64974_38990-T1|organism=Aspergillus niger N402|type=CDS|length=4284bp|location=Sequence derived from alignment at OGUI01000005.1:1911805..1913340- (Aspergillus niger N402)
GGACAATCAGATTAATTTTGCACTCTTCCACTGCCTGGGACCGTCGATAC
AGACTGCGCTGTTGAACGCACCGCTTGCAGTCATTGTGGGTTGGGGCATT
GGCAAGGACATGGGTCTGAATTTCGAGATCTTCATGATCGTTTTGGTCGT
TTTGTCCATCTTAGTTGTTGGAAACTTTCTTCGAGATGGCAAGTCCAACT
ATTTGGAAGGAGGGCTCTGCGTTCTGGTCTACGTTATTATCGCCGTCACT
ACATGGTACTATCCTCAGATTGTAGTGGAGGGCGAGGCTGAGGCATGAGT
ATCTGTTCTACAACCTCCATAGCCATCATAGCATATTCGACGAAGTCCTT
GAATTCGACGAGCATTTGGATGAAGATCGCGAACGGGAAATGAAGCGGGC
AAAGCTTACGTTAATTGAATGCTTTGTTGCCATTGCAATAGCTCTTGCAT
GCGTCTGCATGTCGGCCGTCTTTCTGGTGGAGGAAATAGAGGATATTGTG
AATGAGAGAGGTGTATCAGACAACTTCATGGGCCTTATTCTTGTGCCGCT
TGTTGAGAAGGCAGCAGAGCACTTGACTGCTATCGATGAAGCCTGATGGG
CTCTAATCCGGATGATGTTGGCAGACAGAAGTCACAATCCTCTCAGAAAG
GAGGCCTTCCACAGCATGATGGAATATTGACGCCGGATGCTACTCGATCG
GCTTCGAAGTCGCAGAGTGGTACATTATTGCCGACTCACAATGAGAAAGG
ACACCGACGGCACCATAGTCTGTTTCGAATCGATACCGCTGGAGAGAGTG
GGCGTACTGGCGTCCATCCACTTCACTTCCTGCGCGTTTGTTTTCGGAGC
ACCTGTACTCTTTCCATGTTGGTGAACGTCCTCTGGCCTTTCGTTCCAGC
TGCGATTGCTCTTCATTTCGCTCGGCCGGACCTTCATGTTTGGATATTTG
CCCTCAACTATATCGCAATGGTACCTTCAGCGAACTTGCTTGGATTCGCG
GGTGGCGAGCTAGCCAAGAAGCTGCCCAAGGTATTCGGTGTCTTGCTGGA
GACCTTTCTCAGTTCCGTTGTGGAAATCGTCCTTTTCATGGTTCTGATCC
ACAAGGACAGGGGAGGCAATCTGATCCCTGTTATTCAAGCCGCCATTCTA
GGCTCTATCCTGGCGAACCTCCTTCTCTGCTTAGGCCTATGCTTTTTCTT
TGGAGGCATTGGGCGTGAAGATCAATCATTCCATGAGGCCGTCAGCGAAG
TAGGCTCAGGACTCCTGCTAGTGGCAGGGTTTGGCCTTCTGATCCCGAGT
GCCTTCTATTCGACTTTGAAAAGCAATGCATCGCATACACATGTACAAAT
CTCGACAGAAACACTGAATCAGTCTACACTGATCATTAGCAGAGCCACAG
CCGTCATACTCCTAGTGGCTTTTATCATGGACAATCAGATTAATTTTGCA
CTCTTCCACTGCCTGGGACCGTCGATACAGACTGCGCTGTTGAACGCACC
GCTTGCAGTCATTGTGGGTTGGGGCATTGGCAAGGACATGGGTCTGAATT
TCGAGATCTTCATGATCGTTTTGGTCGTTTTGTCCATCTTAGTTGTTGGA
AACTTTCTTCGAGATGGCAAGTCCAACTATTTGGAAGGAGGGCTCTGCGT
TCTGGTCTACGTTATTATCGCCGTCACTACATGGTACTATCCTCAGATTG
TAGTGGAGGGCGAGGCTGAGGCATGAGTATCTGTTCTACAACCTCCATAG
CCATCATAGCATATTCGACGAAGTCCTTGAATTCGACGAGCATTTGGATG
AAGATCGCGAACGGGAAATGAAGCGGGCAAAGCTTACGTTAATTGAATGC
TTTGTTGCCATTGCAATAGCTCTTGCATGCGTCTGCATGTCGGCCGTCTT
TCTGGTGGAGGAAATAGAGGATATTGTGAATGAGAGAGGTGTATCAGACA
ACTTCATGGGCCTTATTCTTGTGCCGCTTGTTGAGAAGGCAGCAGAGCAC
TTGACTGCTATCGATGAAGCCTGATGGGCTCTAATCCGGATGATGTTGGC
AGACAGAAGTCACAATCCTCTCAGAAAGGAGGCCTTCCACAGCATGATGG
AATATTGACGCCGGATGCTACTCGATCGGCTTCGAAGTCGCAGAGTGGTA
CATTATTGCCGACTCACAATGAGAAAGGACACCGACGGCACCATAGTCTG
TTTCGAATCGATACCGCTGGAGAGAGTGGGCGTACTGGCGTCCATCCACT
TCACTTCCTGCGCGTTTGTTTTCGGAGCACCTGTACTCTTTCCATGTTGG
TGAACGTCCTCTGGCCTTTCGTTCCAGCTGCGATTGCTCTTCATTTCGCT
CGGCCGGACCTTCATGTTTGGATATTTGCCCTCAACTATATCGCAATGGT
ACCTTCAGCGAACTTGCTTGGATTCGCGGGTGGCGAGCTAGCCAAGAAGC
TGCCCAAGGTATTCGGTGTCTTGCTGGAGACCTTTCTCAGTTCCGTTGTG
GAAATCGTCCTTTTCATGGTTCTGATCCACAAGGACAGGGGAGGCAATCT
GATCCCTGTTATTCAAGCCGCCATTCTAGGCTCTATCCTGGCGAACCTCC
TTCTCTGCTTAGGCCTATGCTTTTTCTTTGGAGGCATTGGGCGTGAAGAT
CAATCATTCCATGAGGCCGTCAGCGAAGTAGGCTCAGGACTCCTGCTAGT
GGCAGGGTTTGGCCTTCTGATCCCGAGTGCCTTCTATTCGACTTTGAAAA
GCAATGCATCGCATACACATGTACAAATCTCGACAGAAACACTGAATCAG
TCTACACTGATCATTAGCAGAGCCACAGCCGTCATACTCCTAGTGGCTTT
TATCATGGACAATCAGATTAATTTTGCACTCTTCCACTGCCTGGGACCGT
CGATACAGACTGCGCTGTTGAACGCACCGCTTGCAGTCATTGTGGGTTGG
GGCATTGGCAAGGACATGGGTCTGAATTTCGAGATCTTCATGATCGTTTT
GGTCGTTTTGTCCATCTTAGTTGTTGGAAACTTTCTTCGAGATGGCAAGT
CCAACTATTTGGAAGGAGGGCTCTGCGTTCTGGTCTACGTTATTATCGCC
GTCACTACATGGTACTATCCTCAGATTGTAGTGGAGGGCGAGGCTGAGGC
ATGAGTATCTGTTCTACAACCTCCATAGCCATCATAGCATATTCGACGAA
GTCCTTGAATTCGACGAGCATTTGGATGAAGATCGCGAACGGGAAATGAA
GCGGGCAAAGCTTACGTTAATTGAATGCTTTGTTGCCATTGCAATAGCTC
TTGCATGCGTCTGCATGTCGGCCGTCTTTCTGGTGGAGGAAATAGAGGAT
ATTGTGAATGAGAGAGGTGTATCAGACAACTTCATGGGCCTTATTCTTGT
GCCGCTTGTTGAGAAGGCAGCAGAGCACTTGACTGCTATCGATGAAGCCT
GATGGGCTCTAATCCGGATGATGTTGGCAGACAGAAGTCACAATCCTCTC
AGAAAGGAGGCCTTCCACAGCATGATGGAATATTGACGCCGGATGCTACT
CGATCGGCTTCGAAGTCGCAGAGTGGTACATTATTGCCGACTCACAATGA
GAAAGGACACCGACGGCACCATAGTCTGTTTCGAATCGATACCGCTGGAG
AGAGTGGGCGTACTGGCGTCCATCCACTTCACTTCCTGCGCGTTTGTTTT
CGGAGCACCTGTACTCTTTCCATGTTGGTGAACGTCCTCTGGCCTTTCGT
TCCAGCTGCGATTGCTCTTCATTTCGCTCGGCCGGACCTTCATGTTTGGA
TATTTGCCCTCAACTATATCGCAATGGTACCTTCAGCGAACTTGCTTGGA
TTCGCGGGTGGCGAGCTAGCCAAGAAGCTGCCCAAGGTATTCGGTGTCTT
GCTGGAGACCTTTCTCAGTTCCGTTGTGGAAATCGTCCTTTTCATGGTTC
TGATCCACAAGGACAGGGGAGGCAATCTGATCCCTGTTATTCAAGCCGCC
ATTCTAGGCTCTATCCTGGCGAACCTCCTTCTCTGCTTAGGCCTATGCTT
TTTCTTTGGAGGCATTGGGCGTGAAGATCAATCATTCCATGAGGCCGTCA
GCGAAGTAGGCTCAGGACTCCTGCTAGTGGCAGGGTTTGGCCTTCTGATC
CCGAGTGCCTTCTATTCGACTTTGAAAAGCAATGCATCGCATACACATGT
ACAAATCTCGACAGAAACACTGAATCAGTCTACACTGATCATTAGCAGAG
CCACAGCCGTCATACTCCTAGTGGCTTTTATCAT

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport
GO:0006816	calcium ion transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0015369	calcium:proton antiporter activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
ATCC64974_38990	ATCC64974_38990	Aspergillus niger N402	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
ATCC64974_38990-T1	ATCC64974_38990-T1-protein	Aspergillus niger N402	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
ATCC64974_38990-T1.cds	ATCC64974_38990-T1.cds	Aspergillus niger N402	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
ATCC64974_38990-T1.exon3	ATCC64974_38990-T1.exon3	Aspergillus niger N402	exon
ATCC64974_38990-T1.exon2	ATCC64974_38990-T1.exon2	Aspergillus niger N402	exon
ATCC64974_38990-T1.exon1	ATCC64974_38990-T1.exon1	Aspergillus niger N402	exon

Properties


Property Name	Value
DBxref	InterPro:IPR004837
DBxref	InterPro:IPR004798
DBxref	PFAM:PF01699
Product	hypothetical protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Aspergillus niger N402 whole genome analysis	2021-11-01

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
OGUI01000005.1	supercontig	OGUI01000005.1:1911805..1913340 -

Main menu

You are here

ATCC64974_38990-T1, ATCC64974_38990-T1 (mRNA) Aspergillus niger N402

Main menu

User login

You are here

ATCC64974_38990-T1, ATCC64974_38990-T1 (mRNA) Aspergillus niger N402